BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0076.p (165 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KB27.1 B3KB27_9BACI Alkyl hydroperoxide reductase/ Thiol speci... 289 6e-77 B1DL43.1 B1DL43_9BACL Alkyl hydroperoxide reductase/ Thiol speci... 286 5e-76 A8ML42.1 A8ML42_ALKOO Alkyl hydroperoxide reductase/ Thiol speci... 251 1e-65 Q67QY2.1 Q67QY2_SYMTH 2-cys peroxiredoxin 241 2e-62 A6TW34.1 A6TW34_ALKMQ Alkyl hydroperoxide reductase/ Thiol speci... 239 4e-62 >B3KB27.1 B3KB27_9BACI Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Length = 174 Score = 289 bits (739), Expect = 6e-77, Method: Compositional matrix adjust. Identities = 136/157 (86%), Positives = 145/157 (92%) Query: 9 KDFGKVSLSDYRGKWLVFFFYPLDFTFVCPTEITALSEAAAEFTALDTEILGVSIDSVHS 68 K KVSLSDYRGKWLVFFFYPLDFTFVCPTEITALS+A +F ALDTEILGVS+DS+HS Sbjct: 18 KILAKVSLSDYRGKWLVFFFYPLDFTFVCPTEITALSDAYDQFKALDTEILGVSVDSIHS 77 Query: 69 HKAWITTPKDSNGLGPINFPLASDITKKVASDYGVLIEEEGVALRGLFIIDPDGELKYQV 128 HKAWI T K++NGLG +NFPLASDITK VA DYGVLIEEEGVALRGL+IIDP+GELKYQV Sbjct: 78 HKAWINTAKEANGLGALNFPLASDITKNVARDYGVLIEEEGVALRGLYIIDPEGELKYQV 137 Query: 129 VNHNDVGRSVEETLRVLQALQSGGLCAMNWKPGDKNL 165 VNHNDVGRSVEETLRVLQALQSGGLCAMNWKPGD NL Sbjct: 138 VNHNDVGRSVEETLRVLQALQSGGLCAMNWKPGDSNL 174 >B1DL43.1 B1DL43_9BACL Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Length = 182 Score = 286 bits (731), Expect = 5e-76, Method: Compositional matrix adjust. Identities = 132/165 (80%), Positives = 149/165 (90%) Query: 1 METVTGDGKDFGKVSLSDYRGKWLVFFFYPLDFTFVCPTEITALSEAAAEFTALDTEILG 60 M+T TGDGKDFG SL+DY+GKWLV FFYPLDFTFVCPTEITALS A+ +F AL+TE+LG Sbjct: 15 MDTATGDGKDFGTASLADYKGKWLVLFFYPLDFTFVCPTEITALSLASEQFKALNTEVLG 74 Query: 61 VSIDSVHSHKAWITTPKDSNGLGPINFPLASDITKKVASDYGVLIEEEGVALRGLFIIDP 120 VS+DS HSH+AWI TP + NGLG +NFPLA+DITK VA DYGVLIEEEGVALRGL+IIDP Sbjct: 75 VSVDSKHSHRAWINTPVNDNGLGELNFPLAADITKSVARDYGVLIEEEGVALRGLYIIDP 134 Query: 121 DGELKYQVVNHNDVGRSVEETLRVLQALQSGGLCAMNWKPGDKNL 165 +GE+KYQVVNHNDVGRSV+ETLRVLQALQSGGLC MNWKPG +NL Sbjct: 135 EGEVKYQVVNHNDVGRSVDETLRVLQALQSGGLCPMNWKPGQQNL 179 >A8ML42.1 A8ML42_ALKOO Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Length = 179 Score = 251 bits (641), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 118/165 (71%), Positives = 134/165 (81%) Query: 1 METVTGDGKDFGKVSLSDYRGKWLVFFFYPLDFTFVCPTEITALSEAAAEFTALDTEILG 60 M T GDGKDFGK+SL DY+GKWLV FFYPLDFTFVCPTEITA+S+ AEF L+ EILG Sbjct: 15 MNTANGDGKDFGKISLEDYKGKWLVMFFYPLDFTFVCPTEITAISKRVAEFNKLNAEILG 74 Query: 61 VSIDSVHSHKAWITTPKDSNGLGPINFPLASDITKKVASDYGVLIEEEGVALRGLFIIDP 120 VS DS HSHKAWI +D GLG I FPLASD T+ VA DYG+LIEEEG+ALRGLFIIDP Sbjct: 75 VSTDSEHSHKAWINAAQDKGGLGQITFPLASDRTQSVARDYGILIEEEGIALRGLFIIDP 134 Query: 121 DGELKYQVVNHNDVGRSVEETLRVLQALQSGGLCAMNWKPGDKNL 165 +G L+Y VV+ +VGRSV+ETLRVLQ LQSGGLC ++W PGD L Sbjct: 135 EGVLRYSVVHDLNVGRSVDETLRVLQGLQSGGLCPIDWHPGDNTL 179 >Q67QY2.1 Q67QY2_SYMTH 2-cys peroxiredoxin Length = 179 Score = 241 bits (614), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 110/153 (71%), Positives = 132/153 (86%) Query: 13 KVSLSDYRGKWLVFFFYPLDFTFVCPTEITALSEAAAEFTALDTEILGVSIDSVHSHKAW 72 KVSLSDY+GKWL+ FFYP DFTFVCPTEITA ++ EF + EILGVS+DSV+SH+AW Sbjct: 25 KVSLSDYKGKWLILFFYPADFTFVCPTEITAFNDRVQEFQDANCEILGVSVDSVYSHRAW 84 Query: 73 ITTPKDSNGLGPINFPLASDITKKVASDYGVLIEEEGVALRGLFIIDPDGELKYQVVNHN 132 I TPK+ GLGP+N+PLASDITK+V+ YGVLIEEEGVALRGLFIIDPDG ++YQVV+ N Sbjct: 85 IKTPKEEGGLGPVNYPLASDITKEVSRAYGVLIEEEGVALRGLFIIDPDGIVRYQVVHDN 144 Query: 133 DVGRSVEETLRVLQALQSGGLCAMNWKPGDKNL 165 ++GR+V+E LRVL+ALQ+GGLCA NWKPGD L Sbjct: 145 NIGRNVDEVLRVLEALQAGGLCAANWKPGDALL 177 >A6TW34.1 A6TW34_ALKMQ Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen Length = 179 Score = 239 bits (611), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 111/165 (67%), Positives = 133/165 (80%) Query: 1 METVTGDGKDFGKVSLSDYRGKWLVFFFYPLDFTFVCPTEITALSEAAAEFTALDTEILG 60 M+TV G+G +FGKVSL DY+G+WLV FFYPLDFTFVCPTEIT ++E +F L+ +LG Sbjct: 15 MKTVDGEGMEFGKVSLDDYKGQWLVLFFYPLDFTFVCPTEITGINERLVDFGRLNASVLG 74 Query: 61 VSIDSVHSHKAWITTPKDSNGLGPINFPLASDITKKVASDYGVLIEEEGVALRGLFIIDP 120 S DS HSHKAWI +D GLG ++FPLASD+T+KVA DYG+LIEEEG+ALRGLFIIDP Sbjct: 75 ASTDSEHSHKAWINAAQDQGGLGKLSFPLASDMTQKVARDYGILIEEEGIALRGLFIIDP 134 Query: 121 DGELKYQVVNHNDVGRSVEETLRVLQALQSGGLCAMNWKPGDKNL 165 +G L+Y VV+ +VGRSVEETLRVLQ LQSGGLC NW PG+ L Sbjct: 135 EGILRYSVVHDLNVGRSVEETLRVLQGLQSGGLCPFNWSPGEDML 179 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.137 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,044,176,157 Number of extensions: 39892220 Number of successful extensions: 95728 Number of sequences better than 1.0e-05: 3724 Number of HSP's gapped: 92930 Number of HSP's successfully gapped: 3724 Length of query: 165 Length of database: 3,060,696,203 Length adjustment: 125 Effective length of query: 40 Effective length of database: 1,883,069,328 Effective search space: 75322773120 Effective search space used: 75322773120 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 125 (52.8 bits)