BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0220.0002.p (344 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A9KP01.1 A9KP01_CLOPH Glycosyl transferase group 1 362 3e-98 A9KP03.1 A9KP03_CLOPH Glycosyl transferase group 1 311 5e-83 B1D509.1 B1D509_9BACL Glycosyl transferase group 1 261 5e-68 A0ZGR2.1 A0ZGR2_NODSP Glycosyl transferase, group 1 187 2e-45 C4E6I7.1 C4E6I7_STRRS Glycosyltransferase 183 2e-44 >A9KP01.1 A9KP01_CLOPH Glycosyl transferase group 1 Length = 854 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 174/324 (53%), Positives = 226/324 (69%), Gaps = 6/324 (1%) Query: 11 RKLTIAQVISNYPNAQPVPSIK-GGTEKIVYELTEELVRRGHKVYLFAALGSRSRAKLIT 69 R LTI QV P+ PVP GG E ++YE+TEELVRRGHKVYL+A GS++ A LI Sbjct: 197 RILTIVQVA---PDVYPVPPTNYGGIEVVIYEITEELVRRGHKVYLYAPEGSKTSATLIP 253 Query: 70 YPKGLRHE--SIARFVLKKLPERVDIIHDHTFRSALGVTNPKVPTVCTVHIPVKRRIKYP 127 Y + + IA +VL +PE VDIIHDHT S LG N +PT+CT+H + R+ YP Sbjct: 254 YQHSGKGDFNQIAEYVLGTMPEGVDIIHDHTHISVLGKKNLNIPTICTIHGTINYRVNYP 313 Query: 128 VYVSKRARRLMGNNKGFCVYNGINTREYEFSTEKHLYLLYIGRIIRNKGVMQAIQVAEKT 187 V+VS+RA ++G GF VYNG+N EYE+S EK Y+LY+GR+ + KG+ A+ +A+ T Sbjct: 314 VFVSQRALNVIGGGHGFYVYNGLNLEEYEYSEEKDDYMLYLGRLDKMKGLGHALDIADLT 373 Query: 188 GKRLIIAGPVKASRFFEREVKPRIRNNPNIQYVGPVGGKMKQQLLKHAECVLFPTLWEEP 247 KRL+IAGPV +F E++PRIR NP IQY+G +GGK KQ++LK A C+LFPT WEEP Sbjct: 374 NKRLVIAGPVHDLAYFNNEIEPRIRKNPKIQYIGSIGGKEKQEILKKACCLLFPTSWEEP 433 Query: 248 FGLVLIESLGCGTPVLALRNGAVPEILSGFPNLICNNISEMAVKVRQKRYPSPHLLRAYV 307 FGLV+IE++ CGTPV+AL NGAVPE+L GFP ICN++ EMA KV Y P+ LR Y Sbjct: 434 FGLVMIEAMACGTPVIALGNGAVPEVLKGFPECICNSVDEMADKVMGGNYSKPNELREYA 493 Query: 308 QKHFTNKQMTDSYLRIYHEVIQRE 331 KHFT ++M D YL +Y +VI + Sbjct: 494 IKHFTTEKMVDGYLEVYEKVISEQ 517 Score = 336 bits (862), Expect = 2e-90, Method: Compositional matrix adjust. Identities = 165/325 (50%), Positives = 228/325 (70%), Gaps = 4/325 (1%) Query: 10 SRKLTIAQVISNYPNAQPVPSIK-GGTEKIVYELTEELVRRGHKVYLFAALGSRSRAKLI 68 S+K T+ ++I P+A PVP GG E+++Y+LTEELV+RGH+V+LFAA GS S A +I Sbjct: 529 SKKDTL-KIIQIAPDAFPVPPKDYGGIERVIYDLTEELVKRGHEVFLFAAEGSISSANII 587 Query: 69 TYP-KGLRHESIARFVLKKLPE-RVDIIHDHTFRSALGVTNPKVPTVCTVHIPVKRRIKY 126 Y KG E IA FV K LP DIIHDHT S L + +P + T+H K K Sbjct: 588 PYTHKGPDSEKIADFVKKTLPSIGADIIHDHTHASVLSRCDLSIPIISTIHDSRKNSAKN 647 Query: 127 PVYVSKRARRLMGNNKGFCVYNGINTREYEFSTEKHLYLLYIGRIIRNKGVMQAIQVAEK 186 P+Y+ ++A R G N+G+ VYNGIN +YEFS K YL+++G + +KG+ A+ VAE+ Sbjct: 648 PIYLCQKALRNAGLNQGYSVYNGINPEDYEFSESKEDYLIFLGILYSHKGINYALDVAER 707 Query: 187 TGKRLIIAGPVKASRFFEREVKPRIRNNPNIQYVGPVGGKMKQQLLKHAECVLFPTLWEE 246 TG RLIIAGP+ ++++ ++PRI+ N NI YVG VGGK +Q LLKHA+C+LFPT+WEE Sbjct: 708 TGMRLIIAGPLYDIEYYKKAIEPRIKANTNISYVGSVGGKERQNLLKHAKCMLFPTVWEE 767 Query: 247 PFGLVLIESLGCGTPVLALRNGAVPEILSGFPNLICNNISEMAVKVRQKRYPSPHLLRAY 306 PFGLV++E++ CGTPVLA NGAVPE+L GFP LIC+N+ EM KV+ +P +LR Y Sbjct: 768 PFGLVMVEAMACGTPVLAFGNGAVPEVLKGFPELICSNVDEMIYKVQNMEFPKAKVLRTY 827 Query: 307 VQKHFTNKQMTDSYLRIYHEVIQRE 331 V+ +F+ +MT++Y+ IY +VI+ E Sbjct: 828 VENNFSAVKMTENYINIYRKVIEEE 852 >A9KP03.1 A9KP03_CLOPH Glycosyl transferase group 1 Length = 324 Score = 311 bits (798), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 147/318 (46%), Positives = 210/318 (66%), Gaps = 3/318 (0%) Query: 17 QVISNYPNAQPVPSIK-GGTEKIVYELTEELVRRGHKVYLFAALGSRSRAKLITY--PKG 73 +++ P+ P+P + GG E+++Y+L EELVRRGH+V+L+A GS + A+LI Y K Sbjct: 2 KIVQVAPDVYPIPPVNYGGIERVMYDLIEELVRRGHEVFLYAPKGSNTSARLIPYQHEKS 61 Query: 74 LRHESIARFVLKKLPERVDIIHDHTFRSALGVTNPKVPTVCTVHIPVKRRIKYPVYVSKR 133 I ++V LPE +DIIHDHT S +G VPTVCT H +KYPVY S+ Sbjct: 62 WSQHEILKYVSATLPEDIDIIHDHTHASIIGRVGLPVPTVCTEHFSANCPVKYPVYASRT 121 Query: 134 ARRLMGNNKGFCVYNGINTREYEFSTEKHLYLLYIGRIIRNKGVMQAIQVAEKTGKRLII 193 + G N+GF +++GI ++EF K YL YIG++ +KG AI+V+E+T K LI+ Sbjct: 122 VQERYGGNQGFFIHHGIRLEDFEFKESKEDYLFYIGKLDESKGPQFAIKVSERTNKMLIL 181 Query: 194 AGPVKASRFFEREVKPRIRNNPNIQYVGPVGGKMKQQLLKHAECVLFPTLWEEPFGLVLI 253 AGP+ + +F++ + P I+ NPNI ++G VGG+ KQ LLK+A CVLFPTL +E FGLV I Sbjct: 182 AGPIHDTAYFDKAIAPVIKANPNIIFIGEVGGRRKQDLLKNAACVLFPTLCQESFGLVAI 241 Query: 254 ESLGCGTPVLALRNGAVPEILSGFPNLICNNISEMAVKVRQKRYPSPHLLRAYVQKHFTN 313 E++ CGTPVL+ +GAVPE+L G P+ IC N+ EM KV YP P LLR YV+ +F+ Sbjct: 242 EAMACGTPVLSFPSGAVPEVLQGVPDFICTNVDEMVQKVLSGDYPKPQLLRDYVKNNFSI 301 Query: 314 KQMTDSYLRIYHEVIQRE 331 + M D Y+++Y +V+ E Sbjct: 302 ELMADRYIKVYMQVLALE 319 >B1D509.1 B1D509_9BACL Glycosyl transferase group 1 Length = 342 Score = 261 bits (668), Expect = 5e-68, Method: Compositional matrix adjust. Identities = 142/321 (44%), Positives = 196/321 (61%), Gaps = 11/321 (3%) Query: 13 LTIAQVISNYPNAQPVPSIK-GGTEKIVYELTEELVRRGHKVYLFAALGSRSRAKLITYP 71 + IAQ+ +N PVP GGT++ V+ LTEELV RGH+V+LFA GS S A Sbjct: 1 MRIAQISTN---TIPVPPKDYGGTQRDVHYLTEELVNRGHEVFLFAKKGSTSNATQTFEY 57 Query: 72 KGLRHESIARFVLKKLPERVDIIHDHTFRSALGVTNPKVPTVCTVHIP-VKRRIKYPVYV 130 + + F++K LP VDIIHDH + NP +PT+ H +K ++ VYV Sbjct: 58 ESDDPKKQLDFIIKNLPPDVDIIHDHY--GIVAKANPPIPTISNSHSKGIKGDVQLRVYV 115 Query: 131 SKRARRLMGNNKGFCVYNGINTREYEFSTEKHLYLLYIGRIIRNKGVMQAIQVAEKTGKR 190 SK R G KG+ V+NGI +Y ++ +K YLL++GR+I+ KGV AI+VA+KTG R Sbjct: 116 SKFILRKYGKRKGYAVHNGIRMEDYTYTKDKQNYLLFMGRLIKEKGVHLAIKVAKKTGMR 175 Query: 191 LIIAGPVKASRFFEREVKPRIRNNPNIQYVGPVGGKMKQQLLKHAECVLFPTLWEEPFGL 250 LIIAG + +F ++KP + I Y+GPVGG K++LL +A CVLF + W+EPFGL Sbjct: 176 LIIAGTLNDKAYFNAKIKPHL--GSKISYIGPVGGDRKRELLANASCVLFTSTWDEPFGL 233 Query: 251 VLIESLGCGTPVLALRNGAVPEILSGFPNLICNNISEMAVKV--RQKRYPSPHLLRAYVQ 308 VLIESL GTPVL G V E+L G P L+C SEMA+K+ R+KR P R Y + Sbjct: 234 VLIESLASGTPVLGFNKGGVAEVLKGMPQLLCKTTSEMAMKIKYRKKRLPKASECRRYAR 293 Query: 309 KHFTNKQMTDSYLRIYHEVIQ 329 +++ MTD +L +Y ++I Sbjct: 294 SRYSDLIMTDRFLSLYEKIID 314 >A0ZGR2.1 A0ZGR2_NODSP Glycosyl transferase, group 1 Length = 362 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 122/332 (36%), Positives = 179/332 (53%), Gaps = 28/332 (8%) Query: 29 PSIKGGTEKIVYELTEELVRRGHKVYLFAALGSRSRAKLIT-YPKGLR----------HE 77 P GG E +V LT+ELVRRGH+V LFA+ S S AKL++ +P+ LR +E Sbjct: 15 PPAYGGIELVVGLLTDELVRRGHEVTLFASGDSISLAKLVSVHPRALRLDPDVKEHNIYE 74 Query: 78 SIARFVLKKLPERVDIIHDHTFRSALGVTN-PKVPTVCTVH---IPVKRRI-KYP----- 127 + + + E DIIH H AL N K PTV T+H P +I +Y Sbjct: 75 MLQLGFVYERAEEFDIIHSHVCCPALPYANLTKTPTVHTLHGVFTPDNEKIFQYAKHQPF 134 Query: 128 VYVSKRARRL-MGNNKGFCVYNGINTREYEF--STEKHLYLLYIGRIIRNKGVMQAIQVA 184 V +S R L +G N VYNGI+ Y+F + YL ++GRI KG AI +A Sbjct: 135 VSISNAQRELRLGLNYVATVYNGIDVDSYKFHPQPDNPPYLAFLGRISPEKGTHLAIAIA 194 Query: 185 EKTGKRLIIAGPVKA--SRFFEREVKPRIRNNPNIQYVGPVGGKMKQQLLKHAECVLFPT 242 ++TG L IAG V + +FE++VKP+I + I+Y+G K L+ A LFP Sbjct: 195 KQTGYHLKIAGKVDVVDTEYFEQQVKPQI-DGQQIEYLGEANHVQKNALMGGAIATLFPI 253 Query: 243 LWEEPFGLVLIESLGCGTPVLALRNGAVPEILS-GFPNLICNNISEMAVKVRQKRYPSPH 301 W EPFGLV++ES+ GTPV+A++ G+ E++ G +CNN+++ + Q Sbjct: 254 TWREPFGLVMVESMAAGTPVIAMKLGSTVEVIKHGKTGFLCNNVADFVTAIDQVSQLDRD 313 Query: 302 LLRAYVQKHFTNKQMTDSYLRIYHEVIQRESG 333 + R YV+ HF+ + MTD Y +Y +++ +S Sbjct: 314 VCREYVKNHFSLQHMTDGYEAVYQQILTAQSA 345 >C4E6I7.1 C4E6I7_STRRS Glycosyltransferase Length = 355 Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 112/329 (34%), Positives = 170/329 (51%), Gaps = 33/329 (10%) Query: 29 PSIKGGTEKIVYELTEELVRRGHKVYLFAALGSRSRAKLI-TY------------PKGLR 75 P GG E ++ EL L RRGH V L A + + A+ + TY P+ L Sbjct: 15 PHGYGGIESMMAELVAGLSRRGHDVTLIGAGRAGTSARFLPTYVPAPSARIGESMPEVL- 73 Query: 76 HESIARFVLKKLPERVDIIHDHTFRSALGVTNPKVPTVCTVHIPVKR------RIKYP-- 127 H ++A ++ L DI+HDH+ L VPT+ T H V R+ Y Sbjct: 74 HAAMAHDIVSGL--DADIVHDHSLAGPLTAAARSVPTLVTCHGEVDGELGEYYRVLYDTV 131 Query: 128 --VYVSKRARRLMGN-NKGFCVYNGINTREYEFSTEKHLYLLYIGRIIRNKGVMQAIQVA 184 V +S+ RR+ + N VYN + T + F +K ++L++GR +KG AI VA Sbjct: 132 SMVGISEAQRRIAPDLNWAGVVYNAVETDSFPFREDKEDWVLWLGRFNEDKGAHLAIDVA 191 Query: 185 EKTGKRLIIAGPVKAS---RFFEREVKPRIRNNPNIQYVGPVGGKMKQQLLKHAECVLFP 241 + G+R+++AG + +FE ++PR+ P+ +YVG K++LL A C++FP Sbjct: 192 REAGRRILLAGKLTEQMEHDYFEEHIRPRL--GPDAEYVGEADASRKRELLSAARCLVFP 249 Query: 242 TLWEEPFGLVLIESLGCGTPVLALRNGAVPE-ILSGFPNLICNNISEMAVKVRQKRYPSP 300 WEEPFG+V+IE++ CGTPV+AL GAVPE ++ G + ++ E+ V P Sbjct: 250 ITWEEPFGMVMIEAMACGTPVVALDRGAVPEVVVDGVTGFVRSHAGELPEAVEAAGTLDP 309 Query: 301 HLLRAYVQKHFTNKQMTDSYLRIYHEVIQ 329 H RA+V+ F + MT Y +IY VI Sbjct: 310 HACRAHVRSRFDAEVMTAEYEKIYRRVIS 338 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.139 0.411 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,029,328,685 Number of extensions: 85095890 Number of successful extensions: 189520 Number of sequences better than 1.0e-05: 600 Number of HSP's gapped: 189603 Number of HSP's successfully gapped: 601 Length of query: 344 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 208 Effective length of database: 1,779,438,163 Effective search space: 370123137904 Effective search space used: 370123137904 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 131 (55.1 bits)