BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0232.0003.p (416 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DA55.1 B1DA55_9BACL Glycosyl transferase family 2 680 0.0 Q92EC7.1 Q92EC7_LISIN Lin0533 protein 636 e-180 B8DA97.1 B8DA97_LISMH Glycosyl transferase, group 2 family protein 635 e-180 Q723C1.1 Q723C1_LISMF Glycosyl transferase, group 2 family protein 635 e-180 A0AFX5.1 A0AFX5_LISW6 Complete genome 634 e-180 >B1DA55.1 B1DA55_9BACL Glycosyl transferase family 2 Length = 417 Score = 680 bits (1754), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/417 (79%), Positives = 358/417 (85%), Gaps = 1/417 (0%) Query: 1 MTISDVLMVIAVICIWSLLLVNVALIIAGYLYYIKTENEDVPEI-KGEYPFVTIMVPAHN 59 MTI D+LMVI V+CIWSLLLVN+ALIIAGY YYIK ENE PE+ GE PFV+IMVPAHN Sbjct: 1 MTIPDILMVICVLCIWSLLLVNIALIIAGYFYYIKLENEKPPELLPGEEPFVSIMVPAHN 60 Query: 60 EGVVISKTVESLLALDYPHDRYEIIVINDNSSDNSAELLGRIQSRQPERNLIIINTDAVT 119 EG VI KTVESLLALDYPHDRYEIIVINDNSSDNS+ LLG++Q + RNLIIINTD VT Sbjct: 61 EGKVIVKTVESLLALDYPHDRYEIIVINDNSSDNSSVLLGQLQEKYKGRNLIIINTDNVT 120 Query: 120 GGKGKSNALNIGFTRSRGELIAIYDADNTPERTALRYLVAEIMNDATLGAVIGKFRTRNR 179 GGKGKSNALNIGFTRS+GELIAIYDADNTPERTALRYLVAEI+NDA LGAVIGKFRTRNR Sbjct: 121 GGKGKSNALNIGFTRSKGELIAIYDADNTPERTALRYLVAEIVNDAKLGAVIGKFRTRNR 180 Query: 180 DASLLTRFINIETLSFQWMAQAGRWKLFKLCTIPGTNFIMRRSIVESIGGWDVKAIAEDT 239 D +LLTRFINIETLSFQWMAQAGRWKLFKLCTIPGTNFIMRR I+E+IGGWD KAIAEDT Sbjct: 181 DQNLLTRFINIETLSFQWMAQAGRWKLFKLCTIPGTNFIMRRHIIEAIGGWDTKAIAEDT 240 Query: 240 EISFRIYMMGYRIKFQPKSVTWEQEPQTVKVWFKQRTRWAKGNIYVIVKNIPLLFDRSAA 299 EISFRIYMMGYRIKFQPKSVTWEQEPQT+KVWFKQRTRWAKGNIYVIVKN+PLLF A Sbjct: 241 EISFRIYMMGYRIKFQPKSVTWEQEPQTLKVWFKQRTRWAKGNIYVIVKNVPLLFRPEAR 300 Query: 300 KIRFDXXXXXXXXXXXXXXXXXXXXXXXXHAMGYVHTTIAGLSSFLWLLAIILFVVGIFV 359 +IRFD HA+GYVHTTI GLS +LW+LAI LFVVG F+ Sbjct: 301 RIRFDILYFLAIYFLLVTSLLTSDALLILHALGYVHTTIEGLSFYLWILAITLFVVGTFI 360 Query: 360 TLTTEKGEMSLSNLWIILLMYVSYCQLWMVVAAYGLYNYLKDVIFKREAKWYKTERY 416 TL TEKGEM SNL IILLMYV+YCQLWM+VAA G++ YLKDVIFKREAKWYKTER+ Sbjct: 361 TLITEKGEMRPSNLVIILLMYVTYCQLWMLVAANGMFQYLKDVIFKREAKWYKTERF 417 >Q92EC7.1 Q92EC7_LISIN Lin0533 protein Length = 416 Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust. Identities = 301/416 (72%), Positives = 339/416 (81%) Query: 1 MTISDVLMVIAVICIWSLLLVNVALIIAGYLYYIKTENEDVPEIKGEYPFVTIMVPAHNE 60 M ++D L + AV+CIW LLL+N+ LI+AGY+YY+K E VPEI E PFV++MVPAHNE Sbjct: 1 MVVADYLALFAVVCIWGLLLINIVLIVAGYIYYLKNEARKVPEIPAEVPFVSVMVPAHNE 60 Query: 61 GVVISKTVESLLALDYPHDRYEIIVINDNSSDNSAELLGRIQSRQPERNLIIINTDAVTG 120 G VI KTVESLLA DYP DRYEIIVINDNSSDNSAELL IQ++ P R L IINTD VTG Sbjct: 61 GKVIVKTVESLLAFDYPVDRYEIIVINDNSSDNSAELLAAIQAKNPTRQLKIINTDNVTG 120 Query: 121 GKGKSNALNIGFTRSRGELIAIYDADNTPERTALRYLVAEIMNDATLGAVIGKFRTRNRD 180 GKGKSNALNIGF SRGEL+AIYDADNTPER ALR LV EI NDA LGAVIGKFRTRNR+ Sbjct: 121 GKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGEITNDAKLGAVIGKFRTRNRN 180 Query: 181 ASLLTRFINIETLSFQWMAQAGRWKLFKLCTIPGTNFIMRRSIVESIGGWDVKAIAEDTE 240 AS LTRFINIETLSFQWMAQAGRW LFKLCTIPGTNFI+RRS++E IGGWDVKA+AEDTE Sbjct: 181 ASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFIVRRSLLEEIGGWDVKAVAEDTE 240 Query: 241 ISFRIYMMGYRIKFQPKSVTWEQEPQTVKVWFKQRTRWAKGNIYVIVKNIPLLFDRSAAK 300 ISFRIYMMGYRIKFQ K+VTWEQEPQT+ VWFKQR+RWAKGNIYVI+KN+PLLF R + Sbjct: 241 ISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRSRWAKGNIYVILKNVPLLFKREGRR 300 Query: 301 IRFDXXXXXXXXXXXXXXXXXXXXXXXXHAMGYVHTTIAGLSSFLWLLAIILFVVGIFVT 360 +RFD +A+G VHTT+AGLS LWLLAI+LFV G F+T Sbjct: 301 VRFDILYFLSIYFLLLTSLIVSDVLLVLYALGLVHTTLAGLSGALWLLAILLFVAGTFIT 360 Query: 361 LTTEKGEMSLSNLWIILLMYVSYCQLWMVVAAYGLYNYLKDVIFKREAKWYKTERY 416 LTTEKGE+S SNL I+LMYV+YCQLWMVVAAYG + +LKD + KRE KWYKTER+ Sbjct: 361 LTTEKGEISFSNLLFIMLMYVTYCQLWMVVAAYGFFIFLKDTVLKRETKWYKTERF 416 >B8DA97.1 B8DA97_LISMH Glycosyl transferase, group 2 family protein Length = 416 Score = 635 bits (1637), Expect = e-180, Method: Compositional matrix adjust. Identities = 300/416 (72%), Positives = 339/416 (81%) Query: 1 MTISDVLMVIAVICIWSLLLVNVALIIAGYLYYIKTENEDVPEIKGEYPFVTIMVPAHNE 60 M ++D L + AV+CIW LLL+N+ LI+AGY+YY+K E VPEI E PFV++MVPAHNE Sbjct: 1 MVVADYLALFAVVCIWGLLLINIVLIVAGYVYYLKNEARKVPEIPAEVPFVSVMVPAHNE 60 Query: 61 GVVISKTVESLLALDYPHDRYEIIVINDNSSDNSAELLGRIQSRQPERNLIIINTDAVTG 120 G VI KTVESLLA DYP DRYEIIVINDNSSDNSAELL IQ++ P R L IINTD +TG Sbjct: 61 GKVIVKTVESLLAFDYPVDRYEIIVINDNSSDNSAELLAAIQAKNPTRFLKIINTDNITG 120 Query: 121 GKGKSNALNIGFTRSRGELIAIYDADNTPERTALRYLVAEIMNDATLGAVIGKFRTRNRD 180 GKGKSNALNIGF SRGEL+AIYDADNTPER ALR LV EI NDA LGAVIGKFRTRNRD Sbjct: 121 GKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGEITNDAKLGAVIGKFRTRNRD 180 Query: 181 ASLLTRFINIETLSFQWMAQAGRWKLFKLCTIPGTNFIMRRSIVESIGGWDVKAIAEDTE 240 AS LTRFINIETLSFQWMAQAGRW LFKLCTIPGTNFI+RRS++E IGGWDVKA+AEDTE Sbjct: 181 ASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFIVRRSLLEEIGGWDVKAVAEDTE 240 Query: 241 ISFRIYMMGYRIKFQPKSVTWEQEPQTVKVWFKQRTRWAKGNIYVIVKNIPLLFDRSAAK 300 ISFRIYMMGYRIKFQ K+VTWEQEPQT+ VWFKQR+RWAKGNIYVI+KN+PLLF R + Sbjct: 241 ISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRSRWAKGNIYVILKNVPLLFKREGRR 300 Query: 301 IRFDXXXXXXXXXXXXXXXXXXXXXXXXHAMGYVHTTIAGLSSFLWLLAIILFVVGIFVT 360 +RFD +A+G VHTT+AGLS LWLLAI+LF+ G F+T Sbjct: 301 VRFDILYFLSIYFLLLTSLIVSDVLLVLYALGLVHTTLAGLSGALWLLAILLFIAGTFIT 360 Query: 361 LTTEKGEMSLSNLWIILLMYVSYCQLWMVVAAYGLYNYLKDVIFKREAKWYKTERY 416 LTTEKGE+S SNL I+LMYV+YCQLWMVVAAYG + +LKD + KRE KWYKTER+ Sbjct: 361 LTTEKGEISFSNLLFIMLMYVTYCQLWMVVAAYGFFIFLKDTVLKRETKWYKTERF 416 >Q723C1.1 Q723C1_LISMF Glycosyl transferase, group 2 family protein Length = 416 Score = 635 bits (1637), Expect = e-180, Method: Compositional matrix adjust. Identities = 302/416 (72%), Positives = 339/416 (81%) Query: 1 MTISDVLMVIAVICIWSLLLVNVALIIAGYLYYIKTENEDVPEIKGEYPFVTIMVPAHNE 60 M I+D L + AV+CIW LLL+N+ LI+AGY+YY+K E VPEI E PFV++MVPAHNE Sbjct: 1 MVIADYLALFAVVCIWGLLLINIVLIVAGYVYYLKNEARKVPEIPAEVPFVSVMVPAHNE 60 Query: 61 GVVISKTVESLLALDYPHDRYEIIVINDNSSDNSAELLGRIQSRQPERNLIIINTDAVTG 120 G VI KTVESLLA DYP DRYEIIVINDNSSDNSAELL IQ++ P R L IINTD +TG Sbjct: 61 GKVIVKTVESLLAFDYPVDRYEIIVINDNSSDNSAELLAAIQAKNPTRFLKIINTDNITG 120 Query: 121 GKGKSNALNIGFTRSRGELIAIYDADNTPERTALRYLVAEIMNDATLGAVIGKFRTRNRD 180 GKGKSNALNIGF SRGEL+AIYDADNTPER ALR LV EI NDA LGAVIGKFRTRNR+ Sbjct: 121 GKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGEITNDAKLGAVIGKFRTRNRN 180 Query: 181 ASLLTRFINIETLSFQWMAQAGRWKLFKLCTIPGTNFIMRRSIVESIGGWDVKAIAEDTE 240 AS LTRFINIETLSFQWMAQAGRW LFKLCTIPGTNFI+RRS++E IGGWDVKA+AEDTE Sbjct: 181 ASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFIVRRSLLEEIGGWDVKAVAEDTE 240 Query: 241 ISFRIYMMGYRIKFQPKSVTWEQEPQTVKVWFKQRTRWAKGNIYVIVKNIPLLFDRSAAK 300 ISFRIYMMGYRIKFQ K+VTWEQEPQT+ VWFKQR+RWAKGNIYVI+KN+PLLF R + Sbjct: 241 ISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRSRWAKGNIYVILKNVPLLFKREGRR 300 Query: 301 IRFDXXXXXXXXXXXXXXXXXXXXXXXXHAMGYVHTTIAGLSSFLWLLAIILFVVGIFVT 360 +RFD +A+G VHTT+AGLS LWLLAI+LFV G F+T Sbjct: 301 VRFDILYFLSIYFLLLTSLIVSDVLLVLYALGLVHTTLAGLSGALWLLAILLFVAGTFIT 360 Query: 361 LTTEKGEMSLSNLWIILLMYVSYCQLWMVVAAYGLYNYLKDVIFKREAKWYKTERY 416 LTTEKGE+S SNL I+LMYV+YCQLWMVVAAYG + +LKD I KRE KWYKTER+ Sbjct: 361 LTTEKGEISFSNLLFIMLMYVTYCQLWMVVAAYGFFIFLKDTILKRETKWYKTERF 416 >A0AFX5.1 A0AFX5_LISW6 Complete genome Length = 416 Score = 634 bits (1635), Expect = e-180, Method: Compositional matrix adjust. Identities = 303/416 (72%), Positives = 338/416 (81%) Query: 1 MTISDVLMVIAVICIWSLLLVNVALIIAGYLYYIKTENEDVPEIKGEYPFVTIMVPAHNE 60 M ++D L + AVICIW LLL+N+ LI+AGY+YY+K E VPEI E PFV+IMVPAHNE Sbjct: 1 MVVADYLALFAVICIWGLLLINIVLIVAGYVYYLKNEARKVPEIPAEVPFVSIMVPAHNE 60 Query: 61 GVVISKTVESLLALDYPHDRYEIIVINDNSSDNSAELLGRIQSRQPERNLIIINTDAVTG 120 G VI KTVESLLA DYP D YEIIVINDNSSDNSAELL IQ++ P R L IINTD +TG Sbjct: 61 GKVIVKTVESLLAFDYPKDCYEIIVINDNSSDNSAELLAAIQAKNPTRLLKIINTDNITG 120 Query: 121 GKGKSNALNIGFTRSRGELIAIYDADNTPERTALRYLVAEIMNDATLGAVIGKFRTRNRD 180 GKGKSNALNIGF SRGEL+AIYDADNTPER ALR LV EI NDA LGAVIGKFRTRNRD Sbjct: 121 GKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGEITNDAKLGAVIGKFRTRNRD 180 Query: 181 ASLLTRFINIETLSFQWMAQAGRWKLFKLCTIPGTNFIMRRSIVESIGGWDVKAIAEDTE 240 AS LTRFINIETLSFQWMAQAGRW LFKLCTIPGTNFI+RRS++E IGGWDVKA+AEDTE Sbjct: 181 ASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFIVRRSLLEEIGGWDVKAVAEDTE 240 Query: 241 ISFRIYMMGYRIKFQPKSVTWEQEPQTVKVWFKQRTRWAKGNIYVIVKNIPLLFDRSAAK 300 ISFRIYMMGYRIKFQ K+VTWEQEPQT+ VWFKQR+RWAKGNIYVI+KN+PLLF R + Sbjct: 241 ISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRSRWAKGNIYVILKNVPLLFKREGRR 300 Query: 301 IRFDXXXXXXXXXXXXXXXXXXXXXXXXHAMGYVHTTIAGLSSFLWLLAIILFVVGIFVT 360 +RFD +A+G VHTT+AGLS LWLLAI+LFV G F+T Sbjct: 301 VRFDILYFLSIYFLLLTSLIVSDILLVLYALGLVHTTLAGLSGALWLLAILLFVAGTFIT 360 Query: 361 LTTEKGEMSLSNLWIILLMYVSYCQLWMVVAAYGLYNYLKDVIFKREAKWYKTERY 416 LTTEKGE+S SNL ILLMYV+YCQLWMVVAAYG + +LKD + KRE KWYKTER+ Sbjct: 361 LTTEKGEISFSNLLFILLMYVTYCQLWMVVAAYGFFIFLKDTVLKRETKWYKTERF 416 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.324 0.138 0.419 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,257,442,379 Number of extensions: 85067633 Number of successful extensions: 334857 Number of sequences better than 1.0e-05: 2465 Number of HSP's gapped: 334120 Number of HSP's successfully gapped: 2493 Length of query: 416 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 278 Effective length of database: 1,760,596,133 Effective search space: 489445724974 Effective search space used: 489445724974 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 132 (55.5 bits)