BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0086.p (658 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0Z8X2.1 C0Z8X2_BREBN Putative uncharacterized protein 546 e-153 B3K5K0.1 B3K5K0_9BACI Beta-lactamase 493 e-137 C3AVA8.1 C3AVA8_BACMY Putative uncharacterized protein 458 e-127 C3BU93.1 C3BU93_9BACI Putative uncharacterized protein 458 e-127 C2NK10.1 C2NK10_BACCE Putative uncharacterized protein 457 e-126 >C0Z8X2.1 C0Z8X2_BREBN Putative uncharacterized protein Length = 667 Score = 546 bits (1407), Expect = e-153, Method: Compositional matrix adjust. Identities = 280/621 (45%), Positives = 387/621 (62%), Gaps = 12/621 (1%) Query: 37 EIEAFANTFFQQKEVKDQLAGAVLVVVKNGQVLLNKGYGYADVGSKKPFDSDHTVFRVAS 96 E+E FA+ FF Q E+K+ +AGA VVVK +VL KGYGYADV K P D D TVFRVAS Sbjct: 46 EVEQFADEFFNQSEIKNNMAGASFVVVKGDKVLFKKGYGYADVEKKIPVDPDRTVFRVAS 105 Query: 97 VSKLFTAVGVMQLAEKGKLDLDKDVQAYLPDVQIPNKTGGPLTLKHLMTHTGGFD----- 151 VSK+ TA VMQLAE+GK+DL+KDV AY+ +IPNKTG PLT+KHL+T++ GFD Sbjct: 106 VSKVITATAVMQLAEQGKIDLNKDVSAYMGGARIPNKTGTPLTMKHLLTNSTGFDFGDTS 165 Query: 152 AGTAEDPQKTYSLRDFIKETVPTVITKPGEAFNYNNYGYDLQGYIIEKVSGLPFEEYMMK 211 G+ D ++ L+ F+ + +P VI KPGE + Y+N G+D+QGY++E+V+G PF EY+ + Sbjct: 166 DGSTTDLKREVPLKKFVMDNLPNVIRKPGEFYRYDNLGFDIQGYVVEQVAGKPFGEYVQE 225 Query: 212 NLFAPLGMNNSDFIFTDKVKKAIATPYDSSLKQAPQPVNVPVNRPAGGMFSTGADMAKFL 271 +F PLGM NSDF T VK+ +A PY+ + P VP P GGM STG+DMAKF+ Sbjct: 226 RIFKPLGMENSDFRLTSIVKE-LAVPYNIIGQPIPTYAMVPTELPDGGMLSTGSDMAKFM 284 Query: 272 MAMLNDDPASKPRILTEASIRAMEHNSVTIHPKIPGAGYGLESNYTKYYNGYNVVEKGGD 331 +A LN I+ E + M +++HPK+ G E + YNG V+EK GD Sbjct: 285 IAHLNKGKLGNETIMEEETAAEMHRPHLSVHPKLNNMALGFEYANQQNYNGQYVIEKAGD 344 Query: 332 LPGFHSNIWLLPDEKTGVFLAFNSDKGNLRLPFFEQFMNRYFPKKGTGPAFVQPEPTKQQ 391 L G+H+ +WL+P+EK GVF+ N D +R+P + FM+ Y+PK E KQ+ Sbjct: 345 LQGYHTGMWLIPEEKVGVFVTVNKDY-EIRIPLIKAFMDHYYPKNEQKKGVF--ELAKQE 401 Query: 392 LLRFEGTYRDLRSPGWSYDISAVDGALIVKAPSGNHTLRQAEDLLFYDEEGVAAGFKPGA 451 L +FEGTY DLR+ W+ I A G LIVK G H L + E LLF DE+G A FK Sbjct: 402 LTKFEGTYSDLRNRMWTTRIRAEGGKLIVKDSLGEHVLYEVEPLLFQDEQGSKAAFKLND 461 Query: 452 DGNILYFAYN-KPGSWSMKAPEMPKFQDVPDDHPYAEYIYELXXXXXXXXXX--XXFEPD 508 G++ F Y K SW+ K PE ++QDV +DHPYA YIY L F P+ Sbjct: 462 HGDVRAFYYELKSDSWAEKMPEPQRYQDVENDHPYASYIYHLRQIGVFADMEGDNRFSPE 521 Query: 509 KPITRGQFIAMLVRLSTYPLSQKPSSFADTKGNEYEAYIQTAYEIGIANGLTNGMFNPDQ 568 + IT+G+F+ ++ S S+ + D GN+Y IQ+AYE+G+ +G F P++ Sbjct: 522 QQITKGEFVGWFIKWSGIAPSKHKPIYTDLSGNKYAREIQSAYELGLLKASADGKFYPNE 581 Query: 569 PVTREEAATLVWRLVKIVLSAAPVQSDLKGPYSSWAAEGLQFVVGKRLFGPDVQTSSTGS 628 P+TR+EAA++VWR+ L A P ++ L G +WA EG+ FVV K L+GP+V GS Sbjct: 582 PLTRQEAASIVWRMAFGYLHAEPKKAKLSGRTDAWALEGVHFVVAKGLYGPEVVKGRDGS 641 Query: 629 VDYRPKDIMLKQEAAALLSQL 649 +DY+ + +M+++EAAALLS+ Sbjct: 642 LDYKSEQLMVRKEAAALLSRF 662 >B3K5K0.1 B3K5K0_9BACI Beta-lactamase Length = 681 Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust. Identities = 266/633 (42%), Positives = 377/633 (59%), Gaps = 16/633 (2%) Query: 29 SPVNLGKAEIEAFANTFFQQKEVKDQLAGAVLVVVKNGQVLLNKGYGYADVGSKKPFDSD 88 +PV L E++AFA+ +F +V D LAGA++VVV++ +VLLN GYGYAD+ SKK D D Sbjct: 50 APV-LSSNEVKAFADAYFADPQVSDMLAGALVVVVQDDKVLLNTGYGYADLESKKKIDPD 108 Query: 89 HTVFRVASVSKLFTAVGVMQLAEKGKLDLDKDVQAYLPDVQIPNKTGGPLTLKHLMTHTG 148 T+FR+AS+SK TA VMQL E GK+DL +++ Y+PDV+IPN TG P+T++HL+THT Sbjct: 109 RTLFRMASISKSVTATAVMQLIENGKIDLKQNITEYMPDVKIPNHTGAPVTVEHLLTHTT 168 Query: 149 GFDAGTAED------PQKTYSLRDFIKETVPTVITKPGEAFNYNNYGYDLQGYIIEKVSG 202 GFD + + L DFI+ P V+ PGE + Y+N +QGYI++ VSG Sbjct: 169 GFDFTDSYSVPPHIIQKGEIPLADFIRVNAPAVVRTPGEVYRYDNLASSMQGYIVQSVSG 228 Query: 203 LPFEEYMMKNLFAPLGMNNSDFIFTDKVKKAIATPYDSSLKQAPQPVNVPVNRPAGGMFS 262 PFE+Y+ K +F PL M ++ F D + +AT Y+ + NVP P GGMF+ Sbjct: 229 EPFEKYIKKQIFDPLNMKHAAFRMNDDIIANLATGYNVDQQPIKPYENVPTIAPEGGMFA 288 Query: 263 TGADMAKFLMAMLNDDPASKPRILTEASIRAMEHNSVTIHPKIPGAGYGLESNYTKYYNG 322 +G DMA F+ A LN+ RIL E + R M H + IP YG ES +NG Sbjct: 289 SGTDMANFITAHLNEGRFGSARILKEETTRLM-HKTHYDAAGIPLTSYGFESFMHNSHNG 347 Query: 323 YNVVEKGGDLPGFHSNIWLLPDEKTGVFLAFNSDK-GNLRLPFFEQFMNRYFPKK-GTGP 380 V+ KGGDL G+HS +WLLPD+ G + NSDK ++R FF FM+ ++PKK G+ Sbjct: 348 QTVIGKGGDLEGYHSWLWLLPDQNVGGLIVVNSDKSASIRSEFFVAFMDHFYPKKQGSEN 407 Query: 381 AFVQPEPTKQ-QLLRFEGTYRDLRSPGWSYDISAVDGALIVKAPSGNHTLRQAEDLLFYD 439 +F P Q QL +FEG YR LR+P + ++A G L+VK G H L+ L F D Sbjct: 408 SF----PLHQEQLQKFEGLYRSLRTPIIATQVTAGQGELLVKDAMGEHKLKPVGPLRFVD 463 Query: 440 EEGVAAGFKPGADGNILYFAYNKPGSWSMKAPEMPKFQDVPDDHPYAEYIY-ELXXXXXX 498 E GV A FK +G++ Y Y S S K P + DVP+++PYA+ IY Sbjct: 464 ENGVPAAFKEDDNGDVAYMYYTAIDSMSEKLPNPAPYNDVPEENPYAKDIYFAQSLQAFG 523 Query: 499 XXXXXXFEPDKPITRGQFIAMLVRLSTYPLSQKPSSFADTKGNEYEAYIQTAYEIGIANG 558 F PD+PITR +F++++ RL+ S+ S F D +G+ Y+Q A +G NG Sbjct: 524 DKGQSSFRPDEPITRAEFVSVISRLAGMKPSESVSIFKDMQGHPLAGYVQNAANMGAVNG 583 Query: 559 LTNGMFNPDQPVTREEAATLVWRLVKIVLSAAPVQSDLKGPYSSWAAEGLQFVVGKRLFG 618 TN F PDQP+TR+EAA ++WR L A V + L+ ++WA E +QF+VG + G Sbjct: 584 KTNQNFEPDQPITRQEAAAIIWRTAHHALGAKAVPAKLRTKPAAWADEAVQFMVGTGMHG 643 Query: 619 PDVQTSSTGSVDYRPKDIMLKQEAAALLSQLLK 651 P+V + G+ DYRP D +L++EAAA+ ++L++ Sbjct: 644 PEVTKDANGAADYRPTDNLLRKEAAAIYAKLIQ 676 >C3AVA8.1 C3AVA8_BACMY Putative uncharacterized protein Length = 641 Score = 458 bits (1179), Expect = e-127, Method: Compositional matrix adjust. Identities = 250/630 (39%), Positives = 366/630 (58%), Gaps = 13/630 (2%) Query: 26 KNASPVNLGKAEIEAFANTFFQQKEVKDQLAGAVLVVVKNGQVLLNKGYGYADVGSKKPF 85 + S + L ++EAF N +K + G +VVVK+ Q+L KGYG+++ P Sbjct: 9 ETVSSIALNAKDVEAFTNKVIPEKMKAENAPGVAIVVVKDDQILFQKGYGFSNKEQNIPI 68 Query: 86 DSDHTVFRVASVSKLFTAVGVMQLAEKGKLDLDKDVQAYLPDVQIPNKTGGPLTLKHLMT 145 D TVFR+ASVSK+FTA VMQL E+GK+DL+KD+ Y+ ++ N G P+T+KHL+T Sbjct: 69 DPKKTVFRLASVSKVFTASAVMQLVEQGKIDLNKDIVNYMGGLKYQNNVGEPVTMKHLLT 128 Query: 146 HTGGFD-----AGTAEDPQKTYS-LRDFIKETVPTVITKPGEAFNYNNYGYDLQGYIIEK 199 HT GFD G D Y+ L+D+++E +PTV+ KPG+ + Y+N+ LQGYI++ Sbjct: 129 HTTGFDDVDPRLGDIHDQINDYTKLKDYVEENMPTVVRKPGDTYTYDNFASMLQGYIVQN 188 Query: 200 VSGLPFEEYMMKNLFAPLGMNNSDFIFTDKVKKAIATPYDSSLKQAPQPVNVPVNRPAGG 259 ++ PF +YM KN+F PL M NS F+ T+ +K +AT YD P P + P G Sbjct: 189 LTDTPFYKYMAKNIFYPLEMQNSSFVMTNFIKDKLATGYDKKGDVIPFYQTRPTDMPQGS 248 Query: 260 MFSTGADMAKFLMAMLNDDPASKPRILTEASIRAMEHNSVTIHPKIPGAGYGLESNYTKY 319 MFSTG+D+A F++A LN +IL +++ M+ +HPK P YG E + Sbjct: 249 MFSTGSDVANFMIAQLNGGKFKNKQILKTETVQDMQQTKFALHPKYPNMTYGFEFFSPQS 308 Query: 320 YNGYNVVEKGGDLPGFHSNIWLLPDEKTGVFLAFNSDKGNLRLPFFEQFMNRYFPKKGTG 379 +NG V KGG++PGF S +WL+P+ K GVF+ N D L F++FMN YFP K T Sbjct: 309 HNGQYVFGKGGNIPGFSSLMWLIPEHKLGVFVVTNKDSSLLPYKLFDEFMNHYFPDK-TK 367 Query: 380 PAFVQPEPTKQQLLRFEGTYRDLRSPGWSYDISAVDGALIVKAPS-GNHTLRQAEDLLFY 438 P +++ P++++L +FEG YRDLR + +G L V G L+Q + LLF Sbjct: 368 PEYLK--PSEEELKKFEGVYRDLRVKNLITHVKISEGKLFVADKRYGKQELKQIDPLLFE 425 Query: 439 DEEGVAAGFKPGADGNILYFAYNKPGSWSMKAPEMPKFQDVPDDHPYAEYIYELXXXXXX 498 DE+G FK DG + + GS ++K E +FQDV +HPYA++I L Sbjct: 426 DEKGNYMAFKLHKDGTVKEIIHWNSGSSAVKLSEPKRFQDVEVNHPYAKFIDPLHQYDIL 485 Query: 499 XXXXX-XFEPDKPITRGQFIAMLVRLSTY-PLSQKPSSFADTKGNEYEAYIQTAYEIGIA 556 F P+ P+TRG+F L +++ + P S+K F+D KG++Y ++IQ YE+GI Sbjct: 486 KANKEGNFVPEAPLTRGEFSYWLSQIAYFAPPSKKDPVFSDVKGHQYASHIQKLYELGIL 545 Query: 557 NGLTNGMFNPDQPVTREEAATLVWRLVKIVLSAAPVQSDLKGPYSSWAAEGLQFVVGKRL 616 F PD+ +TR+EAA + W +++ L A P ++ LKG WA E ++ +VG L Sbjct: 546 YEKEGEQFYPDRAITRQEAAWIAWHYLEM-LEAPPAEATLKGETDDWAIESVKNIVGHHL 604 Query: 617 FGPDVQTSSTGSVDYRPKDIMLKQEAAALL 646 GP+V + GS DY K IM +QEAAALL Sbjct: 605 VGPEVIYNEDGSADYLSKQIMKRQEAAALL 634 >C3BU93.1 C3BU93_9BACI Putative uncharacterized protein Length = 641 Score = 458 bits (1178), Expect = e-127, Method: Compositional matrix adjust. Identities = 250/630 (39%), Positives = 366/630 (58%), Gaps = 13/630 (2%) Query: 26 KNASPVNLGKAEIEAFANTFFQQKEVKDQLAGAVLVVVKNGQVLLNKGYGYADVGSKKPF 85 + S + L ++EAF N +K + G +VVVK+ Q+L KGYG+++ P Sbjct: 9 ETVSSIALNAIDVEAFTNKVIPEKMKAENAPGVAIVVVKDDQILFQKGYGFSNKEQNIPI 68 Query: 86 DSDHTVFRVASVSKLFTAVGVMQLAEKGKLDLDKDVQAYLPDVQIPNKTGGPLTLKHLMT 145 D TVFR+ASVSK+FTA VMQL E+GK+DL+KD+ Y+ ++ N G P+T+KHL+T Sbjct: 69 DPKKTVFRLASVSKVFTASAVMQLVEQGKIDLNKDIVNYMGGLKYQNNMGEPVTMKHLLT 128 Query: 146 HTGGFD-----AGTAEDPQKTYS-LRDFIKETVPTVITKPGEAFNYNNYGYDLQGYIIEK 199 HT GFD G D Y+ L+D+++E +PTV+ KPG+ + Y+N+ LQGYI++ Sbjct: 129 HTTGFDDVDPRLGDIHDQINDYTKLKDYVEENMPTVVRKPGDTYTYDNFASMLQGYIVQN 188 Query: 200 VSGLPFEEYMMKNLFAPLGMNNSDFIFTDKVKKAIATPYDSSLKQAPQPVNVPVNRPAGG 259 ++ PF +YM KN+F PL M NS F+ T+ +K +AT YD P P + P G Sbjct: 189 LTDTPFYKYMAKNIFYPLEMQNSSFVMTNFIKDKLATGYDKKGDVIPFYQTRPTDMPQGS 248 Query: 260 MFSTGADMAKFLMAMLNDDPASKPRILTEASIRAMEHNSVTIHPKIPGAGYGLESNYTKY 319 MFSTG+D+A F++A LN +IL +++ M+ +HPK P YG E + Sbjct: 249 MFSTGSDVANFMIAQLNGGKFKNKQILKTETVQDMQQTKFALHPKYPNMTYGFEFFSPQS 308 Query: 320 YNGYNVVEKGGDLPGFHSNIWLLPDEKTGVFLAFNSDKGNLRLPFFEQFMNRYFPKKGTG 379 +NG V KGG++PGF S +WL+P+ K GVF+ N D L F++FMN YFP K T Sbjct: 309 HNGQYVFGKGGNIPGFSSLMWLIPEHKLGVFVVTNKDSSLLPYKLFDEFMNHYFPDK-TK 367 Query: 380 PAFVQPEPTKQQLLRFEGTYRDLRSPGWSYDISAVDGALIVKAPS-GNHTLRQAEDLLFY 438 P +++ P++++L +FEG YRDLR + +G L V G L+Q + LLF Sbjct: 368 PEYLK--PSEEELKKFEGVYRDLRVKNLITHVKISEGKLFVADKRYGKQELKQIDPLLFE 425 Query: 439 DEEGVAAGFKPGADGNILYFAYNKPGSWSMKAPEMPKFQDVPDDHPYAEYIYELXXXXXX 498 DE+G FK DG + + GS ++K E +FQDV +HPYA++I L Sbjct: 426 DEKGNYMAFKLHKDGTVKEMIHWNSGSSAVKVSEPKRFQDVEVNHPYAKFIDPLHQYDIL 485 Query: 499 XXXXX-XFEPDKPITRGQFIAMLVRLSTY-PLSQKPSSFADTKGNEYEAYIQTAYEIGIA 556 F P+ P+TRG+F L +++ + P S+K F+D KG++Y ++IQ YE+GI Sbjct: 486 KANKEGNFVPEAPLTRGEFSYWLSQIAYFAPPSKKDPVFSDVKGHQYASHIQKLYELGIL 545 Query: 557 NGLTNGMFNPDQPVTREEAATLVWRLVKIVLSAAPVQSDLKGPYSSWAAEGLQFVVGKRL 616 F PD+ +TR+EAA + W +++ L A P ++ LKG WA E ++ +VG L Sbjct: 546 YEKEGEQFYPDRAITRQEAAWIAWHYLEM-LEAPPAEATLKGETDDWAIESVKNIVGHHL 604 Query: 617 FGPDVQTSSTGSVDYRPKDIMLKQEAAALL 646 GP+V + GS DY K IM +QEAAALL Sbjct: 605 VGPEVIYNEDGSADYLSKQIMKRQEAAALL 634 >C2NK10.1 C2NK10_BACCE Putative uncharacterized protein Length = 660 Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust. Identities = 248/636 (38%), Positives = 370/636 (58%), Gaps = 13/636 (2%) Query: 26 KNASPVNLGKAEIEAFANTFFQQKEVKDQLAGAVLVVVKNGQVLLNKGYGYADVGSKKPF 85 + +P+ L E+EAF N +K K+ AG L+VVK+ Q+L KG+G++D P Sbjct: 28 ETVAPITLNPKEVEAFTNKVIPEKMKKENAAGVALIVVKDNQILFQKGFGFSDKEKNTPI 87 Query: 86 DSDHTVFRVASVSKLFTAVGVMQLAEKGKLDLDKDVQAYLPDVQIPNKTGGPLTLKHLMT 145 D TVFR+AS+SK+FTA VMQL E+GK+DL+KD+ Y+ ++ N G P+T++HL+T Sbjct: 88 DPKKTVFRLASISKVFTASAVMQLVEQGKIDLNKDIVNYMGGLKYQNNMGEPVTMEHLLT 147 Query: 146 HTGGFDAGTAEDPQKTYS------LRDFIKETVPTVITKPGEAFNYNNYGYDLQGYIIEK 199 HT GFD Y L+D++++ +PTV+ KPG+ + Y+N+ LQGYI++ Sbjct: 148 HTTGFDYVDPRPEDIHYQDNDYTMLKDYVEDNMPTVVRKPGDTYTYDNFASMLQGYIVQN 207 Query: 200 VSGLPFEEYMMKNLFAPLGMNNSDFIFTDKVKKAIATPYDSSLKQAPQPVNVPVNRPAGG 259 ++ PF +YM KN+F PL M+NS F+ T+ +K+ +AT YD+ P P + P G Sbjct: 208 LTNTPFYKYMAKNVFYPLEMHNSSFVMTNFIKEKLATGYDAKGNVIPFYQTRPTDMPQGS 267 Query: 260 MFSTGADMAKFLMAMLNDDPASKPRILTEASIRAMEHNSVTIHPKIPGAGYGLESNYTKY 319 MFSTG+D+A F++A LND +IL + ++ M+ +HPK P YG E + Sbjct: 268 MFSTGSDVANFMIAQLNDGKFKNNQILQKETVEDMQKTKFALHPKYPNMTYGFEFFSPQS 327 Query: 320 YNGYNVVEKGGDLPGFHSNIWLLPDEKTGVFLAFNSDKGNLRLPFFEQFMNRYFPKKGTG 379 +NG V KGG++PGF S +WL+P+ K GVF+ N D L + F+ FMN YFP K T Sbjct: 328 HNGQYVFGKGGNIPGFSSLMWLIPEHKIGVFVVTNKDSSALPVEVFDDFMNEYFPDK-TK 386 Query: 380 PAFVQPEPTKQQLLRFEGTYRDLRSPGWSYDISAVDGALIVKAPS-GNHTLRQAEDLLFY 438 P +++ P +++L +FEG YRDLR ++ +G L V + G L+Q + LLF Sbjct: 387 PEYLK--PNEEELKKFEGVYRDLRLKNLMSHVNISEGKLYVSDKAYGKQELKQIDPLLFE 444 Query: 439 DEEGVAAGFKPGADGNILYFAYNKPGSWSMKAPEMPKFQDVPDDHPYAEYIYELXXXXXX 498 DE+G FK DG + + GS ++K E +F+DV ++HPYA++I L Sbjct: 445 DEKGNYMAFKLHKDGTVKEMIHWNSGSSAVKLSEPERFKDVDENHPYAKFINPLHQYEVL 504 Query: 499 XXXXX-XFEPDKPITRGQFIAMLVRLSTY-PLSQKPSSFADTKGNEYEAYIQTAYEIGIA 556 F P+ +TR +F L +++ + P S+K F+D K + Y +IQ YEIGI Sbjct: 505 QANKEGNFTPESSLTRAEFAYWLSQIAYFTPPSKKEPVFSDVKNHPYAPHIQKLYEIGIL 564 Query: 557 NGLTNGMFNPDQPVTREEAATLVWRLVKIVLSAAPVQSDLKGPYSSWAAEGLQFVVGKRL 616 F+PD+ +TR+EAA + W+ +K+ L A + LKG WA E ++ +VG RL Sbjct: 565 YEKEGEQFHPDRAITRQEAAWITWQYLKM-LGAPSADATLKGETDDWAIESVKNIVGHRL 623 Query: 617 FGPDVQTSSTGSVDYRPKDIMLKQEAAALLSQLLKS 652 GP+V + GS DY K M +QEAAALL +L S Sbjct: 624 VGPEVIYNEDGSADYLSKQSMKRQEAAALLFYVLLS 659 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.136 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,143,564,504 Number of extensions: 188258336 Number of successful extensions: 396826 Number of sequences better than 1.0e-05: 3967 Number of HSP's gapped: 391323 Number of HSP's successfully gapped: 3994 Length of query: 658 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 515 Effective length of database: 1,713,491,058 Effective search space: 882447894870 Effective search space used: 882447894870 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 135 (56.6 bits)