BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0082.p (670 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C5DAJ8.1 C5DAJ8_9BACI Ferrous iron transport protein B 733 0.0 A0AKL2.1 A0AKL2_LISW6 FeoB protein 701 0.0 A4IP49.1 A4IP49_GEOTN Ferrous iron transport protein B 700 0.0 Q5KYV3.1 Q5KYV3_GEOKA Ferrous iron uptake system protein B 700 0.0 C3J5T9.1 C3J5T9_9BACI Ferrous iron transport protein B 698 0.0 >C5DAJ8.1 C5DAJ8_9BACI Ferrous iron transport protein B Length = 665 Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust. Identities = 374/670 (55%), Positives = 462/670 (68%), Gaps = 8/670 (1%) Query: 2 SSIALLGNPNTGKTSLFNTLTSSYEYVGNWAGVTVEKKIGSLKNGAGKLIDLPGIYSLHP 61 SSIAL GNPNTGKTSLFN LT SYEYVGNW+GVTVEKK+G L+ ++DLPGIYSL P Sbjct: 3 SSIALFGNPNTGKTSLFNNLTGSYEYVGNWSGVTVEKKVGMLRQHGVPVVDLPGIYSLRP 62 Query: 62 LSRDEGVATQYLIEESPEALINIVDASQXXXXXXXXXXXXEYGKPTVLGLNMIDVAKARG 121 LSRDEGVAT++L+ ES A++NIVDASQ E+GKP ++ LNMIDVA+ RG Sbjct: 63 LSRDEGVATEFLLTESFSAIVNIVDASQLKRNLHLTVQLLEFGKPLIMALNMIDVAEKRG 122 Query: 122 IAVNHEVLQSRLGITVLPLIARTGKGSGQVLSILEKASTIPQVTFRLDYGELTEEAIASI 181 I V+ + L + V+P+IARTGKG+ +++ + AS + F +DYG E A+ I Sbjct: 123 IKVDAKKLSQCINAPVIPVIARTGKGTKELVRAILSASEQNEHQFSIDYGADVEVAVQKI 182 Query: 182 VTELKSIPGLP-NLRWVALQLMEQNPVVLELLKKRMDISRLLVICDGCQNALQSSKQALT 240 +L LP + RW+ALQ +E N V L+ +DI+ L++I D Q L T Sbjct: 183 GEQLPD--NLPVSKRWLALQFLEGNKRVHAYLQTYVDIAPLILIRDNVQQTL-----GCT 235 Query: 241 LPQWIRSVRMDYIRSLCAAVMDTTLLKPHNLTERLDSILTHRFLGLPLFIFFMYAMFKTT 300 L + I VR +I ++ P LTE++D+I+T+++LGLP+F+ FMY MF T Sbjct: 236 LAEHIYKVRDKWITNVIKKSTVAIKQNPLTLTEKIDAIVTNKYLGLPIFLLFMYIMFMLT 295 Query: 301 FDWVGGPLSDLVDGLISGPISTGASSLLQTVGASDFTHALXXXXXXXXXXXXXXXXXXXF 360 FDW+G PL+DL+D SGP++ S LL +GAS F L F Sbjct: 296 FDWLGTPLADLLDQFFSGPLTDWLSKLLSLIGASPFIKELVLSGIVSGVGGVLVFVPQIF 355 Query: 361 ILFLMISFLEDSGYMARVCLLMDSTMERMGLNGKAFIPFIIGFGCNVPAIMAARSIEQPK 420 ILF IS LEDSGYMARV ++MD ME +GLNGKAFIP IIGFGCNVP +MAAR+IEQPK Sbjct: 356 ILFFFISLLEDSGYMARVAMVMDRFMEAIGLNGKAFIPMIIGFGCNVPGVMAARTIEQPK 415 Query: 421 DRMLTTLLMPLMSCSARLPVYLLFAAVFFPAQQATAVLAMYVLGVAFALILCKLFSKHLF 480 +R+LT LL+P MSCSARLPVY LFA FF QA V ++YVLG+ AL L K+FS LF Sbjct: 416 ERLLTILLLPFMSCSARLPVYALFAGTFFAKNQAIVVFSLYVLGIVVALGLAKIFSSTLF 475 Query: 481 KNESSIFIIELPPYRMPQLKTLGRSTWEKGKGFLRKAGTIILAGSVIIWLMSYAGPSGLN 540 KNESSIF+IELPPYRMPQ TL RSTW+KGKGF+RKAGT I GSV IWL++Y GP G+ Sbjct: 476 KNESSIFVIELPPYRMPQALTLWRSTWDKGKGFIRKAGTFIFGGSVAIWLLTYVGPKGIG 535 Query: 541 VEMDNSFLAKFGGLIAPLLHPLGFGTWQAGSTLVPGFLAKEVVVSTMNIIYHAPDAAGLE 600 V MD+SFLA GG+IAP+L PLGFGTWQAGS+L+ GFLAKEVVVSTMNIIYHA D L+ Sbjct: 536 VSMDDSFLAVIGGVIAPILAPLGFGTWQAGSSLITGFLAKEVVVSTMNIIYHAKDMDLLQ 595 Query: 601 GQISQVFTPLSSVSFMAFILLYIPCLATVGVIRKETASWKWTFFSMGXXXXXXXXXXXXI 660 G ++Q FTPLS++SFM F+LLY+PCLATV IRKET S KWTF S+G I Sbjct: 596 GVMAQHFTPLSALSFMTFVLLYVPCLATVATIRKETGSRKWTFISIGCALSIAYVISFVI 655 Query: 661 FQGGSLLGLS 670 +QGG+LLG S Sbjct: 656 YQGGTLLGFS 665 >A0AKL2.1 A0AKL2_LISW6 FeoB protein Length = 664 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/666 (52%), Positives = 450/666 (67%), Gaps = 6/666 (0%) Query: 2 SSIALLGNPNTGKTSLFNTLTSSYEYVGNWAGVTVEKKIGSLKNGAGKLIDLPGIYSLHP 61 ++ LLGNPNTGKTSLFN LT SYEYVGNW+GVTVEKK+G+L++ GKLIDLPGIY L+P Sbjct: 4 NTYCLLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGTLRSKTGKLIDLPGIYDLNP 63 Query: 62 LSRDEGVATQYLIEESPEALINIVDASQXXXXXXXXXXXXEYGKPTVLGLNMIDVAKARG 121 +SRDE V T++L+EE + ++NIVD+SQ E+G P V+GLNM+DVA RG Sbjct: 64 ISRDETVVTRFLLEEKFDCMLNIVDSSQIERNLNLTIQLLEFGAPVVMGLNMVDVAAGRG 123 Query: 122 IAVNHEVLQSRLGITVLPLIARTGKGSGQVLSILEKASTIPQVTFRLDYGELTEEAIASI 181 I +N + L +L I +LP++AR+GKG+ ++LS L + P + L YGEL E AIA I Sbjct: 124 IHLNIQNLAKKLRIPILPVVARSGKGTDEILSTLSEKHVAPAIPLVLPYGELAETAIAEI 183 Query: 182 VTELKSIPGLPNLRWVALQLMEQNPVVLELLKKRMDISRLLVICDGCQNALQSSKQALTL 241 + K I RW+A+Q + +N V E L +L I + AL+ L Sbjct: 184 QSLTKDIIPTKQSRWLAVQFLSKNEVTEEFLASNSAFEQLKKIRTELETALEGK-----L 238 Query: 242 PQWIRSVRMDYIRSLCAAVMDTTLLKPHNLTERLDSILTHRFLGLPLFIFFMYAMFKTTF 301 +R++YI +C ++ T L+++LD I TH+F G+P+F+ M+ +F+ TF Sbjct: 239 ENHFHQIRVNYIHDICLTSVEYTRNSDIPLSDKLDKIFTHKFFGIPIFLGIMWLIFQITF 298 Query: 302 DWVGGPLSDLVDGLISGPISTGASSLLQTVGASDFTHALXXXXXXXXXXXXXXXXXXXFI 361 WVG PLSDL+DG ISG ++ +S L T+GAS F L + Sbjct: 299 TWVGAPLSDLLDGFISGSLTDWVTSFLTTIGASGFIIDLVAEGIIAGVGGVLVFVPQILV 358 Query: 362 LFLMISFLEDSGYMARVCLLMDSTMERMGLNGKAFIPFIIGFGCNVPAIMAARSIEQPKD 421 +F IS LEDSGYMAR+ ++MD ME GLNGKAFIP IIGFGCNVP IMAARSIE+ K+ Sbjct: 359 IFFFISVLEDSGYMARIAVVMDRVMEIFGLNGKAFIPMIIGFGCNVPGIMAARSIEESKE 418 Query: 422 RMLTTLLMPLMSCSARLPVYLLFAAVFFPAQQATAVLAMYVLGVAFALILCKLFSKHLFK 481 R LT L+ P MSCSARLPVY LF VFF QA VL++YV+G+ ALI+ K+ SK L K Sbjct: 419 RTLTILVSPFMSCSARLPVYALFVGVFFEKYQALVVLSLYVIGILMALIVTKILSKTLLK 478 Query: 482 NESSIFIIELPPYRMPQLKTLGRSTWEKGKGFLRKAGTIILAGSVIIWLMSYAGPSGLNV 541 ++S+F++ELPPYR+P LKTL RSTWEKGKGFLRKAGT I AGSVIIWL++YAGPSGL+V Sbjct: 479 KDNSVFVVELPPYRLPSLKTLWRSTWEKGKGFLRKAGTFIFAGSVIIWLLNYAGPSGLDV 538 Query: 542 EMDNSFLAKFGGLIAPLLHPLGFGTWQAGSTLVPGFLAKEVVVSTMNIIYHAPDAAGLEG 601 M SFLA GG++APLL PLGFGTWQAG+TL+PGFLAKEVVVSTM IIY +++ + Sbjct: 539 PMGESFLAIIGGMLAPLLVPLGFGTWQAGATLIPGFLAKEVVVSTMAIIYAVGESS-MGS 597 Query: 602 QISQVFTPLSSVSFMAFILLYIPCLATVGVIRKETASWKWTFFSMGXXXXXXXXXXXXIF 661 +S +TPLS+ FM FILLYIPCLATV IRKET+SWKWT FS+ ++ Sbjct: 598 VVSTFYTPLSAYCFMLFILLYIPCLATVAAIRKETSSWKWTAFSVAYPLVTAYVLVFLVY 657 Query: 662 QGGSLL 667 Q GSL Sbjct: 658 QIGSLF 663 >A4IP49.1 A4IP49_GEOTN Ferrous iron transport protein B Length = 664 Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/670 (53%), Positives = 446/670 (66%), Gaps = 12/670 (1%) Query: 1 MSSIALLGNPNTGKTSLFNTLTSSYEYVGNWAGVTVEKKIGSLKNGAGKLIDLPGIYSLH 60 MS +AL GNPNTGKTSLFN LT SYEYVGNW+GVTVEKK+G L+ ++DLPGIYSL Sbjct: 1 MSYVALFGNPNTGKTSLFNCLTGSYEYVGNWSGVTVEKKVGVLRQHGVPVVDLPGIYSLQ 60 Query: 61 PLSRDEGVATQYLIEESPEALINIVDASQXXXXXXXXXXXXEYGKPTVLGLNMIDVAKAR 120 PLSRDEGVAT +L+ E A++NIVDASQ E+G+P ++ LNM+DVA+ R Sbjct: 61 PLSRDEGVATDFLLTEPCSAIVNIVDASQLQRNLHLTVQLLEFGRPLIIALNMVDVAEKR 120 Query: 121 GIAVNHEVLQSRLGITVLPLIARTGKGSGQVLSILEKASTIPQVTFRLDYGELTEEAIAS 180 GI ++ L LG+ V+P+IARTGKG+ ++ + A +DYG E AI Sbjct: 121 GIKIDAVKLSRHLGVPVVPVIARTGKGAKELERAILSAKDGHHSRMFIDYGVEVERAIRR 180 Query: 181 IVTEL-KSIPGLPNLRWVALQLMEQNPVVLELLKKRMDISRLLVICDGCQNAL--QSSKQ 237 I +L +PG + RW+ALQ +E N + L+ D+S LL I + AL Q++K Sbjct: 181 IAEQLPDDVPG--DKRWMALQFLEGNERLAAYLRDHFDLSPLLAIRKETEQALGCQAAKH 238 Query: 238 ALTLPQWIRSVRMDYIRSLCAAVMDTTLLKPHNLTERLDSILTHRFLGLPLFIFFMYAMF 297 I R +I AA KP LTE++D+++T+R++GLP+F+ MY +F Sbjct: 239 -------IYETRDRWISETIAAAAIEFKPKPLTLTEKVDAVVTNRYVGLPIFLALMYIVF 291 Query: 298 KTTFDWVGGPLSDLVDGLISGPISTGASSLLQTVGASDFTHALXXXXXXXXXXXXXXXXX 357 TF+W+G PL+D +D SGP++ S LL GAS F AL Sbjct: 292 MLTFNWLGTPLADQLDTFFSGPLTDWLSRLLDWAGASPFIEALVLDGIVAGVGGVLVFVP 351 Query: 358 XXFILFLMISFLEDSGYMARVCLLMDSTMERMGLNGKAFIPFIIGFGCNVPAIMAARSIE 417 FILF IS LEDSGYMARV ++MD ME +GLNGKAFIP IIGFGCNVP +MAAR+IE Sbjct: 352 QIFILFFFISLLEDSGYMARVAMVMDRLMEAIGLNGKAFIPMIIGFGCNVPGVMAARTIE 411 Query: 418 QPKDRMLTTLLMPLMSCSARLPVYLLFAAVFFPAQQATAVLAMYVLGVAFALILCKLFSK 477 QPK+R+LT LL+P MSCSARLPVY LFA FF +QA V ++YVLG+ AL L KLFS Sbjct: 412 QPKERLLTMLLLPFMSCSARLPVYALFAGTFFIHEQALVVFSLYVLGIVVALGLAKLFSS 471 Query: 478 HLFKNESSIFIIELPPYRMPQLKTLGRSTWEKGKGFLRKAGTIILAGSVIIWLMSYAGPS 537 +FKNESS+F+IELPPYR+PQ TL RSTWEKGKGF+RKAGT I GSV IWL++Y GP Sbjct: 472 TVFKNESSLFVIELPPYRVPQALTLWRSTWEKGKGFVRKAGTFIFGGSVAIWLLTYVGPH 531 Query: 538 GLNVEMDNSFLAKFGGLIAPLLHPLGFGTWQAGSTLVPGFLAKEVVVSTMNIIYHAPDAA 597 G+ V MD+S LA GGLIAPLL PLGFG WQAG+ L+ GFLAKEVVVSTMNIIYH +A Sbjct: 532 GVGVPMDDSLLAAIGGLIAPLLAPLGFGAWQAGAALITGFLAKEVVVSTMNIIYHVREAN 591 Query: 598 GLEGQISQVFTPLSSVSFMAFILLYIPCLATVGVIRKETASWKWTFFSMGXXXXXXXXXX 657 GLE I+ FTPLS++SFM F+LLY PCLATV IRKET SWKWT S+G Sbjct: 592 GLEQMIAAHFTPLSALSFMVFVLLYTPCLATVATIRKETGSWKWTLLSIGIALTVAYMIS 651 Query: 658 XXIFQGGSLL 667 ++Q G + Sbjct: 652 FLVYQVGMMF 661 >Q5KYV3.1 Q5KYV3_GEOKA Ferrous iron uptake system protein B Length = 664 Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust. Identities = 359/671 (53%), Positives = 446/671 (66%), Gaps = 8/671 (1%) Query: 1 MSSIALLGNPNTGKTSLFNTLTSSYEYVGNWAGVTVEKKIGSLKNGAGKLIDLPGIYSLH 60 MS +AL GNPNTGKTSLFN LT SYEYVGNW+GVTVEKK+G L+ ++DLPG+YSL Sbjct: 1 MSYVALFGNPNTGKTSLFNCLTGSYEYVGNWSGVTVEKKVGVLRQHGVPVVDLPGVYSLQ 60 Query: 61 PLSRDEGVATQYLIEESPEALINIVDASQXXXXXXXXXXXXEYGKPTVLGLNMIDVAKAR 120 PLSRDEGVAT +L+ E A++NIVDASQ E+G+P V+ LNM+DVA+ R Sbjct: 61 PLSRDEGVATDFLLTEPCSAIVNIVDASQLRRNLHLTVQLLEFGRPLVIALNMVDVAEKR 120 Query: 121 GIAVNHEVLQSRLGITVLPLIARTGKGSGQVLSILEKASTIPQVTFRLDYGELTEEAIAS 180 G+ V+ L LG+ V+P+IARTGKG+ +++ + A P + +DYG E AI Sbjct: 121 GVKVDAAKLSKYLGVPVIPVIARTGKGTNELVHAVLAAKDKPHSSIAIDYGVEVENAIRC 180 Query: 181 IVTEL-KSIPGLPNLRWVALQLMEQNPVVLELLKKRMDISRLLVICDGCQNALQSSKQAL 239 I L +PG + RWVALQ +E N + L+ R+D+S LL + L SS Sbjct: 181 ITERLPDDVPG--DKRWVALQFLEGNERMAAYLRGRLDLSPLLEARAEAEQKLGSS---- 234 Query: 240 TLPQWIRSVRMDYIRSLCAAVMDTTLLKPHNLTERLDSILTHRFLGLPLFIFFMYAMFKT 299 + + I R +I A KP TE++D ++T+R++GLP+F+ MY +F Sbjct: 235 -VAEQIYETRDRWIGEAIAVAAMALENKPLTWTEKIDVVVTNRYVGLPIFLALMYLVFML 293 Query: 300 TFDWVGGPLSDLVDGLISGPISTGASSLLQTVGASDFTHALXXXXXXXXXXXXXXXXXXX 359 TF+W+G PL+D +D SGP++ S LL GAS F AL Sbjct: 294 TFNWLGTPLADQLDAFFSGPLTDWLSRLLDWAGASPFIKALILDGIVAGVGGVLVFVPQI 353 Query: 360 FILFLMISFLEDSGYMARVCLLMDSTMERMGLNGKAFIPFIIGFGCNVPAIMAARSIEQP 419 FILF IS LEDSGYMARV ++MD ME +GLNGKAFIP IIGFGCNVP +MAAR+IEQP Sbjct: 354 FILFFFISLLEDSGYMARVAMVMDRMMEAIGLNGKAFIPMIIGFGCNVPGVMAARTIEQP 413 Query: 420 KDRMLTTLLMPLMSCSARLPVYLLFAAVFFPAQQATAVLAMYVLGVAFALILCKLFSKHL 479 K+R+LT LL+P MSCSARLPVY LFA FF +QA V ++YVLG+ AL L KLFS L Sbjct: 414 KERLLTILLLPFMSCSARLPVYALFAGTFFVREQALVVFSLYVLGIVVALGLAKLFSSTL 473 Query: 480 FKNESSIFIIELPPYRMPQLKTLGRSTWEKGKGFLRKAGTIILAGSVIIWLMSYAGPSGL 539 KNESS+F+IELPPYR+PQ TL RSTWEKGKGF+RKAGT I GSV IWL++Y GP G+ Sbjct: 474 LKNESSLFVIELPPYRVPQALTLWRSTWEKGKGFVRKAGTFIFGGSVAIWLLTYIGPHGV 533 Query: 540 NVEMDNSFLAKFGGLIAPLLHPLGFGTWQAGSTLVPGFLAKEVVVSTMNIIYHAPDAAGL 599 V MD+SFLA GGLIAPLL PLGFG WQAG+ L+ GFLAKEVVVSTMNIIYH +A GL Sbjct: 534 GVAMDDSFLAAIGGLIAPLLAPLGFGAWQAGAALITGFLAKEVVVSTMNIIYHVHEANGL 593 Query: 600 EGQISQVFTPLSSVSFMAFILLYIPCLATVGVIRKETASWKWTFFSMGXXXXXXXXXXXX 659 + I+ FTPLS+ SFM F+LLY PCLATV IRKET + KWT S+G Sbjct: 594 KQVIASHFTPLSAFSFMVFVLLYTPCLATVAAIRKETGARKWTLLSIGCALTVAYVISFA 653 Query: 660 IFQGGSLLGLS 670 ++Q G +LG S Sbjct: 654 VYQFGHMLGYS 664 >C3J5T9.1 C3J5T9_9BACI Ferrous iron transport protein B Length = 664 Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust. Identities = 358/671 (53%), Positives = 446/671 (66%), Gaps = 8/671 (1%) Query: 1 MSSIALLGNPNTGKTSLFNTLTSSYEYVGNWAGVTVEKKIGSLKNGAGKLIDLPGIYSLH 60 MS +AL GNPNTGKTSLFN LT SYEYVGNW+GVTVEKK+G L+ ++DLPGIYSL Sbjct: 1 MSYVALFGNPNTGKTSLFNCLTGSYEYVGNWSGVTVEKKVGVLRQHGVPVVDLPGIYSLQ 60 Query: 61 PLSRDEGVATQYLIEESPEALINIVDASQXXXXXXXXXXXXEYGKPTVLGLNMIDVAKAR 120 PLSRDEGVAT +L+ E A++NIVDASQ E+G+P ++ LNM+DVA+ R Sbjct: 61 PLSRDEGVATDFLLTEPCSAIVNIVDASQLKRNLHLTVQLLEFGRPLIIALNMVDVAEKR 120 Query: 121 GIAVNHEVLQSRLGITVLPLIARTGKGSGQVLSILEKASTIPQVTFRLDYGELTEEAIAS 180 G+ ++ L S LG+ V+P+IARTGKG+ ++ I+ +DYG E AI Sbjct: 121 GVKIDAAKLSSHLGVPVVPVIARTGKGTKELSRIILSTKDGHHSRIFIDYGVEVERAIRR 180 Query: 181 IVTEL-KSIPGLPNLRWVALQLMEQNPVVLELLKKRMDISRLLVICDGCQNALQSSKQAL 239 I +L +PG + RW+ALQ +E N + L+ R+D+S LL + L SS Sbjct: 181 IAEQLPDDVPG--DKRWMALQFLEGNERIAAYLRGRLDLSPLLEARAEAEQKLGSS---- 234 Query: 240 TLPQWIRSVRMDYIRSLCAAVMDTTLLKPHNLTERLDSILTHRFLGLPLFIFFMYAMFKT 299 + + I R +I A KP TE++D+++T+R++GLP+F+ MY +F Sbjct: 235 -VAEQIYETRDRWIGEAIAVAAIALDNKPLTWTEKIDAVVTNRYVGLPIFLALMYIVFML 293 Query: 300 TFDWVGGPLSDLVDGLISGPISTGASSLLQTVGASDFTHALXXXXXXXXXXXXXXXXXXX 359 TFDW+G PL+D +D SGP++ S LL GAS F AL Sbjct: 294 TFDWLGTPLADRLDAFFSGPLTDWLSRLLTWAGASPFIEALVLDGIVAGVGGVLVFVPQI 353 Query: 360 FILFLMISFLEDSGYMARVCLLMDSTMERMGLNGKAFIPFIIGFGCNVPAIMAARSIEQP 419 FILF IS LEDSGYMARV ++MD ME +GLNGKAFIP IIGFGCNVP +MAAR+IEQP Sbjct: 354 FILFFFISLLEDSGYMARVAMVMDRMMEAIGLNGKAFIPMIIGFGCNVPGVMAARTIEQP 413 Query: 420 KDRMLTTLLMPLMSCSARLPVYLLFAAVFFPAQQATAVLAMYVLGVAFALILCKLFSKHL 479 K+R+LT L +P MSCSARLPVY LFA FF +QA V ++YVLG+A AL + KLFS L Sbjct: 414 KERLLTILALPFMSCSARLPVYALFAGTFFVREQALVVFSLYVLGIAVALGVAKLFSSTL 473 Query: 480 FKNESSIFIIELPPYRMPQLKTLGRSTWEKGKGFLRKAGTIILAGSVIIWLMSYAGPSGL 539 KNESS+F+IELPPYR+PQ TL RSTWEKGKGF+RKAGT I GSV IWL++Y GP G+ Sbjct: 474 LKNESSLFVIELPPYRVPQALTLWRSTWEKGKGFVRKAGTFIFGGSVAIWLLTYIGPHGV 533 Query: 540 NVEMDNSFLAKFGGLIAPLLHPLGFGTWQAGSTLVPGFLAKEVVVSTMNIIYHAPDAAGL 599 V MD+SFLA GGLIAPLL PLGFG WQAG+ L+ GFLAKEVVVSTMNIIYH +A GL Sbjct: 534 GVAMDDSFLAAIGGLIAPLLAPLGFGAWQAGAALITGFLAKEVVVSTMNIIYHVHEANGL 593 Query: 600 EGQISQVFTPLSSVSFMAFILLYIPCLATVGVIRKETASWKWTFFSMGXXXXXXXXXXXX 659 + I+ FTPLS+ SFM F+LLY PCLATV IRKET S KWT S+G Sbjct: 594 KQVIASHFTPLSAFSFMVFVLLYTPCLATVAAIRKETGSRKWTLLSIGCALTVAYVISFA 653 Query: 660 IFQGGSLLGLS 670 ++Q G +LG S Sbjct: 654 VYQFGHMLGYS 664 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.139 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,590,671,980 Number of extensions: 140375768 Number of successful extensions: 391461 Number of sequences better than 1.0e-05: 1430 Number of HSP's gapped: 384861 Number of HSP's successfully gapped: 2025 Length of query: 670 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 527 Effective length of database: 1,713,491,058 Effective search space: 903009787566 Effective search space used: 903009787566 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (22.0 bits) S2: 135 (56.6 bits)