BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0231.0011.p (1735 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q8R7J4.1 Q8R7J4_THETN S-layer homology domain protein 145 4e-32 A4J940.1 A4J940_DESRM Ig family protein 144 1e-31 B0K2B5.1 B0K2B5_THEPX Alpha amylase, catalytic region 137 1e-29 B7R658.1 B7R658_9THEO Bacterial Ig-like domain (Group 2) family ... 136 2e-29 Q8R714.1 Q8R714_THETN Subtilisin-like serine proteases 131 8e-28 >Q8R7J4.1 Q8R7J4_THETN S-layer homology domain protein Length = 1321 Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust. Identities = 117/393 (29%), Positives = 180/393 (45%), Gaps = 37/393 (9%) Query: 1353 KQIEASKKALAAVSE-QLTAKLGAGLASELKVSLTVEVPAMGDGVNKLNTSLPSEILKVL 1411 K IE++ KA+ V E +++ + E++ LT V L +P +L ++ Sbjct: 949 KVIESADKAVLVVDEIKVSKDIKDSTRKEVQFDLT---NISTKSVKAL--EIPVSVLNLI 1003 Query: 1412 QDN------KVDGLKLQMGTTGFTIEPDTFGTVEAGQKITLAAEVVENAVIGKPGQAEPL 1465 +N K D + L+ + + + + ITL E K + E Sbjct: 1004 AENQKDVIVKSDEIALKFESKVLAVSKEVLDLINKEGSITLTIE--------KKSKPEAN 1055 Query: 1466 ATLPV---MEFRATVGDKAVKHFEKPVNVTFDVSAINTSKYPAENLERLTVYVLNETSLT 1522 A PV + G+ +K E PV +TF+V A+++ ++ VY LNE + Sbjct: 1056 AYKPVSNAYDITIKAGESKIK-LESPVKLTFEVK-------DAKDIRKVGVYYLNEATGK 1107 Query: 1523 WEAVGGKYDPVTQTVSALRGHFSRYTVMIGSASFKDVADNHWAKKEINYLLTKGILEQTA 1582 WE VGGK D T TV+A HFS Y FKDV + WA IN L +K I++ Sbjct: 1108 WEYVGGKVDKNTNTVTAEVKHFSTYGAFEYDKQFKDVPKDFWAYDVINVLASKHIIKGMD 1167 Query: 1583 E--FNPSGKVTRAQFANWISRAYGLDGSGLTLPFSDVAAGSAGYNGVAAAYEAGIITGKS 1640 + F P+ K+TRA+FA + RA G+ F DV AG+ N + AAY AGI+ G Sbjct: 1168 DDNFAPNAKITRAEFAALMIRALGIPEEPYKGEFEDVKAGAWYANAIEAAYRAGIMMGDG 1227 Query: 1641 STVFDPEATISRQEIATMLARALTLYNGAKTVADPGAVNAAYTDGGKIAKWAAAGVALAN 1700 + P+ I+R+E+A ++ R G K + N + D I++WA VA A Sbjct: 1228 KKM-RPDDPITREEMAAVIMRVYAKMTGYK---EENIGNTVFKDNDSISEWARNVVANAA 1283 Query: 1701 RTDLFKGFEDGTFRPXXXXXXXXXXXLIYRLYQ 1733 + + KG+ED TFR L+YR+ + Sbjct: 1284 KLGIVKGYEDNTFRAKNNATRAEGVTLLYRILE 1316 >A4J940.1 A4J940_DESRM Ig family protein Length = 618 Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 90/275 (32%), Positives = 144/275 (52%), Gaps = 19/275 (6%) Query: 1470 VMEFRATV-----GDKAVKHFEKPVNVTFDVSAINTSKYPAENLERLTVYVLNETSLTWE 1524 V E A V K +K F + V+ V + AE RLTV NE + TW+ Sbjct: 349 VFELSACVVLKDGSQKNIKQFNGKIQVSLPVPQ-SARGQAAEG--RLTVGYYNEQTKTWQ 405 Query: 1525 AVGGKYDPVTQTVSALRGHFSRYTVM----IGSASFKDVADNHWAKKEINYLLTKGILEQ 1580 + G+Y+PVT T++ H S+Y V+ + + FKD+A NHWA+ +I ++ KG + Sbjct: 406 NIAGQYNPVTGTITFETNHLSKYAVIEVKQVQTTVFKDIA-NHWARADIEFMADKGFVGG 464 Query: 1581 TAEFN--PSGKVTRAQFANWISRAYGLDGSGLTLPFSDVAAGSAGYNGVAAAYEAGIITG 1638 P +TRAQFA ++ R + S L F+DV AG Y +AAAY+AG++ G Sbjct: 465 VGNGVFAPEANITRAQFAAFLVRILDVPQSNTALNFTDVKAGDWYYVPLAAAYQAGLVKG 524 Query: 1639 KSSTVFDPEATISRQEIATMLARALTLYNGAKTVADPGAVNAAYTDGGKIAKWAAAGVAL 1698 ++ P I+R+++A ML RA+ KT+ P ++ ++D G ++ WA AGV+ Sbjct: 525 VTADKIAPNENITREQMAVMLVRAME--EKGKTI--PSSLELTFSDKGMVSPWAVAGVSQ 580 Query: 1699 ANRTDLFKGFEDGTFRPXXXXXXXXXXXLIYRLYQ 1733 + + L G+ +GTF+P +++RLY+ Sbjct: 581 SAQLSLIGGYPNGTFQPRANATRAQAIVMLHRLYE 615 >B0K2B5.1 B0K2B5_THEPX Alpha amylase, catalytic region Length = 1847 Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 86/258 (33%), Positives = 133/258 (51%), Gaps = 14/258 (5%) Query: 1478 GDKAVKHFEKPVNVTFDVSAINTSKYPAENLERLTVYVLNETSLTWEAVGGKYDPVTQTV 1537 GD +K + PV +TF+V A+++ ++ VY LNE + WE VGGK D TV Sbjct: 1597 GDNKIK-IDSPVKLTFEVKD-------AKDIRKVGVYYLNEVTGKWEYVGGKVDRKANTV 1648 Query: 1538 SALRGHFSRYTVMIGSASFKDVADNHWAKKEINYLLTKGILEQTAE--FNPSGKVTRAQF 1595 + HFS Y + FKDV + WA IN L ++ I++ + F P+ K+TRAQF Sbjct: 1649 TIEAKHFSTYGAFEYNKEFKDVPKDFWAYDVINVLASRHIIKGMDDDNFAPNAKITRAQF 1708 Query: 1596 ANWISRAYGLDGSGLTLPFSDVAAGSAGYNGVAAAYEAGIITGKSSTVFDPEATISRQEI 1655 A + RA G++ F DV G+ N + AAY+ GI+ G + P+ I+R+E+ Sbjct: 1709 AALMIRALGIEEKPYKGEFEDVKEGAWYANAIEAAYQEGIMLGDGKKM-RPDDPITREEM 1767 Query: 1656 ATMLARALTLYNGAKTVADPGAVNAAYTDGGKIAKWAAAGVALANRTDLFKGFEDGTFRP 1715 A ++ R + G K + N + D KI++WA VA A + + KG+ED TF+P Sbjct: 1768 AAVIMRVYSKLTGYK---EENIGNTTFGDNNKISQWARNVVANAVKLGIVKGYEDNTFKP 1824 Query: 1716 XXXXXXXXXXXLIYRLYQ 1733 ++YR+ + Sbjct: 1825 KGNATKAEAAAMLYRILE 1842 >B7R658.1 B7R658_9THEO Bacterial Ig-like domain (Group 2) family protein Length = 1986 Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 115/416 (27%), Positives = 191/416 (45%), Gaps = 56/416 (13%) Query: 1330 ISKEHVTLEGNTVSSQLTEELVSKQI-EASKKALAAVSEQLTAKLGAGLASELKVSLTVE 1388 +S+ V +EGNT + E V+ +I +A+KK E+ LT Sbjct: 1610 VSQGKVVVEGNTTVLVVEENKVANEIKDATKK-------------------EVVFDLT-- 1648 Query: 1389 VPAMGDGVNKLNTSLPSEILKVLQDN------KVDGLKLQMGTTGFTIEPDTFGTVEAGQ 1442 +GD +K +P ++L ++ +N K + L + T+ +T ++ Sbjct: 1649 --NVGDTSSKA-IEVPVKVLNLIAENNKNIVVKSGEVALSIDVKAMTVSEETLNLIDKTG 1705 Query: 1443 KITLAAEVVENAVIGKPGQAEPLATLPV---MEFRATVGDKAVKHFEKPVNVTFDVSAIN 1499 + L VVE+ G+ + +PV + G+ +K + PV +TF+V Sbjct: 1706 SVKL---VVEDK-----GKKVANSLMPVSSAYDITIKAGENKIK-IDSPVKLTFEVKD-- 1754 Query: 1500 TSKYPAENLERLTVYVLNETSLTWEAVGGKYDPVTQTVSALRGHFSRYTVMIGSASFKDV 1559 A+++ ++ VY N+ + WE VGGK D T TV+ HFS Y FKDV Sbjct: 1755 -----AKDIRKVGVYYFNDETGKWEYVGGKVDRKTNTVTIEAKHFSTYGAFEYDKQFKDV 1809 Query: 1560 ADNHWAKKEINYLLTKGILEQTAE--FNPSGKVTRAQFANWISRAYGLDGSGLTLPFSDV 1617 + W IN L ++ I++ E F P+ K+TRA+FA + RA G+ F DV Sbjct: 1810 EKDFWGYDVINVLASRHIIKGMTEDTFAPNAKITRAEFAALMIRALGIPEEPYKGEFEDV 1869 Query: 1618 AAGSAGYNGVAAAYEAGIITGKSSTVFDPEATISRQEIATMLARALTLYNGAKTVADPGA 1677 G+ N + AAY AGI+ G + P+ I+R+E+A ++ R + G K + Sbjct: 1870 KEGAWYANAIEAAYRAGIMLGDGKKM-RPDDPITREEMAAVIMRVYSKLAGYK---EENI 1925 Query: 1678 VNAAYTDGGKIAKWAAAGVALANRTDLFKGFEDGTFRPXXXXXXXXXXXLIYRLYQ 1733 N + D KI++WA VA A + + +G+ED TF+P ++YR+ + Sbjct: 1926 GNTTFADNNKISEWARNVVANAAKLGIVRGYEDNTFKPKDNATRAEAAAMLYRILE 1981 >Q8R714.1 Q8R714_THETN Subtilisin-like serine proteases Length = 1999 Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust. Identities = 109/409 (26%), Positives = 187/409 (45%), Gaps = 44/409 (10%) Query: 1331 SKEHVTLEGNTVSSQLTEELVSKQI-EASKKALAAVSEQLTAKLGAGLASELKVSLTVEV 1389 S+ V +EGNT + E V+ +I +A+KK E+ LT Sbjct: 1624 SQGKVVVEGNTTVLVVEENKVANEIKDATKK-------------------EVVFDLT--- 1661 Query: 1390 PAMGDGVNKLNTSLPSEILKVLQDNKVDGLKLQMGTTGFTIEPDTFGTVEAGQKITLAAE 1449 +GD +K +P ++L ++ +N + ++ G +I+P E + Sbjct: 1662 -NVGDTSSKA-IEVPVKVLNMIAENN-KNVVVKSGEVALSIDPKAMTVSEETLNLINKTG 1718 Query: 1450 VVENAVIGKPGQAEPLATLPV---MEFRATVGDKAVKHFEKPVNVTFDVSAINTSKYPAE 1506 V+ V+ G+ + +PV + G+ +K + PV +TF+V + + Sbjct: 1719 SVK-LVVEDKGKKVANSLIPVSNAYDITIKTGENKIK-LDSPVKLTFEVKDV-------K 1769 Query: 1507 NLERLTVYVLNETSLTWEAVGGKYDPVTQTVSALRGHFSRYTVMIGSASFKDVADNHWAK 1566 ++ ++ +Y LNE + WE VGGK D T++ HFS Y FKDV + W Sbjct: 1770 DIRKVGIYYLNEVTGKWEYVGGKIDKNANTITFEAKHFSTYGAFEYDKQFKDVEKDFWGY 1829 Query: 1567 KEINYLLTKGILEQTAE--FNPSGKVTRAQFANWISRAYGLDGSGLTLPFSDVAAGSAGY 1624 IN L ++ I++ E F P+ K+TRA+FA + RA G+ F DV G Sbjct: 1830 DVINVLASRHIIKGMTEDTFAPNAKITRAEFAALMIRALGIPEEPYKGEFEDVKEGMWYA 1889 Query: 1625 NGVAAAYEAGIITGKSSTVFDPEATISRQEIATMLARALTLYNGAKTVADPGAVNAAYTD 1684 N + AAY+ GI+ G + P+ I+R+E+A ++ R + G K + N + D Sbjct: 1890 NAIEAAYQEGIMLGDGKKM-RPDDPITREEMAAVIMRVYSKLAGYK---EENIGNTTFAD 1945 Query: 1685 GGKIAKWAAAGVALANRTDLFKGFEDGTFRPXXXXXXXXXXXLIYRLYQ 1733 KI++WA VA A + + +G++D TF+P ++YR+ + Sbjct: 1946 NNKISEWARNVVANAVKLGIVRGYDDNTFKPKDNATRAEAAAMLYRILE 1994 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.312 0.130 0.357 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 9,309,391,599 Number of extensions: 390082192 Number of successful extensions: 820218 Number of sequences better than 1.0e-05: 642 Number of HSP's gapped: 820104 Number of HSP's successfully gapped: 667 Length of query: 1735 Length of database: 3,060,696,203 Length adjustment: 150 Effective length of query: 1585 Effective length of database: 1,647,543,953 Effective search space: 2611357165505 Effective search space used: 2611357165505 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 139 (58.2 bits)