BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0232.0009.p
         (199 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KJA4.1 B3KJA4_9BACI Putative uncharacterized protein                295   2e-78
B1DBS5.1 B1DBS5_9BACL Putative uncharacterized protein                228   2e-58

>B3KJA4.1 B3KJA4_9BACI Putative uncharacterized protein
          Length = 224

 Score =  295 bits (754), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 138/186 (74%), Positives = 158/186 (84%), Gaps = 1/186 (0%)

Query: 15  CSGNTGSVFHTDTESTDSVS-RVPWDYRVVEGTVGDLIGSDMTVLPDNEMLPNDGNYATG 73
           CSG + +VFHT +E   S S RVPWDYR++EGTVGDLIG DMTVLPDNE+LPND NYATG
Sbjct: 39  CSGGSSTVFHTGSEEVSSTSSRVPWDYRIIEGTVGDLIGGDMTVLPDNELLPNDNNYATG 98

Query: 74  DKIWTLQFMDAELVTDADQKNDIRLSSWTTIKSYADQKTAAEDLTRLKVSITTDVDLVGV 133
           DKIWTLQFMDAEL TDA+Q+NDIRLS+W T+KS+ D+KTA  DL  LKV++ TDV LVGV
Sbjct: 99  DKIWTLQFMDAELTTDANQRNDIRLSTWQTLKSFKDKKTAESDLANLKVTVKTDVKLVGV 158

Query: 134 YKTEYKNKTRNFAVVELPSGNRIKQPIDDKRYKALEKQKKASVVLEEVHDFADYDSAYAK 193
           YKT YK  TR+FAVVELP+GNRIKQPID+KRY A+EK+    VVLEEVHDFADYD AYAK
Sbjct: 159 YKTTYKKDTRHFAVVELPTGNRIKQPIDEKRYAAMEKKDTVDVVLEEVHDFADYDLAYAK 218

Query: 194 FRGWAN 199
           FRGWA+
Sbjct: 219 FRGWAD 224


>B1DBS5.1 B1DBS5_9BACL Putative uncharacterized protein
          Length = 218

 Score =  228 bits (582), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 110/196 (56%), Positives = 141/196 (71%), Gaps = 12/196 (6%)

Query: 15  CSGNTGSVFHTD--TESTDS----------VSRVPWDYRVVEGTVGDLIGSDMTVLPDNE 62
           C+ N   V+ T   T S D+          V  VPWDYR+VE  VGDL+GSDMT++PDN 
Sbjct: 22  CTNNPDYVYSTSNYTSSQDTAVASAAPVNPVRNVPWDYRIVEEKVGDLVGSDMTIIPDNT 81

Query: 63  MLPNDGNYATGDKIWTLQFMDAELVTDADQKNDIRLSSWTTIKSYADQKTAAEDLTRLKV 122
           +LPNDGNYATGDK+W LQ+MDA L TD D+++ I+LSSW T+KS+ D+K+A  DL  LK 
Sbjct: 82  LLPNDGNYATGDKVWILQYMDAMLTTDDDRRSQIKLSSWDTLKSFKDEKSALADLGNLKE 141

Query: 123 SITTDVDLVGVYKTEYKNKTRNFAVVELPSGNRIKQPIDDKRYKALEKQKKASVVLEEVH 182
           SI T+V+L+GVYKTE   KTR FAV+ LPSGN +KQPI D++Y AL+ + K  V +E+VH
Sbjct: 142 SIQTEVNLIGVYKTENAGKTREFAVLTLPSGNVVKQPISDEKYAALKSKSKVKVTIEQVH 201

Query: 183 DFADYDSAYAKFRGWA 198
            + DYD  Y+KFRGWA
Sbjct: 202 LYDDYDQVYSKFRGWA 217


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.313    0.130    0.378 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,138,939,059
Number of extensions: 46076907
Number of successful extensions: 81619
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 81618
Number of HSP's successfully gapped: 2
Length of query: 199
Length of database: 3,060,696,203
Length adjustment: 129
Effective length of query: 70
Effective length of database: 1,845,385,268
Effective search space: 129176968760
Effective search space used: 129176968760
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 127 (53.5 bits)