BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0234.0004.p
         (97 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K4F9.1 B3K4F9_9BACI Putative uncharacterized protein                155   1e-36
Q2B455.1 Q2B455_9BACI Putative uncharacterized protein                131   3e-29
A6CPB9.1 A6CPB9_9BACI Putative uncharacterized protein                126   5e-28
B1DJN6.1 B1DJN6_9BACL Putative uncharacterized protein                122   1e-26
A3IC14.1 A3IC14_9BACI Putative uncharacterized protein                116   6e-25

>B3K4F9.1 B3K4F9_9BACI Putative uncharacterized protein
          Length = 97

 Score =  155 bits (392), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 74/97 (76%), Positives = 87/97 (89%)

Query: 1  MANTLLSIQVIPKTPNNEDSIPYVDKAIEVIQQSGVKHQVNPLETTMEGELSELLEVVRH 60
          MANTLLSIQVIP+TP+  DSIPYVD+AI VIQ+SGVK++V+ LETT+EGELSELL +V  
Sbjct: 1  MANTLLSIQVIPRTPDGGDSIPYVDEAIRVIQESGVKYEVHALETTLEGELSELLMIVER 60

Query: 61 MHEALIASGSPSVISQIKIAHNPSGISMDKLTEKYRP 97
          MHEAL+ +GSPSVISQ+KI H+P GISMDKLTEKYRP
Sbjct: 61 MHEALVKAGSPSVISQVKIVHHPGGISMDKLTEKYRP 97


>Q2B455.1 Q2B455_9BACI Putative uncharacterized protein
          Length = 96

 Score =  131 bits (329), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 79/96 (82%)

Query: 1  MANTLLSIQVIPKTPNNEDSIPYVDKAIEVIQQSGVKHQVNPLETTMEGELSELLEVVRH 60
          MA+TL+SIQ+IPKT N ED IPYVD+AI++I +SGVK++V+PLETTMEGEL EL  ++  
Sbjct: 1  MASTLISIQIIPKTKNGEDVIPYVDEAIKIIAESGVKYEVHPLETTMEGELEELFRIIAR 60

Query: 61 MHEALIASGSPSVISQIKIAHNPSGISMDKLTEKYR 96
          M+E +IA GS +VISQ+KI   P GI+MD LT+KY+
Sbjct: 61 MNERMIAMGSKNVISQVKILFQPDGITMDDLTDKYK 96


>A6CPB9.1 A6CPB9_9BACI Putative uncharacterized protein
          Length = 96

 Score =  126 bits (317), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 60/96 (62%), Positives = 78/96 (81%)

Query: 1  MANTLLSIQVIPKTPNNEDSIPYVDKAIEVIQQSGVKHQVNPLETTMEGELSELLEVVRH 60
          M N+L+SIQ++PKT N ED IPYVD AI VI+ SGVK++V+PLETTMEG L++L+ V+  
Sbjct: 1  MENSLVSIQILPKTRNGEDVIPYVDAAIAVIEDSGVKYEVHPLETTMEGNLTDLMRVIEK 60

Query: 61 MHEALIASGSPSVISQIKIAHNPSGISMDKLTEKYR 96
          M+E +I  GS +VISQ+KI + PSGISM +LTEKYR
Sbjct: 61 MNEKMIEMGSRNVISQVKILYQPSGISMGQLTEKYR 96


>B1DJN6.1 B1DJN6_9BACL Putative uncharacterized protein
          Length = 101

 Score =  122 bits (305), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/96 (60%), Positives = 75/96 (78%), Gaps = 1/96 (1%)

Query: 1  MANTLLSIQVIPKTPNNEDSIPYVDKAIEVIQQSGVKHQVNPLETTMEGELSELLEVVRH 60
          MAN L+SIQ++P TPN E  IP+VD+AIE+I+ SGV ++V PLETTMEGEL +L E+V+ 
Sbjct: 2  MANALVSIQILPTTPNGESVIPFVDRAIEIIKASGVPYRVAPLETTMEGELPQLFEIVQT 61

Query: 61 MHEALIASGSPSVISQIKIAHNPS-GISMDKLTEKY 95
          M+EA+   G PSVISQ+KI  NP+ G SM +L EKY
Sbjct: 62 MNEAMTEMGCPSVISQVKIYFNPANGASMGRLLEKY 97


>A3IC14.1 A3IC14_9BACI Putative uncharacterized protein
          Length = 97

 Score =  116 bits (291), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 54/96 (56%), Positives = 76/96 (79%)

Query: 1  MANTLLSIQVIPKTPNNEDSIPYVDKAIEVIQQSGVKHQVNPLETTMEGELSELLEVVRH 60
          MAN+L+S+Q+IPKT   ED IPYVD AI VI  SGVK++V+PLETTMEGEL+ LL+++  
Sbjct: 1  MANSLISVQIIPKTEKYEDVIPYVDAAIAVINASGVKYEVHPLETTMEGELTTLLQIIEK 60

Query: 61 MHEALIASGSPSVISQIKIAHNPSGISMDKLTEKYR 96
          M+  ++  G+ +VI+Q+KI + P+GI+M  LTEKY+
Sbjct: 61 MNIKMVELGAINVITQVKILYQPNGITMATLTEKYQ 96


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.310    0.128    0.345 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 538,103,768
Number of extensions: 17618815
Number of successful extensions: 48045
Number of sequences better than 1.0e-05: 173
Number of HSP's gapped: 48080
Number of HSP's successfully gapped: 173
Length of query: 97
Length of database: 3,060,696,203
Length adjustment: 66
Effective length of query: 31
Effective length of database: 2,438,909,213
Effective search space: 75606185603
Effective search space used: 75606185603
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 125 (52.8 bits)