BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0024.p (700 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DFC4.1 B1DFC4_9BACL YhgE/Pip N-terminal domain protein 876 0.0 B3KEA4.1 B3KEA4_9BACI YhgE/Pip N-terminal domain protein 577 e-162 B1DCP6.1 B1DCP6_9BACL YhgE/Pip N-terminal domain protein 549 e-154 B7GF01.1 B7GF01_ANOFW Predicted membrane protein 451 e-124 C3J3W7.1 C3J3W7_9BACI YhgE/Pip C-terminal domain protein 441 e-121 >B1DFC4.1 B1DFC4_9BACL YhgE/Pip N-terminal domain protein Length = 696 Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust. Identities = 436/689 (63%), Positives = 522/689 (75%) Query: 4 MKVITVFLKDMKIXXXXXXXXXXXXGVAALPMLYSSFLVDASWDPYGNTGKLPVAVVNLD 63 M+ I VFLKDMK GVA LPMLYSS L+D S DPYG T KLPVAVVNLD Sbjct: 1 MRPIQVFLKDMKTLATKRMLLLSFIGVALLPMLYSSILIDGSMDPYGQTSKLPVAVVNLD 60 Query: 64 KGAVYEGKSMEVGKDFVDELKDNDDFKWNFVNAAEAEDGMAHNRYYMTITIPANFSENAT 123 KGA YEGK+M VGKDFV+ELK +D+FKW+FVN +A+DGM HN YYMTIT+P NFSENA Sbjct: 61 KGATYEGKTMNVGKDFVEELKKSDNFKWDFVNEEQAKDGMEHNDYYMTITVPNNFSENAA 120 Query: 124 TLTAEHPVQAEIVFEPNSDYNFVAGQIGNSAMSKLKAKLSTQITAAYTRSMFEQVDTISQ 183 TLT E+PVQAE++FEPNS YNFVAGQIGNSAM +L++KL+TQIT AYTRSMFEQV TIS Sbjct: 121 TLTQENPVQAELIFEPNSQYNFVAGQIGNSAMKELRSKLNTQITEAYTRSMFEQVGTISD 180 Query: 184 GLGDAGEGATKLKDGAGKLQGGLATLKTNLNKLASGTTELQSGLKLLYNGAXXXXXXXXX 243 GLG AGEGAT+LKDGAGKL+ G+ TLK NLNKLASGT+EL G+ LY+GA Sbjct: 181 GLGKAGEGATELKDGAGKLEDGITTLKENLNKLASGTSELSGGVSKLYDGAASLSQGTSQ 240 Query: 244 XXXXXXXXXXXXXXXVKAEQQLQAGAVQSQKGAAQLNEGLLASKTGSSQLKEGLTASEAA 303 AEQQL+ GA QS+ GAAQL EGL +SK G+++LK+GLTAS A Sbjct: 241 LSSGASGLAGGLGQLSAAEQQLENGASQSKAGAAQLAEGLKSSKDGAAELKQGLTASSAE 300 Query: 304 SSQLAAGADQVAKGLEQMMAATPGLQENEQFQQLLAASRQVAAGSQQLHTGQEQLLAGST 363 S Q+A GADQVAKGLEQ+MA +P LQ+NE +QLLAAS+QVAAGS QL GQE+LLAGS+ Sbjct: 301 SGQVADGADQVAKGLEQLMAGSPELQDNETLKQLLAASKQVAAGSAQLKDGQEKLLAGSS 360 Query: 364 KLDSXXXXXXXXXXXXSDGGSQLATGLQTFGQKLNQXXXXXXXXXXXXXXXXXXXVQLGQ 423 KL S G +LA GL+TFG KL + QL Sbjct: 361 KLAQGQEQLYVGANSLSQGQEKLAAGLETFGGKLKEAGTGAEQLAAGAKAANSGASQLKD 420 Query: 424 GLTKLAGGVDGLSEGAVKLKDGAGELNDGAGKLASGSGELAEKLTDAAADTSSVKSGDDT 483 GL KL+GGV+G+++G+ +L GAG+L DG+ +L +GSGELA KL DAAA+T S+K GD+ Sbjct: 421 GLGKLSGGVEGIADGSKQLNQGAGQLKDGSAQLVNGSGELAAKLNDAAAETGSIKDGDNI 480 Query: 484 VSMFAEPVKLTEKTDHKLDHYGLGIAPYFLSLALFVGALVFSTVFSLRDSNVPGASPMGR 543 V+MFAEPV + E DHKLD YGLGIAPYFLSLALF+GALV++TVFS+RDS GASPMGR Sbjct: 481 VNMFAEPVVVKENADHKLDRYGLGIAPYFLSLALFMGALVYTTVFSVRDSYTLGASPMGR 540 Query: 544 FLSRTLTFVMVSILQSLLADIVLLYGLKLEVQSVPLFFLFTLIVSFSFTMIVQALVTWLD 603 F+SRTLT+V +S+LQSL+AD V+LYGLK++V SVPLF +FT++ S ++T I+QALVTWLD Sbjct: 541 FMSRTLTYVTISLLQSLIADAVILYGLKIDVTSVPLFVIFTILTSLAYTFIIQALVTWLD 600 Query: 604 NPGRFLAIVLMIFQLTSSAGTFPLEMLPGWMQKVNPWLPMTHSIVGYKAIIGSGDYALMR 663 NPGRFL ++LMIFQLTSSAGTFPLE+LP WMQK+NPWLPMTH+I G+K II SGDYALMR Sbjct: 601 NPGRFLVVLLMIFQLTSSAGTFPLELLPDWMQKLNPWLPMTHAITGFKTIIASGDYALMR 660 Query: 664 EQIVYLLIYAVIFLALTFLYFARQNKRTA 692 EQ++ L +AV+FLALTFLYF RQ+K A Sbjct: 661 EQMLVLGAFAVVFLALTFLYFKRQSKSPA 689 >B3KEA4.1 B3KEA4_9BACI YhgE/Pip N-terminal domain protein Length = 755 Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust. Identities = 318/745 (42%), Positives = 438/745 (58%), Gaps = 58/745 (7%) Query: 4 MKVITVFLKDMKIXXXXXXXXXXXXGVAALPMLYSSFLVDASWDPYGNTGKLPVAVVNLD 63 MK ++VF KD+ V +P++YS + A WDPYG LPVAVVN D Sbjct: 1 MKSLSVFAKDLGAAVRNKKILIPIIAVLFIPVMYSGMFLGAFWDPYGKMEDLPVAVVNND 60 Query: 64 KGAVYEGKSMEVGKDFVDELKDNDDFKWNFVNAAEAEDGMAHNRYYMTITIPANFSENAT 123 +GAV+EGK++ G+D V ELK DF W FVN +EAE GM N+YYMTI+IP NFS+ AT Sbjct: 61 QGAVFEGKTLHAGEDLVAELKKGKDFNWQFVNRSEAEQGMQDNKYYMTISIPENFSQQAT 120 Query: 124 TLTAEHPVQAEIVFEPNSDYNFVAGQIGNSAMSKLKAKLSTQITAAYTRSMFEQVDTISQ 183 TL EHP A+IVFEPN YNF+A QIG SA+ ++++K+S ++T AYT ++F+QV +S Sbjct: 121 TLMDEHPQPAQIVFEPNEGYNFLAAQIGGSAVKQIQSKVSAKVTEAYTETLFDQVAKVSD 180 Query: 184 GLGDAGEGATKLKDGAGKLQGGLATLKTNLNKLASGTTELQSGLKLLYNGAXXXXXXXXX 243 GL +AG+GATKL +GA KL G LK NL KL SGT ELQ G+ L G Sbjct: 181 GLSEAGDGATKLSEGAVKLDDGAVKLKENLAKLVSGTQELQDGIAPLTQGVQELNNGAGK 240 Query: 244 XXXXXXXXXXXXXXXVKAEQQLQAGAVQSQKGAAQLNEGLLASKTGSSQLKEG------- 296 A QLQAGA ++ KG A+L G+ ++ GS+ L EG Sbjct: 241 LNTGAGSLASGLDQLKAAHSQLQAGAEEAAKGGAKLQAGIESAAAGSTALNEGLQANQAG 300 Query: 297 ---------------------LTASEAASSQLAAGADQVAKGLEQMMAATPGLQENEQFQ 335 L S A++ L GA VA GL+Q+ P L ++ + Q Sbjct: 301 AAQLAAGAKSAHDGSGSLKAGLNQSLEATAALEQGAKAVADGLKQLAEGNPELMQSPEVQ 360 Query: 336 QLLAASRQVAAGSQQLHTGQEQLLAGSTKLDSXXXXXXXXXXXXS-------DGG----- 383 +LLAAS+ VA+G+ +L+ GQ+QL G+ +L+ S DGG Sbjct: 361 KLLAASQSVASGTNELNAGQKQLAQGAAELNQGTQQLQEGAGKLSAGANQLADGGKQLAA 420 Query: 384 ----------------SQLATGLQTFGQKLNQXXXXXXXXXXXXXXXXXXXVQLGQGLTK 427 +QLA G++ FG KL++ QL G K Sbjct: 421 GGQELLAGAKQLNAGQNQLADGMKLFGTKLSEAAAGGKELASGAAALSQGTQQLAGGAGK 480 Query: 428 LAGGVDGLSEGAVKLKDGAGELNDGAGKLASGSGELAEKLTDAAADTSSVKSGDDTVSMF 487 L GV L++G+ +L GAGEL +G +L GSGELA KL +AA T +++ D+TV+MF Sbjct: 481 LGSGVTTLADGSKQLDSGAGELVNGMNELKEGSGELAGKLNEAADKTGGIQTTDETVTMF 540 Query: 488 AEPVKLTEKTDHKLDHYGLGIAPYFLSLALFVGALVFSTVFSLRDSNVPGASPMGRFLSR 547 A PV++ E +++ +YG G APYFLSL LFVGAL+ + + +R+++VP AS RF+SR Sbjct: 541 AGPVQVDEHKVNEVPNYGTGFAPYFLSLGLFVGALLCTIILPIREASVPNASGWNRFVSR 600 Query: 548 TLTFVMVSILQSLLADIVLLYGLKLEVQSVPLFFLFTLIVSFSFTMIVQALVTWLDNPGR 607 TL+F + ++Q+LLA +V+LYGLKLEVQSVPLF+LF++I S SF +VQ VTWLD PGR Sbjct: 601 TLSFAGMGLIQALLASVVMLYGLKLEVQSVPLFYLFSIITSLSFMFLVQMFVTWLDQPGR 660 Query: 608 FLAIVLMIFQLTSSAGTFPLEMLPGWMQKVNPWLPMTHSIVGYKAIIGSGDYALMREQIV 667 F+ IV++I QLT+SAGTFP+E++P WM+ +NP LPMT+S+ GYK +I +G + M + Sbjct: 661 FVVIVILILQLTTSAGTFPVELIPNWMKALNPLLPMTYSVKGYKDVISTGSFDGMWANVG 720 Query: 668 YLLIYAVIFLALTFLYF--ARQNKR 690 L + ++FL LT +YF R NK+ Sbjct: 721 VLAGFGLVFLVLTAVYFLAIRNNKQ 745 >B1DCP6.1 B1DCP6_9BACL YhgE/Pip N-terminal domain protein Length = 726 Score = 549 bits (1415), Expect = e-154, Method: Compositional matrix adjust. Identities = 309/710 (43%), Positives = 413/710 (58%), Gaps = 28/710 (3%) Query: 9 VFLKDMKIXXXXXXXXXXXXGVAALPMLYSSFLVDASWDPYGNTGKLPVAVVNLDKGAVY 68 VF KD+ GV+ +PMLY FL+ +WDPYG LPVAVVNLDKGA Y Sbjct: 7 VFKKDLGYFLKNRMLIITFLGVSIVPMLYGGFLIKGNWDPYGKLQNLPVAVVNLDKGAEY 66 Query: 69 EGKSMEVGKDFVDELKDNDDFKWNFVNAAEAEDGMAHNRYYMTITIPANFSENATTLTAE 128 +GK+M VG+DFV ELK+N+ F W FV+ A +GM N+YY TITIP NFSE+A++LT++ Sbjct: 67 QGKAMNVGEDFVKELKENETFDWRFVSEQAAREGMVSNQYYATITIPDNFSEHASSLTSD 126 Query: 129 HPVQAEIVFEPNSDYNFVAGQIGNSAMSKLKAKLSTQITAAYTRSMFEQVDTISQGLGDA 188 P +A+I+FE NS YNF++GQI +A +L+ KLS +T AY+RSM Q +S GL Sbjct: 127 TPQKADIIFESNSFYNFISGQISENATKELRNKLSQNLTEAYSRSMLSQFSELSSGLSRL 186 Query: 189 GEGATKLKDGAGKLQGGLATLKTNLNKLASGTTELQSGLKLLYNGAXXXXXXXXXXXXXX 248 GA+ L DG +L+ G TL L +L+ G +L + + L +GA Sbjct: 187 AAGASDLHDGTLQLKNGAGTLSGKLQELSGGAAKLHASVGQLESGASELNAGLSKLSSSA 246 Query: 249 XXXXXXXXXXVKAEQQLQAGAVQSQKGAAQLNEGLLASKTGSSQLKEGLTASEAASSQLA 308 A QL+ GA + G+ QL +G+ ++K+G+ L GL S A S QL Sbjct: 247 ETLSTGASQLGTASTQLKQGADKLADGSGQLKDGIQSAKSGADDLYAGLQQSAAGSKQLQ 306 Query: 309 AG--------------ADQVAKGLEQMMAATPGLQENEQFQQLLAASRQVAAGSQQLHTG 354 G + QVA GL+Q+ L + Q+LLAAS+ VA G+++L G Sbjct: 307 TGLTASAAASEALEDGSAQVAAGLKQLAENNAELAADPAMQKLLAASQAVAGGAKELSKG 366 Query: 355 QEQLLAGSTKLDSXXXXXXXXXXXXSDG-------GSQLATGLQTFGQKLNQXXXXXXXX 407 Q++LL GS L++ S G SQLA+ L+Q Sbjct: 367 QQELLTGSRTLNAGQQKLLAGSKQLSSGQSKLLQSASQLASAQDQLRDGLSQMAAKFPAF 426 Query: 408 XXXXXXXXXXXVQLGQGLTKLAGGVD-------GLSEGAVKLKDGAGELNDGAGKLASGS 460 QL QG KL G+ L+ GA +L GAGEL GA KLA+GS Sbjct: 427 VSGSKQLGQGAGQLAQGSEKLKSGISQFEAGGASLASGASQLASGAGELTTGADKLATGS 486 Query: 461 GELAEKLTDAAADTSSVKSGDDTVSMFAEPVKLTEKTDHKLDHYGLGIAPYFLSLALFVG 520 +LA+ L AA T+S+K+ + T+ M AEPV + D K+ Y GIAPYFLS+ALF G Sbjct: 487 QQLADNLASAAEQTASLKADEKTIQMIAEPVTIVANDDRKVRLYANGIAPYFLSMALFAG 546 Query: 521 ALVFSTVFSLRDSNVPGASPMGRFLSRTLTFVMVSILQSLLADIVLLYGLKLEVQSVPLF 580 +LVF+T+FS R S+ A FLS+ LTF ++S+ QSL+ V+LY L L+VQSVPLF Sbjct: 547 SLVFTTMFSARQSSSAEADGFPLFLSKLLTFGVMSLAQSLILSTVILYVLGLKVQSVPLF 606 Query: 581 FLFTLIVSFSFTMIVQALVTWLDNPGRFLAIVLMIFQLTSSAGTFPLEMLPGWMQKVNPW 640 +L+T++ F+F +VQA VTWLDNPGRF+ ++LMIFQL SSAGTFP E+LPGW Q +NPW Sbjct: 607 YLYTVLTGFTFMFVVQAFVTWLDNPGRFVVLLLMIFQLVSSAGTFPYELLPGWAQAMNPW 666 Query: 641 LPMTHSIVGYKAIIGSGDYALMREQIVYLLIYAVIFLALTFLYFARQNKR 690 LPMT+SI GY+ +I SGD+A M Q L Y VIF+ LT LYFA K+ Sbjct: 667 LPMTYSIRGYRDVISSGDFAHMWAQAGRLAFYVVIFILLTSLYFALTKKQ 716 >B7GF01.1 B7GF01_ANOFW Predicted membrane protein Length = 768 Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust. Identities = 272/756 (35%), Positives = 392/756 (51%), Gaps = 69/756 (9%) Query: 4 MKVITVFLKDMKIXXXXXXXXXXXXGVAALPMLYSSFLVDASWDPYGNTGKLPVAVVNLD 63 M +F+K++K V +P+LYS + A WDPY + LPVAVVN D Sbjct: 1 MPTFQLFIKEIKAITSNRKVLIPVIAVLFIPLLYSGMFLWAFWDPYEHLDDLPVAVVNND 60 Query: 64 KGAVYEGKSMEVGKDFVDELKDNDDFKWNFVNAAEAEDGMAHNRYYMTITIPANFSENAT 123 KGA +EG+ + +G D VD+LK+ F W+FV+ +E E G+ RYYM I IP +FSENAT Sbjct: 61 KGATFEGEELHIGDDLVDKLKEKKQFDWHFVSQSEGEKGLKEQRYYMLIEIPEDFSENAT 120 Query: 124 TLTAEHPVQAEIVFEPNSDYNFVAGQIGNSAMSKLKAKLSTQITAAYTRSMFEQVDTISQ 183 TL +HP + +++++PN +NF++ QIG +A+ K+K +++ +T Y +MFE V T++ Sbjct: 121 TLQDDHPKKLQLIYKPNEGFNFLSAQIGGTAVEKIKTEVAKTLTETYAENMFESVRTLAD 180 Query: 184 GLGDAGEGATKLKDGAGKLQGGLATLKTNLNKLASGTTELQSGLKLL-------YNGAXX 236 GL A +GA KL DG + G L + K G+ EL L L NG Sbjct: 181 GLTKASDGAKKLHDGLHDAKDGTNKLYDGMKKAQDGSNELYHHLATLAEKSIAFTNGLHQ 240 Query: 237 XXXXXXXXXXXXXXXXXXXXXXVKAEQQLQAGAVQSQKGAAQLNEG----LLASKT---- 288 V + QL GA Q+++G +L G L +K Sbjct: 241 AADGSQQVQAGVQTLHDGMTRMVDGQGQLVIGAKQAKEGTEKLASGADRILEGTKALDAR 300 Query: 289 ------GSSQLKEG-------LTASEAASSQLAAGADQVAKGLEQMMAATPGL------- 328 GS QL EG L+ + ++Q+ AGA QV GLE+++A L Sbjct: 301 IPQFLQGSEQLSEGTEKLATSLSQWQQGATQVQAGATQVTSGLEKLVATLDTLIQTSDPM 360 Query: 329 ------QENEQFQQLLAASRQVAAGSQQLHTGQEQLLAGSTK--------------LDSX 368 Q + QL S+QV G QL+ G + L AG+T LD Sbjct: 361 QKAVYEQLKQNVVQLSLGSKQVENGVAQLNDGAKALQAGATSLSAGAKQLHEGHIALDRG 420 Query: 369 XXXXXXXXXXXSDGGSQLATGLQTFGQKLNQXXXXXXXXXXXXXXXXXXXVQLGQGLTKL 428 S+G QLA G ++ L GL L Sbjct: 421 VDELLAGQQQLSNGAHQLANGQDKLVAGMSTLYEKMQEAEQGVAKLADGGQTLVLGLQTL 480 Query: 429 AGGVDGLSEGAVKLKDGAGELN--------------DGAGKLASGSGELAEKLTDAAADT 474 A G D L +GA +L DG+ +L+ DG +L GS ELA+KL + A + Sbjct: 481 ADGADQLQDGAHRLADGSQQLSNGMSELTNGTEKLQDGMKQLTDGSAELADKLREGAEEA 540 Query: 475 SSVKSGDDTVSMFAEPVKLTEKTDHKLDHYGLGIAPYFLSLALFVGALVFSTVFSLRDSN 534 +VK+ +D +MFAEPVK+ + +++ +YG G PYFLSL LFVGAL+ S VF LR+ Sbjct: 541 GNVKANEDVYNMFAEPVKVKNEKINEVPNYGTGFTPYFLSLGLFVGALLLSIVFPLREPA 600 Query: 535 VPGASPMGRFLSRTLTFVMVSILQSLLADIVLLYGLKLEVQSVPLFFLFTLIVSFSFTMI 594 SP F ++ + V I Q+L AD VLL+GL L+V+SVPLF LF+++ S +F + Sbjct: 601 AAPRSPFQWFFAKFGVLIGVGIFQALFADSVLLFGLDLQVESVPLFILFSVVTSITFLSV 660 Query: 595 VQALVTWLDNPGRFLAIVLMIFQLTSSAGTFPLEMLPGWMQKVNPWLPMTHSIVGYKAII 654 +Q LVT +PGRF+AI+ +I QLT+SAGTFPLE++P +Q N WLPMT+S+ G+KA+I Sbjct: 661 IQFLVTVFGDPGRFIAIIALILQLTTSAGTFPLELIPRSLQHFNAWLPMTYSVFGFKAVI 720 Query: 655 GSGDYALMREQIVYLLIYAVIFLALTFLYFARQNKR 690 SGD++ M E + L ++ V+ +A T YF Q++R Sbjct: 721 SSGDFSFMWENVGKLCMFIVVMIAGTMTYFTIQHRR 756 >C3J3W7.1 C3J3W7_9BACI YhgE/Pip C-terminal domain protein Length = 769 Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust. Identities = 269/767 (35%), Positives = 394/767 (51%), Gaps = 72/767 (9%) Query: 4 MKVITVFLKDMKIXXXXXXXXXXXXGVAALPMLYSSFLVDASWDPYGNTGKLPVAVVNLD 63 M ++++++K V +P+LYS + A WDPY + +LPVAVVN D Sbjct: 1 MHAFQLWMQELKAVTSNRKVLIPIMAVLFIPLLYSGMFLWAFWDPYDHLDELPVAVVNKD 60 Query: 64 KGAVYEGKSMEVGKDFVDELKDNDDFKWNFVNAAEAEDGMAHNRYYMTITIPANFSENAT 123 KG +EGK +G D V++LK+ F W+FVN E E G+ +YYM I IP +FS+NAT Sbjct: 61 KGTTFEGKEFHLGDDLVEKLKEKKQFDWHFVNEREGEKGLKEQKYYMLIQIPEDFSQNAT 120 Query: 124 TLTAEHPVQAEIVFEPNSDYNFVAGQIGNSAMSKLKAKLSTQITAAYTRSMFEQVDTISQ 183 TL +HP + +++++PN +NF++ QIG +A+ K+K +++ +T Y +MFE + T++ Sbjct: 121 TLQDDHPKKLQLIYKPNEGFNFLSAQIGGTAVEKIKTEVAKTLTETYAENMFENIQTLAD 180 Query: 184 GLGDAGEGATKLKDGAGKLQGGLATLKTNLNKLASGTTELQSGLKLL-------YNGAXX 236 GL A +GA +L DG G+ + G L + K G+ +L L L +G Sbjct: 181 GLTKASDGAKQLHDGLGEAKNGTNKLYDGMKKAQDGSKDLHHHLATLAEKSIAFTDGLHQ 240 Query: 237 XXXXXXXXXXXXXXXXXXXXXXVKAEQQLQAGAVQSQKGAAQL-------NEGLLASKT- 288 V + QL GA Q Q+G A L EG+ A Sbjct: 241 AANGSAQVQTGVQMLDNGMKHMVDGQGQLLDGAKQVQEGTANLALGAKRVYEGMQALDAR 300 Query: 289 ------GSSQLKEG-------LTASEAASSQLAAGADQVAKGLEQ-------MMAATPGL 328 GS QL G L + ++Q+ GA QV GLE+ ++A TP Sbjct: 301 MPQLLQGSEQLSVGAEKLASSLAQWQQGAAQVQTGATQVTGGLERLAAQLDALIAQTPDP 360 Query: 329 QENEQFQQLLA-------ASRQV---------------------AAGSQQLHTGQEQLLA 360 + ++QL S+Q+ + G++QLH G L Sbjct: 361 TQKAVYEQLKENVVKLSLGSKQIENGIAQLNDGTKALQSGAASLSGGAKQLHEGHIALDQ 420 Query: 361 GSTKLDSXXXXXXXXXXXXSDGGSQLATGLQTFGQKLNQXXXXXXXXXXXXXXXXXXXVQ 420 G KL S ++G +L G+ T +K+ + Sbjct: 421 GVNKLLSGQQQLVNGANALANGQEKLVAGMNTLHEKMKEAEQGADKLANGGQTLTSGLQV 480 Query: 421 LGQGLTKLAGGVDGLSEGAVKLKDGAGE-------LNDGAGKLASGSGELAEKLTDAAAD 473 L QG +L G L+ G+ +L G E L DG +L GS ELA+KL + A Sbjct: 481 LAQGADRLQDGAHQLANGSQQLASGMNELTSGTRDLQDGMNRLTDGSEELADKLKEGAKK 540 Query: 474 TSSVKSGDDTVSMFAEPVKLTEKTDHKLDHYGLGIAPYFLSLALFVGALVFSTVFSLRD- 532 S VK+ +D MFAEPVK+ + +++ +YG G PYFLSL LFVGAL+ S VF LR+ Sbjct: 541 ASDVKANEDVYDMFAEPVKVKNEKVNEVPNYGTGFTPYFLSLGLFVGALLLSIVFPLREP 600 Query: 533 SNVPGASPMGRFLSRTLTFVMVSILQSLLADIVLLYGLKLEVQSVPLFFLFTLIVSFSFT 592 + VP SP F ++ + V ILQ+LLAD VLLYGL L+V+SVP F LF+++ S +F Sbjct: 601 AGVP-RSPFHWFFAKFGVLIGVGILQALLADSVLLYGLDLQVKSVPFFILFSVVTSITFL 659 Query: 593 MIVQALVTWLDNPGRFLAIVLMIFQLTSSAGTFPLEMLPGWMQKVNPWLPMTHSIVGYKA 652 ++Q LVT +PGRF+ IV++I QLT+SAGTFPLE++P +Q N WLPMT+S+ G+KA Sbjct: 660 SVIQFLVTTFGDPGRFIGIVVLILQLTTSAGTFPLELIPRSLQHFNAWLPMTYSVFGFKA 719 Query: 653 IIGSGDYALMREQIVYLLIYAVIFLALTFLYFARQNKRTAAPSKELA 699 +I SGD++ M E I LL++ V + T YF Q++R A + E A Sbjct: 720 VISSGDFSFMWENIGKLLLFIVAMMVGTMAYFTMQHRRQFATAVEQA 766 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.131 0.364 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,416,873,438 Number of extensions: 133675658 Number of successful extensions: 481661 Number of sequences better than 1.0e-05: 920 Number of HSP's gapped: 464206 Number of HSP's successfully gapped: 1750 Length of query: 700 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 557 Effective length of database: 1,713,491,058 Effective search space: 954414519306 Effective search space used: 954414519306 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 135 (56.6 bits)