BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0226.0002.p
         (157 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K3E7.1 B3K3E7_9BACI Putative uncharacterized protein                131   2e-29
A3I9T0.1 A3I9T0_9BACI Putative uncharacterized protein                108   2e-22
B3ZXK4.1 B3ZXK4_BACCE Putative uncharacterized protein                 80   6e-14
B1HYH1.1 B1HYH1_LYSSC Putative uncharacterized protein                 79   1e-13
A9KJA0.1 A9KJA0_CLOPH Putative uncharacterized protein                 75   2e-12

>B3K3E7.1 B3K3E7_9BACI Putative uncharacterized protein
          Length = 148

 Score =  131 bits (330), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 69/133 (51%), Positives = 92/133 (69%), Gaps = 7/133 (5%)

Query: 21  PLQSNAEAS-YRVPQEDSEELRLQDMLLNFLTPYINDAVRDYYRRLLVEPPLVYPYFVNV 79
           PL S+AE + Y  P++DS +L+ QD+L+ FL P+I++ V  +Y   L E P+VYPYFV+V
Sbjct: 19  PLPSHAEVTDYTSPKKDSAQLQYQDLLMLFLLPHIDEVVNRHYSHTLKELPVVYPYFVDV 78

Query: 80  VDSMRINEFRGFXXXXLSITLDVTPVVGPHISVGEDRLTFQIS---VGPEVKLVNYIHLK 136
           +   R+N FRGF      ITL+  PVVGPHI VG+DRL F+++    G  VKLV Y HL 
Sbjct: 79  IQVKRVNGFRGF---HFVITLEARPVVGPHIPVGKDRLVFEVAPTIPGGMVKLVEYKHLN 135

Query: 137 SYELPPHWQNIVK 149
           +YELP HWQ+IVK
Sbjct: 136 TYELPSHWQDIVK 148


>A3I9T0.1 A3I9T0_9BACI Putative uncharacterized protein
          Length = 152

 Score =  108 bits (269), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 78/111 (70%), Gaps = 6/111 (5%)

Query: 35  EDSEELRLQDMLLNFLTPYI-NDAVRDYYRRLLVE-PPLVYPYFVNVVDSMRINEFRGFX 92
           EDSEELRLQDML+N L PYI  D    YY ++  E  P V P+ ++V+++ R+N FRGF 
Sbjct: 44  EDSEELRLQDMLMNMLAPYIEKDLTNFYYPKISKEFSPHVTPWKIDVIETRRVNGFRGFI 103

Query: 93  XXXLSITLDVTPVVGPH-ISVGEDRLTFQISVGPEVKLVNYIHLKSYELPP 142
              L IT ++ P  G H I +G+DR+T++IS GPE+KL+++ HLK+Y LPP
Sbjct: 104 ---LEITFEIEPTDGGHNIPIGKDRMTYEISSGPEIKLIHHTHLKTYTLPP 151


>B3ZXK4.1 B3ZXK4_BACCE Putative uncharacterized protein
          Length = 140

 Score = 80.1 bits (196), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 46/113 (40%), Positives = 64/113 (56%), Gaps = 5/113 (4%)

Query: 28  ASYRVPQEDSEELRLQDMLLNFLTPYINDAVRDYYRRLLVEPPLVYPYFVNVVDSMRINE 87
           A Y  P+ED+ EL+ QDM L F    +   V  YY +   +   +YPY V+ +   RIN 
Sbjct: 25  AQYPQPEEDTVELKFQDMFLVFFNDILEKDVNKYYSKYTDKRVSIYPYQVSFLKVSRING 84

Query: 88  FRGFXXXXLSITLDVTPVVGPHISVGEDRLTFQISVGPE--VKLVNYIHLKSY 138
           FRG+      + ++VTPV+GPH  VG +RL +QIS   E   KL+ Y HLK +
Sbjct: 85  FRGY---DFIVEVEVTPVIGPHNIVGIERLKYQISFNLEKKAKLIEYRHLKMF 134


>B1HYH1.1 B1HYH1_LYSSC Putative uncharacterized protein
          Length = 98

 Score = 79.3 bits (194), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 65/100 (65%), Gaps = 5/100 (5%)

Query: 45  MLLNFLTPYINDAVRDYYRRLLVE--PPLVYPYFVNVVDSMRINEFRGFXXXXLSITLDV 102
           ML+  LTPYI   + +YY   +++     V P+ + ++ + R+N+FRGF    L IT ++
Sbjct: 1   MLMLMLTPYIEKDLTNYYYPKILKDFSSQVTPWKIEIIKTRRVNDFRGFI---LQITFEI 57

Query: 103 TPVVGPHISVGEDRLTFQISVGPEVKLVNYIHLKSYELPP 142
            P    +  VG+DR+T++I+ GPEVKL+N+ HLK+Y+ PP
Sbjct: 58  EPTGIQYNPVGKDRMTYEITYGPEVKLINHTHLKTYKYPP 97


>A9KJA0.1 A9KJA0_CLOPH Putative uncharacterized protein
          Length = 121

 Score = 75.1 bits (183), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 68/116 (58%), Gaps = 3/116 (2%)

Query: 32  VPQEDSEELRLQDMLLNFLTPYINDAVRDYYRRLLVEPPLVYPYFVNVVDSMRINEFRGF 91
           + +E+S+++  QD+++  L P I+ AV DYY+ +L E P    Y    +  ++I    G 
Sbjct: 6   IDEEESQDILYQDVIITALAPTIDTAVADYYKNILSETPF---YDSTSIKILKIERPNGN 62

Query: 92  XXXXLSITLDVTPVVGPHISVGEDRLTFQISVGPEVKLVNYIHLKSYELPPHWQNI 147
                 I ++V P +GPHI+VG+DR++ +++     KL+ + H+K Y LP  ++++
Sbjct: 63  RTSHFIIDIEVKPFIGPHITVGKDRISIELTYPESPKLLKFKHIKDYPLPERYKDL 118


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.322    0.140    0.411 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 824,432,735
Number of extensions: 30211020
Number of successful extensions: 54646
Number of sequences better than 1.0e-05: 5
Number of HSP's gapped: 54637
Number of HSP's successfully gapped: 5
Length of query: 157
Length of database: 3,060,696,203
Length adjustment: 118
Effective length of query: 39
Effective length of database: 1,949,016,433
Effective search space: 76011640887
Effective search space used: 76011640887
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)