BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0232.0008.p
         (133 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KJA5.1 B3KJA5_9BACI Putative uncharacterized protein                183   4e-45
B1DBS6.1 B1DBS6_9BACL Putative uncharacterized protein                177   3e-43
Q8CV15.1 Q8CV15_OCEIH Hypothetical conserved protein                   90   8e-17
B1YJY4.1 B1YJY4_EXIS2 Putative uncharacterized protein                 89   1e-16
C4L4C9.1 C4L4C9_EXISA Putative uncharacterized protein                 86   7e-16

>B3KJA5.1 B3KJA5_9BACI Putative uncharacterized protein
          Length = 130

 Score =  183 bits (465), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 83/114 (72%), Positives = 104/114 (91%)

Query: 20  LQVLGMVVFTLMTPFKDMDELKKGNVAVALALGGKFLATAIILGVAAYTNTSIWFMMLWF 79
           LQ+LGM++F+ MT F DM+ELKKGNVAV LA GGKF+ATAIILG++AYTN+SIW M+LWF
Sbjct: 17  LQLLGMLIFSWMTRFNDMEELKKGNVAVGLAFGGKFMATAIILGISAYTNSSIWHMILWF 76

Query: 80  AVGYVCLIAAYWIFELFTPGFKISDHLKQGNVAVGVMLCLVFVGTAFAVSSLII 133
           AVGYVCLI AYW+FEL TPG +IS+HL++GNVA+G++L +VF+GTAFA+SSLII
Sbjct: 77  AVGYVCLIVAYWVFELATPGLRISEHLQKGNVAIGILLAMVFIGTAFAISSLII 130


>B1DBS6.1 B1DBS6_9BACL Putative uncharacterized protein
          Length = 130

 Score =  177 bits (449), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 81/114 (71%), Positives = 101/114 (88%)

Query: 20  LQVLGMVVFTLMTPFKDMDELKKGNVAVALALGGKFLATAIILGVAAYTNTSIWFMMLWF 79
           LQ+ GM+ F+LMTPF D++ELKKGN+AV LA GGKFL+TA+I+GVAAYTNTSIW MMLWF
Sbjct: 17  LQLAGMLFFSLMTPFNDLEELKKGNMAVGLAFGGKFLSTALIVGVAAYTNTSIWNMMLWF 76

Query: 80  AVGYVCLIAAYWIFELFTPGFKISDHLKQGNVAVGVMLCLVFVGTAFAVSSLII 133
            VGY  L+A+YWIFEL TPG +IS+HL++GN+A+G +LC VF+GT+FAVSSLII
Sbjct: 77  LVGYFILVASYWIFELVTPGIRISEHLQKGNIAIGALLCFVFIGTSFAVSSLII 130


>Q8CV15.1 Q8CV15_OCEIH Hypothetical conserved protein
          Length = 131

 Score = 89.7 bits (221), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 49/116 (42%), Positives = 72/116 (62%), Gaps = 1/116 (0%)

Query: 18  ILLQVLGMVVFTLMT-PFKDMDELKKGNVAVALALGGKFLATAIILGVAAYTNTSIWFMM 76
           I++ + G+ +F  MT  +KDM+E+K GNVAVAL++ GK +   IIL  A Y +      +
Sbjct: 15  IIIVLAGLFIFENMTRKYKDMEEVKNGNVAVALSVIGKIVGICIILSFAIYNSGRFTDTI 74

Query: 77  LWFAVGYVCLIAAYWIFELFTPGFKISDHLKQGNVAVGVMLCLVFVGTAFAVSSLI 132
           +W  VG    + AYW+F+LFT  F + D LK+ N+AVGVM   V +G AF + + I
Sbjct: 75  IWGIVGVALQMIAYWLFDLFTRNFSVEDELKKNNIAVGVMSVGVSIGLAFVIGASI 130


>B1YJY4.1 B1YJY4_EXIS2 Putative uncharacterized protein
          Length = 135

 Score = 89.0 bits (219), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 72/115 (62%)

Query: 19  LLQVLGMVVFTLMTPFKDMDELKKGNVAVALALGGKFLATAIILGVAAYTNTSIWFMMLW 78
           LL ++G+ +F L T +++ + +K GN+AVALA GGK +  A I+  A  +   +  + L 
Sbjct: 20  LLIIMGLALFELTTRYRNWEHIKSGNIAVALATGGKIIGLANIVHFAVQSEQRVGAIFLE 79

Query: 79  FAVGYVCLIAAYWIFELFTPGFKISDHLKQGNVAVGVMLCLVFVGTAFAVSSLII 133
            A G++ LI+ YWIFE  TP   +   +++GN+AVG++ C + +G ++ + S ++
Sbjct: 80  SAFGFLLLISTYWIFEFLTPNLPVDREIEKGNIAVGIISCSLSIGMSYVIGSALV 134


>C4L4C9.1 C4L4C9_EXISA Putative uncharacterized protein
          Length = 136

 Score = 86.3 bits (212), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 73/115 (63%)

Query: 19  LLQVLGMVVFTLMTPFKDMDELKKGNVAVALALGGKFLATAIILGVAAYTNTSIWFMMLW 78
           L+ V+G+ +F + TP+ +  E++KGN+AVALA GGK +  A I  V    + S   + + 
Sbjct: 21  LMIVVGLAIFEVTTPYSNWREIQKGNIAVALATGGKIVGLANIFRVVESHHDSTIDIFVG 80

Query: 79  FAVGYVCLIAAYWIFELFTPGFKISDHLKQGNVAVGVMLCLVFVGTAFAVSSLII 133
              G++ L+A YW+FE  TP  K++D +++GN+AVG++  L+ +G +  V + ++
Sbjct: 81  GGFGFILLLATYWLFEFLTPTLKVNDEIQKGNIAVGLLAFLLSIGVSLVVGAALV 135


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.332    0.144    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 720,966,256
Number of extensions: 26419471
Number of successful extensions: 117611
Number of sequences better than 1.0e-05: 126
Number of HSP's gapped: 117648
Number of HSP's successfully gapped: 126
Length of query: 133
Length of database: 3,060,696,203
Length adjustment: 98
Effective length of query: 35
Effective length of database: 2,137,436,733
Effective search space: 74810285655
Effective search space used: 74810285655
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)
S2: 125 (52.8 bits)