BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0236.0001.p (295 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A1ZR39.1 A1ZR39_9SPHI Putative uncharacterized protein 73 3e-11 A6CJG0.1 A6CJG0_9BACI Putative uncharacterized protein 73 4e-11 C4L2C2.1 C4L2C2_EXISA CHAD domain containing protein 60 2e-07 B1YJ26.1 B1YJ26_EXIS2 Putative uncharacterized protein 59 6e-07 Q7NM71.1 Q7NM71_GLOVI Gll0897 protein 57 2e-06 >A1ZR39.1 A1ZR39_9SPHI Putative uncharacterized protein Length = 323 Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust. Identities = 68/223 (30%), Positives = 96/223 (43%), Gaps = 24/223 (10%) Query: 37 LEAFGDE-DIHQARVNCRKLLTLLSIL--------DPEHLVTADLYSTFKQAQKRLGKVR 87 + AF DE D+HQARV R + TL L DP+ L A L S +Q K LGK+R Sbjct: 58 IYAFEDEEDVHQARVALRTITTLTGFLKSSPHKDIDPKLLNQAHLQS--RQILKALGKIR 115 Query: 88 DADVLIESFKDRHHQAKEAGEAKTAKLLKAVIRHQXXXXXXXXXXLAAGLPKLSGQALNG 147 D DV++ H AG + L++A+ L LPK ++ Sbjct: 116 DFDVMVG-----HVDKINAGSFQLHTLVQAL----RLERKIARIELVLHLPKHLNKSFFK 166 Query: 148 QWEAFLSRDLEGLAAKKDVNVVMRELEVAFEQKKKACKTLFKGPEAESKESFDALHELRI 207 W+ FL L ++L F+++ T +F+ALHE+R+ Sbjct: 167 LWQTFLESYLPLHVQHLKTKRHFKKLHKKFDKRYLNYLTQRDINGTTHPRTFEALHEVRL 226 Query: 208 AAKELRYTASAASFALSQ----KFHAHEDIYKEIQEQLGIIND 246 K LRY + FAL Q YK IQE+LG++ND Sbjct: 227 VTKNLRYAYTYLDFALHQADAKTIKTKVKSYKLIQEELGLMND 269 >A6CJG0.1 A6CJG0_9BACI Putative uncharacterized protein Length = 393 Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust. Identities = 70/249 (28%), Positives = 109/249 (43%), Gaps = 20/249 (8%) Query: 15 ARQWELALNKLYINFCDYSKDALEAFGDEDIHQARVNCRKLLTLLSIL--DPEHLVTADL 72 R+WE L L + Y A+ + E IH++R R+L TL+ + D +H L Sbjct: 128 VRKWEDVLQTLLKKYKHYCDQAINSGDTESIHKSRTKGRRLRTLIHFIGVDKDH----PL 183 Query: 73 YSTFKQAQKRLGKVRDADVLIESFKDRHHQAKEAGEAKTAKLLKAVIRHQXXXXXXXXXX 132 Y K A LGKVR+ DV I SF+ R + + G+ V Sbjct: 184 YKRLKDAHDALGKVREDDVFIHSFEKRA-EMDQYGD---------VYHEFVKVARQDREK 233 Query: 133 LAAGLPKLSGQALNGQW----EAFLSRDLEGLAAKKDVNVVMRELEVAFEQKKKACKTLF 188 L K +A+N ++ FL +L+ D+ +++ E F+ K + Sbjct: 234 HLKKLKKKLPKAINDEFLSLFNNFLQDELKNKLLTLDIPGELQKQEDDFKALVKEYHQVI 293 Query: 189 KGPEAESKESFDALHELRIAAKELRYTASAASFALSQKFHAHEDIYKEIQEQLGIINDKR 248 S DALHE+R AK+LRY + S+ + ++ YK IQ++ G I D R Sbjct: 294 GDKGKTSDVGIDALHEVRKKAKKLRYIYNYLDKLYSKDYKSYSKPYKRIQKKFGEIIDIR 353 Query: 249 VWLEILQSI 257 WLE ++S+ Sbjct: 354 DWLEEVKSL 362 >C4L2C2.1 C4L2C2_EXISA CHAD domain containing protein Length = 257 Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 63/225 (28%), Positives = 103/225 (45%), Gaps = 33/225 (14%) Query: 28 NFCDYSKDALEAFGDEDIHQARVNCRKLLTLLSILDPEHLVTADLYSTFKQAQKRLGKVR 87 F Y +AL EDIH+ARV+ RKL+T + + + + KQ + LG VR Sbjct: 19 TFNHYVTEALTFNNSEDIHRARVHLRKLITFMQLYE----TKPATFRQLKQLMEALGHVR 74 Query: 88 DADVLIESFKDRH---HQAKEAGEAKTAKLLKAVIRHQXXXXXXXXXXLAAGLPKLSGQA 144 D DVLIE F + H EA E + +A+ R L+ + + + Sbjct: 75 DLDVLIEMFDSKSELDHAFFEAMETE-----RAIAR----------TILSTRVSEKMTPS 119 Query: 145 LNGQWEAFLSRDLEGLAAKKDVNVVMRELEVAFEQKKKACKTLFKGPEAESKESFDALHE 204 L+ Q F+ L K + + + LE A ++K+ + + ++ KE +ALH+ Sbjct: 120 LDQQVRRFIGGPLFRAFKKTNASPM---LEKAKSERKQRVRVYHE--QSSGKEQLEALHK 174 Query: 205 LRIAAKELRYTASAASFALSQKFHAHEDIY---KEIQEQLGIIND 246 +R+A K RY + L+ + A D K++Q +LG +ND Sbjct: 175 VRLAVKRERY---LHEYLLNYESDASMDTVRTLKKMQTELGEMND 216 >B1YJ26.1 B1YJ26_EXIS2 Putative uncharacterized protein Length = 260 Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 106/256 (41%), Gaps = 29/256 (11%) Query: 28 NFCDYSKDALEAFGDEDIHQARVNCRKLLTLLSILD----PEHLVTADLYSTFKQAQKRL 83 F Y+++A ED+HQAR+ RKL+T ++D P +L+ L + F Sbjct: 19 TFNHYAEEAQTFKNPEDVHQARIRLRKLITFAKLVDQTEEPIYLIWKRLMAAF------- 71 Query: 84 GKVRDADVLIESFKDRHHQAKEAGEAKTAKLLKAVIRHQXXXXXXXXXXLAAGLPKLSGQ 143 G+VRD DV + + + T+ + + H L + L Sbjct: 72 GQVRDLDVQL------------SQQGVTSPIEQLFAEHLALQLQGKRATLLETMHLLISD 119 Query: 144 ALNGQWEAFLSRDLEGLAAKKDVNVVMRELEVAFEQKKKACKTLFKGPEAESKESFDALH 203 L+ FL+ L + D +++ E F++KK + K E K+ +H Sbjct: 120 ELDRSVRRFLAGRLTKQLKRIDEKDLLQTAEKRFDKKKLHYE---KVQHKEGKKRIQMMH 176 Query: 204 ELRIAAKELRYTASAASFALSQKFHAHEDIYKEIQEQLGIINDKRVWLE--ILQSIGREE 261 ELR+A K RYT + + D K IQ QLG IND LE L S+ ++ Sbjct: 177 ELRLATKFYRYTVEYLR-PYTDFPKSSVDRLKRIQTQLGDINDTYNRLERWRLFSVPDDQ 235 Query: 262 LGAGRKVWTELTDSLS 277 L +K T L LS Sbjct: 236 LAQQQKEITRLEKKLS 251 >Q7NM71.1 Q7NM71_GLOVI Gll0897 protein Length = 536 Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 64/240 (26%), Positives = 100/240 (41%), Gaps = 15/240 (6%) Query: 42 DEDIHQARVNCRKLLTLLSILDPE-HLVTADLYSTFKQAQKRLGKVRDADVLIESFKDRH 100 E +HQ RV R+L + L + +P L + LG VRD DV +E ++R+ Sbjct: 66 PEQLHQMRVGIRRLRSALRLFEPALKLPKPARRRSLSPLAAVLGSVRDLDVQMEMLRERY 125 Query: 101 HQAKEAGEAKTAKLLKAVIRHQXXXXXXXXXXLAAGLPKLSGQALNGQWEAFLSRDLEGL 160 A GE + L+ ++ H + L L + + F LE Sbjct: 126 LGALPEGEQQA---LERLLAHLESLRTQARSAMLRYLDGLDYEQFKSAYTEF----LESP 178 Query: 161 AAKKDVNVVMRELEVAFEQKKKACKTLFKGPEAESKESFDALHELRIAAKELRYTASAAS 220 ++ + + L AF ++A TL+ P E + + +H+LRIA K +RY Sbjct: 179 KFRRGADESLYHLLPAF--LREALSTLWAHPGWEEPD-VETMHDLRIAVKRVRYNLEFFL 235 Query: 221 FALSQKFHAHEDIYKEIQEQLGIINDKRVWLEILQSIGREELGAGRKVWTELTDSLSAEV 280 + + K IQE+LGII+D V L L + E LG W + L+A V Sbjct: 236 GCYGKAVRSLHGELKRIQEELGIIHDCDVLLGQLHT---EPLGPATP-WQQPFSRLTALV 291 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.132 0.371 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,524,786,960 Number of extensions: 55189155 Number of successful extensions: 156441 Number of sequences better than 1.0e-05: 5 Number of HSP's gapped: 156447 Number of HSP's successfully gapped: 5 Length of query: 295 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 161 Effective length of database: 1,798,280,193 Effective search space: 289523111073 Effective search space used: 289523111073 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 131 (55.1 bits)