BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0021.p (237 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3K809.1 B3K809_9BACI HAD-superfamily hydrolase, subfamily IA, v... 206 2e-51 B1D9E6.1 B1D9E6_9BACL Haloacid dehalogenase domain protein hydro... 196 2e-48 C5EK81.1 C5EK81_9FIRM Putative uncharacterized protein 141 4e-32 A0AG88.1 A0AG88_LISW6 Complete genome 138 4e-31 Q8Y997.1 Q8Y997_LISMO Lmo0635 protein 137 6e-31 >B3K809.1 B3K809_9BACI HAD-superfamily hydrolase, subfamily IA, variant 1 Length = 246 Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 106/225 (47%), Positives = 138/225 (61%), Gaps = 6/225 (2%) Query: 9 AIFFDLDDTLYDHLIPFREAVREVLKPDESHLNYADLFYKVRHHSDLLWPKYXXXXXXX- 67 IFFD+DDTLYDHL PFREAV+E+ PDE+ Y ++++R++SD L + Sbjct: 11 GIFFDVDDTLYDHLAPFREAVQEIASPDET-FPYEAAYHRMRYYSDKLSVELGGAGTAAY 69 Query: 68 ----XXXXXXXXXXAFAEYGLELSREQAAKVQAAYIGRQYSIEMIEGAAEQLQRFISLGH 123 A AE+G+ L+ E+A VQ Y+ QY+I M EGA E L + GH Sbjct: 70 GDAVEDMRRRRFQLALAEFGVRLTLEEAEAVQQTYLDLQYNITMFEGARELLMKLADAGH 129 Query: 124 KVGIITNGPQDHQMSKLRGLGVDRLIPEEMIFISDAVGLAKPDPAIFAHVNRVTGTTAGQ 183 VG+ITNGP +HQM+K+ + + LIPE+ +F+S AVG KPDP IF HVNR TGT Sbjct: 130 VVGLITNGPAEHQMNKIAAMKLGGLIPEDRLFVSGAVGWDKPDPRIFHHVNRQTGTKPEN 189 Query: 184 SLYVGDTWDNDVVGALEAGWKVCWYNPRGRQPGTAHKPSYIFASY 228 S YVGD+W NDVVGAL AGW V W+N R P + +P + ASY Sbjct: 190 SYYVGDSWRNDVVGALAAGWHVIWFNHRSVGPESEQRPQHTVASY 234 >B1D9E6.1 B1D9E6_9BACL Haloacid dehalogenase domain protein hydrolase Length = 243 Score = 196 bits (497), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 98/236 (41%), Positives = 144/236 (61%), Gaps = 7/236 (2%) Query: 7 KLAIFFDLDDTLYDHLIPFREAVREVLKPDESHLNYADLFYKVRHHSDLLWPKY-----X 61 K +FFD+DDTLYDHL PFR+AV ++ D Y + ++++R++SD+L + Sbjct: 9 KKGVFFDVDDTLYDHLSPFRQAVIAIVG-DREGFPYEEAYHRMRYYSDMLSLEMGGAGAM 67 Query: 62 XXXXXXXXXXXXXXXXAFAEYGLELSREQAAKVQAAYIGRQYSIEMIEGAAEQLQRFISL 121 A AE+G+ L EQA+ +QAAYIG Q++I M EGA E ++R + Sbjct: 68 ESGSSTELMRRRRFELALAEFGIALGEEQASAMQAAYIGCQFNIAMFEGAKELIERLVKA 127 Query: 122 GHKVGIITNGPQDHQMSKLRGLGVDRLIPEEMIFISDAVGLAKPDPAIFAHVNRVTGTTA 181 G+ VG++TNG ++HQ+ K+R + +D LIP F+S +G KPD +F HVN TGT Sbjct: 128 GYVVGLLTNGAENHQLRKIRAMELDHLIPPARQFVSGKIGWDKPDIRVFNHVNEATGTRP 187 Query: 182 GQSLYVGDTWDNDVVGALEAGWKVCWYNPRGRQPGT-AHKPSYIFASYREFSELPL 236 S+Y+GD+W NDVVGALEAGW V W+N R P + H P++ +Y + ++L L Sbjct: 188 ENSIYIGDSWRNDVVGALEAGWAVIWFNHREASPESREHTPNHTAVNYEQLAKLLL 243 >C5EK81.1 C5EK81_9FIRM Putative uncharacterized protein Length = 247 Score = 141 bits (356), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 81/214 (37%), Positives = 116/214 (54%), Gaps = 2/214 (0%) Query: 9 AIFFDLDDTLYDHLIPFREAVREVLKPDESHLNYADLFYKVRHHSDLLWPKYXXXXXXXX 68 A+ FD+DDTLYD L PFR A +VL D ++ LF + RH+S+L++ + Sbjct: 3 ALLFDVDDTLYDQLEPFRLACGQVLGND-FRTDHERLFVRSRHYSELVFNQSESGRMSME 61 Query: 69 XXXXXXXXXAFAEYGLELSREQAAKVQAAYIGRQYSIEMIEGAAEQLQRFISLGHKVGII 128 AFA+ + L A ++Q AY Q I ++ G A L + G +G+I Sbjct: 62 DMYVYRLVHAFADLDICLKPRDALRLQEAYGMFQQRIGLLPGMAGILSEARAKGALLGLI 121 Query: 129 TNGPQDHQMSKLRGLGVDRLIPEEMIFISDAVGLAKPDPAIFAHVNRVTGTTAGQSLYVG 188 TNGP HQ K+R LG+++ I E+ +FIS +G+AKPD +F V G G + Y+G Sbjct: 122 TNGPSGHQRDKIRVLGLEQWIEEDHVFISAEMGVAKPDIRVFRKVQEALGLDVGHTYYIG 181 Query: 189 DTWDNDVVGALEAGWKVCWYNPRGRQ-PGTAHKP 221 D++ NDV+GA AGWK W+N R PG P Sbjct: 182 DSFANDVIGAKRAGWKAVWFNRRHHGVPGCEDDP 215 >A0AG88.1 A0AG88_LISW6 Complete genome Length = 234 Score = 138 bits (348), Expect = 4e-31, Method: Compositional matrix adjust. Identities = 77/229 (33%), Positives = 118/229 (51%), Gaps = 3/229 (1%) Query: 8 LAIFFDLDDTLYDHLIPFREAVREVLKPDESHLNYADLFYKVRHHSDLLWPKYXXXXXXX 67 + + FD+DDT+YD L PF EA + V + + HL +L+ K R +SD ++ + Sbjct: 2 INLIFDIDDTVYDQLKPFEEAFKTVFEKAD-HLKIENLYIKSRFYSDEVYHRVVRGEMPK 60 Query: 68 XXXXXXXXXXAFAEYGLELSREQAAKVQAAYIGRQYSIEMIEGAAEQLQRFISLGHKVGI 127 A ++ ++++++A Q AY Q IE+ G E L +GI Sbjct: 61 AEMHIYRITQALNDFDYQITKKEAEAFQQAYEQNQRKIELSSGIKEILTWAKKNDIMMGI 120 Query: 128 ITNGPQDHQMSKLRGLGVDRLIPEEMIFISDAVGLAKPDPAIFAHVNRVTGTTAGQSLYV 187 ITNGP++HQ K+ L ++ IP E FIS VG+ KPD IF V G + ++ Y+ Sbjct: 121 ITNGPKEHQQHKINDLQINDYIPAEHTFISGGVGIEKPDKKIFKLVEEQIGINSAETYYI 180 Query: 188 GDTWDNDVVGALEAGWKVCWYNPRGR-QP-GTAHKPSYIFASYREFSEL 234 GD+++NDV+G+ AGW W N RG +P A P Y + R+ L Sbjct: 181 GDSFENDVIGSKSAGWNAIWLNRRGHLEPEKAAFHPDYCVPNERKLFAL 229 >Q8Y997.1 Q8Y997_LISMO Lmo0635 protein Length = 234 Score = 137 bits (346), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 77/219 (35%), Positives = 115/219 (52%), Gaps = 5/219 (2%) Query: 8 LAIFFDLDDTLYDHLIPFREAVREVL-KPDESHLNYADLFYKVRHHSDLLWPKYXXXXXX 66 + + FD+DDT+YD L PF A + V K D HL +L+ K R +SD ++ + Sbjct: 2 INLIFDIDDTVYDQLKPFENAFKTVFGKAD--HLKIENLYIKSRFYSDEVYHRVVRGEMP 59 Query: 67 XXXXXXXXXXXAFAEYGLELSREQAAKVQAAYIGRQYSIEMIEGAAEQLQRFISLGHKVG 126 A +++ ++++++A Q AY Q IE+ G E L +G Sbjct: 60 KAEMHVYRITQALSDFDYQITKKEAETFQHAYEQNQRKIELSPGIKEILAWAKKNEITMG 119 Query: 127 IITNGPQDHQMSKLRGLGVDRLIPEEMIFISDAVGLAKPDPAIFAHVNRVTGTTAGQSLY 186 IITNGP++HQ K+ L ++ IP E FIS VG+ KPD IF V G + ++ Y Sbjct: 120 IITNGPKEHQQHKINDLQINDWIPAEHTFISGKVGIEKPDKKIFKLVEEQIGINSAETYY 179 Query: 187 VGDTWDNDVVGALEAGWKVCWYNPRG--RQPGTAHKPSY 223 +GD+++NDV+G+ AGWK W N RG R A +P Y Sbjct: 180 IGDSFENDVIGSKSAGWKSIWLNRRGHLRPTEAAFQPDY 218 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,367,915,618 Number of extensions: 52925757 Number of successful extensions: 117282 Number of sequences better than 1.0e-05: 931 Number of HSP's gapped: 116473 Number of HSP's successfully gapped: 931 Length of query: 237 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 105 Effective length of database: 1,817,122,223 Effective search space: 190797833415 Effective search space used: 190797833415 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 129 (54.3 bits)