BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0229.0012.p (288 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A5KMY9.1 A5KMY9_9FIRM Putative uncharacterized protein 357 8e-97 Q97DH9.1 Q97DH9_CLOAB Sugar kinase, ribokinase family 342 3e-92 A8RGV5.1 A8RGV5_9CLOT Putative uncharacterized protein 332 3e-89 A6M2S5.1 A6M2S5_CLOB8 PfkB domain protein 267 9e-70 A9MLL0.1 A9MLL0_SALAR Putative uncharacterized protein 254 7e-66 >A5KMY9.1 A5KMY9_9FIRM Putative uncharacterized protein Length = 304 Score = 357 bits (915), Expect = 8e-97, Method: Compositional matrix adjust. Identities = 164/290 (56%), Positives = 226/290 (77%), Gaps = 2/290 (0%) Query: 1 MKQYKVIGIGDNVVDKYVHQGIMYPGGNALNFSVYATMCGMESAYLGKFGSDEVAGYIRQ 60 M+ K+I +GDNV DKY+ +G MYPGG +N VY M MESAYLGK+G DEVA ++ Sbjct: 10 MEHCKIIAVGDNVCDKYLSRGKMYPGGQCVNTCVYVKMNNMESAYLGKYGDDEVAACVQD 69 Query: 61 VIDELNIDRSCCREYEGENGYARVTLEDGDRVFLGSNKGGIAKEHAWQFTKKDLDYIKQF 120 + E+ ID S CR YEGENG+A VTL++ DRVFLGSNKGGIAKEH + FTK+DL+YIK F Sbjct: 70 TLKEIGIDDSHCRRYEGENGFALVTLKETDRVFLGSNKGGIAKEHDFGFTKEDLEYIKGF 129 Query: 121 AVIHTSLNSYIEQDLTVLRESGVPISYDFSVRWNDGYLEQVCPNVDISFLSCSHLTAEER 180 +I+T+LNSYIE++L VL ++GVP++YDFS RW D YL+++CP V ++ +SC+HLT EER Sbjct: 130 HLIYTNLNSYIEKELPVLYQTGVPVAYDFSTRWTDEYLKEICPYVTVAIMSCAHLTDEER 189 Query: 181 EREMRKAQRFGAKIVVGTVGENGSYALFSDQWIYHPAV-STEAVDTMGAGDSYITAFLVE 239 E+EMRKAQ +G K+V+GT+GE+GSY L++D+ +Y PAV + + +DTMGAGDSY +AFL Sbjct: 190 EKEMRKAQSYGVKVVLGTIGEDGSYVLYNDKILYAPAVHADDVIDTMGAGDSYFSAFLCS 249 Query: 240 LIRNS-DGRIEFGQESEMLGKIKSSMSKGAEFAAEICRVNGAFGFGTPLV 288 L+ S +G+I G + EM +++++M KGA FAA++C + GAFG+G P++ Sbjct: 250 LLETSKEGKIVEGTDEEMAKRLQTAMGKGAVFAAKVCALEGAFGYGVPIL 299 >Q97DH9.1 Q97DH9_CLOAB Sugar kinase, ribokinase family Length = 295 Score = 342 bits (876), Expect = 3e-92, Method: Compositional matrix adjust. Identities = 157/289 (54%), Positives = 218/289 (75%), Gaps = 2/289 (0%) Query: 1 MKQYKVIGIGDNVVDKYVHQGIMYPGGNALNFSVYATMCGMESAYLGKFGSDEVAGYIRQ 60 MK YK++ IGDNV DKY+ +G MYPGG +N VY M G E+AY+GK+G+DEVA ++ Sbjct: 1 MKNYKIVAIGDNVCDKYLSRGKMYPGGQCINTCVYGKMNGAETAYIGKYGNDEVAECVQN 60 Query: 61 VIDELNIDRSCCREYEGENGYARVTLEDGDRVFLGSNKGGIAKEHAWQFTKKDLDYIKQF 120 + E+ ID S CR YEGENG+A VTL++ DRVFLGSNKGGIAKEH++ F + D +YIK+F Sbjct: 61 TLKEIGIDDSHCRHYEGENGFALVTLKNADRVFLGSNKGGIAKEHSYNFDENDFEYIKKF 120 Query: 121 AVIHTSLNSYIEQDLTVLRESGVPISYDFSVRWNDGYLEQVCPNVDISFLSCSHLTAEER 180 +I+T+LNSYIE +L L +GVPI+YDFS+RW D YL +VCP +D++ LSC+HLTAEER Sbjct: 121 DLIYTNLNSYIEDNLKELHATGVPIAYDFSMRWTDEYLLKVCPYIDVAILSCAHLTAEER 180 Query: 181 EREMRKAQRFGAKIVVGTVGENGSYALFSDQWIYHPAV-STEAVDTMGAGDSYITAFLVE 239 E+EM+K Q +G KIV+GT+GE+GSY L++ ++Y A+ + +DTMGAGDSY + FL Sbjct: 181 EKEMKKVQNYGVKIVLGTIGEDGSYVLYNGDFLYTSAIMAANIIDTMGAGDSYFSTFLCS 240 Query: 240 LIRNSD-GRIEFGQESEMLGKIKSSMSKGAEFAAEICRVNGAFGFGTPL 287 L++ S+ G++ G + M +++S+M GA FAA +C + GAFG+G P+ Sbjct: 241 LLQTSETGKLVEGTKESMKIRLESAMKSGAIFAANVCGMEGAFGYGVPI 289 >A8RGV5.1 A8RGV5_9CLOT Putative uncharacterized protein Length = 295 Score = 332 bits (850), Expect = 3e-89, Method: Compositional matrix adjust. Identities = 155/290 (53%), Positives = 212/290 (73%), Gaps = 2/290 (0%) Query: 1 MKQYKVIGIGDNVVDKYVHQGIMYPGGNALNFSVYATMCGMESAYLGKFGSDEVAGYIRQ 60 MK YK+I +GDNV DKY+ +G MYPGG +N VYA + G +AYLGK+G+D+VA +R Sbjct: 1 MKDYKIIAVGDNVCDKYLSRGRMYPGGQCVNTCVYAKLNGAYTAYLGKYGTDQVAECVRD 60 Query: 61 VIDELNIDRSCCREYEGENGYARVTLEDGDRVFLGSNKGGIAKEHAWQFTKKDLDYIKQF 120 + ++ ID S R +EGENG+A VTL+ DRVFLGSNKGG+A+E+ + FT++D YI QF Sbjct: 61 TLKQIGIDDSHSRCHEGENGFALVTLKGNDRVFLGSNKGGVAREYGYDFTEEDFAYISQF 120 Query: 121 AVIHTSLNSYIEQDLTVLRESGVPISYDFSVRWNDGYLEQVCPNVDISFLSCSHLTAEER 180 +I+T+LNSYIE DL L+E+GV I+YDFS RW D YLE+VCP V ++ LSC+HLT +ER Sbjct: 121 NLIYTNLNSYIEDDLKSLKETGVAIAYDFSTRWTDAYLEKVCPYVTVAILSCAHLTRQER 180 Query: 181 EREMRKAQRFGAKIVVGTVGENGSYALFSDQWIYHPAV-STEAVDTMGAGDSYITAFLVE 239 E EM+K Q +G K+V+GT+GE+GSY L+ D ++Y PAV + + +DTMGAGDSY AFL Sbjct: 181 ETEMKKVQSYGVKVVLGTIGEDGSYVLYDDSFLYAPAVHADDVIDTMGAGDSYFAAFLCS 240 Query: 240 LIRNSD-GRIEFGQESEMLGKIKSSMSKGAEFAAEICRVNGAFGFGTPLV 288 L+ S G + G E M ++ +M +GA FAA++C GAFG+G P++ Sbjct: 241 LLETSQTGAVVEGTEERMKERLVEAMERGAAFAAKMCAKEGAFGYGVPVL 290 >A6M2S5.1 A6M2S5_CLOB8 PfkB domain protein Length = 280 Score = 267 bits (682), Expect = 9e-70, Method: Compositional matrix adjust. Identities = 138/282 (48%), Positives = 185/282 (65%), Gaps = 9/282 (3%) Query: 5 KVIGIGDNVVDKYVHQGIMYPGGNALNFSVYATMCGMESAYLGKFGSDEVAGYIRQVIDE 64 KVIG+GDNVVDKY H MYPGGNALNF+ YA G+ SA+LG FGSD A +++ I E Sbjct: 3 KVIGLGDNVVDKYEHIRTMYPGGNALNFAAYAKKIGINSAFLGAFGSDAEADHVQNTIHE 62 Query: 65 LNIDRSCCREYEGENGYARVTLEDGDRVFLGSNKGGIAKEHAWQFTKKDLDYIKQFAVIH 124 L +D S CR + GENG ARVTLEDGDRVFLGSN+GG+ +E+ T+ DL+YIK F ++H Sbjct: 63 LGLDISKCRHFNGENGCARVTLEDGDRVFLGSNEGGVLRENGLNLTQDDLEYIKTFDLLH 122 Query: 125 TSLNSYIEQDLTVLRESGVPISYDFSVRWNDGYLEQVCPNVDISFLSCSHLTAEEREREM 184 L Y E +L +R +PIS+DFS + +E++ P VD SF SCSHL +E + Sbjct: 123 AGLYGYTEPELDKIRALSIPISFDFSDDFTIEEVERIAPKVDFSFFSCSHLKTDEMLNLV 182 Query: 185 RKAQRFGAKIVVGTVGENGSYALFSDQWIYHPAVSTEAVDTMGAGDSYITAFLVELIRNS 244 KA + G++IVV T+GE G+ ++ EAVDTMGAGDS+ITAFL+ I Sbjct: 183 MKAHKLGSEIVVVTMGEKGALLYDGTKFYSQEPELVEAVDTMGAGDSFITAFLINYISKI 242 Query: 245 DGRIEFGQESEMLGK--IKSSMSKGAEFAAEICRVNGAFGFG 284 +E+E+ + IK S+++GA F+A+ C V G+FG+G Sbjct: 243 -------KENELYRENIIKESLNEGAIFSAKTCLVEGSFGYG 277 >A9MLL0.1 A9MLL0_SALAR Putative uncharacterized protein Length = 281 Score = 254 bits (649), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 123/282 (43%), Positives = 184/282 (65%), Gaps = 7/282 (2%) Query: 6 VIGIGDNVVDKYVHQGIMYPGGNALNFSVYATMCGMESAYLGKFGSDEVAGYIRQVIDEL 65 V+GIGDNVVDKY+H GIMYPGGNALNFSVYA + + SA++G FG+D+ A +++ V+ +L Sbjct: 5 VLGIGDNVVDKYLHSGIMYPGGNALNFSVYAKLADIPSAFMGAFGNDDAARHVQDVLRQL 64 Query: 66 NIDRSCCREYEGENGYARVTLEDGDRVFLGSNKGGIAKEHAWQFTKKDLDYIKQFAVIHT 125 ID S CR Y GENGYA + L GDR F+ SNK G+ +EH + + DL YI QF ++H+ Sbjct: 65 QIDISHCRHYTGENGYACIRLTHGDRQFVASNKNGVLREHPFSLSDVDLRYISQFTLVHS 124 Query: 126 SLNSYIEQDLTVLRESGVPISYDFSVRWNDGYLEQVCPNVDISFLSCSHLTAEEREREMR 185 S+N ++E +L +++ V +S+DFS R D Y E+VCP VD F+SCS L+ +E + ++ Sbjct: 125 SINGHLESELEKIKQQTVLLSFDFSGRGTDEYFEKVCPWVDYGFISCSGLSPDEIKIKLN 184 Query: 186 KAQRFGAKIVVGTVGENGSYALFSDQWIYHPAVSTEAVDTMGAGDSYITAFLVELIRNSD 245 K R+G + ++ T G Y ++ V E +DT+GAGD+++T FL+ ++++ Sbjct: 185 KLYRYGCRHIIATCGHEKVYYFSGADYLEWQPVYIEPIDTLGAGDAFLTGFLLSILQS-- 242 Query: 246 GRIEFGQESEMLGKIKSSMSKGAEFAAEICRVNGAFGFGTPL 287 G E +ES + +M +G + AA++ GAFGFG P Sbjct: 243 GMAEPDKES-----VLRAMRQGGKSAAQVLSHYGAFGFGKPF 279 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,806,367,459 Number of extensions: 77201894 Number of successful extensions: 189871 Number of sequences better than 1.0e-05: 300 Number of HSP's gapped: 189782 Number of HSP's successfully gapped: 300 Length of query: 288 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 154 Effective length of database: 1,798,280,193 Effective search space: 276935149722 Effective search space used: 276935149722 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)