BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0212.0006.p (1180 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Q9KBB4.1 Q9KBB4_BACHD BH2014 protein 560 e-157 C3EBK2.1 C3EBK2_BACTU Lpxtg-motif cell wall anchor domain protein 539 e-151 C3DA48.1 C3DA48_BACTU Lpxtg-motif cell wall anchor domain protein 538 e-150 C3CS85.1 C3CS85_BACTU Lpxtg-motif cell wall anchor domain protein 538 e-150 C2ULZ7.1 C2ULZ7_BACCE Lpxtg-motif cell wall anchor domain protein 538 e-150 >Q9KBB4.1 Q9KBB4_BACHD BH2014 protein Length = 1816 Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust. Identities = 357/967 (36%), Positives = 527/967 (54%), Gaps = 40/967 (4%) Query: 38 RDIITSVSMAVYGPDG---QTVTGSVYDVGSSVKLDYTWALPNGHGYVDGDTFAFQLPAQ 94 +IIT V V DG Q + + D+G + + Y W+LPNGHGY G TF FQLP Sbjct: 233 ENIITGVE--VRDEDGNILQADSTNHLDLGDPIGITYHWSLPNGHGYTAGSTFTFQLPDV 290 Query: 95 FELFNDI-NGSLVSDDGEVGSFTVSQSTHQVLMTFNNYIETHDNVQGTLSINTQFDKKVI 153 F L+NDI N LV + EVG+FT++Q V MTFN IE N+ G L + T+ K+ + Sbjct: 291 FHLYNDIENEPLVFNGTEVGTFTITQD-GTVTMTFNEMIEQLFNINGMLQVWTEI-KEDL 348 Query: 154 SGSTVQEIVFPV-NGGTQTIVVNFKPSVGSTIEKKG-VSGGFNADHIDWTVDVNKKLERV 211 G ++IVF V + + V F+ S I+K+G V G+NA I WTVD NK++ + Sbjct: 349 QGDVRRDIVFEVKDEELLRLPVQFRVPSASMIDKQGIVDRGYNATEITWTVDFNKQMREI 408 Query: 212 AGAVVTDPIPEGLALDSTVTLAVYALGVQLDGTVTVGALLDSSKYTAEVTDGT-LKVHFT 270 AV+ DPI G AL + ++ VY L VQL+G+V G L+D S Y+ DG +++F Sbjct: 409 DNAVLRDPIQLGQALQAG-SIEVYELNVQLNGSVVQGDLVDPSNYSIGQIDGDDFQINFG 467 Query: 271 DPAITGAYRIAYTTAVVSDTRSSFTNTASFAGDGREPVSSSATVTIERGGSLNKLATNYE 330 D I AYR+ + T + +S+ N A+ GD +P+ ++A+V +RG + K +T Y Sbjct: 468 D--IDSAYRVVFKTDITDGDATSYQNVATLDGDNIDPMPANASVGTQRGVPIAKTSTGYN 525 Query: 331 WGKQVISWAIEYNYNNKAIPQGSGVLTDLFNNSQELVPGSVKVYPVTLNSSGTAVKGTAL 390 Q ISW I YNYN K + + +LTD F NSQEL+PGS +V +T++ +G A + + Sbjct: 526 SATQTISWEIRYNYNEKTVAEADAILTDWFTNSQELIPGSFRVIRMTIDENGNATEDEEV 585 Query: 391 SENVDYTVTEATGQGKKGFKLEFLHDISSAFRIEYKTKSADRVLTDTTISNTV-SDSTYS 449 S ++T+TE + + GF+L+F DI++A++I Y+T S++RVL + TI NTV + + Sbjct: 586 S---NFTLTETSNASQNGFELQFNEDINNAYKIVYQTTSSERVLGNQTIQNTVETGEGRT 642 Query: 450 VEASQLIRSAIIYKNLSGVDYKNHTTDWKITLNGDGYPMNNVVVTDTFPQGGQKFIPESV 509 A++ I + +K +Y+ T W ITLN D Y M NV +TD F GG I + Sbjct: 643 AGANRSIGQVVFHKRHGTPNYQEKTIPWTITLNDDSYEMTNVTITDVFNNGGLTLIDGTF 702 Query: 510 VVRNASGTVLGASAYTLEYNSPVKPNAGFKVKFTSPVSGTHTIAYRTEFSNDWLYGNTDN 569 +R+ S T++ YT + GF ++FT+P++ H I Y T F + + N Sbjct: 703 TIRSGSTTLVQGVDYTFALDGA----DGFTIEFTNPITTPHVIEYVTAFDYEARQDKSRN 758 Query: 570 FVNN-ARIDWV-GGDGKAQWTEAKGLFIPRAEVKNNGFKAGAYNARYKLFAWTLGINYNS 627 ++N A ++WV G+ ++ +A +F P + +NNGFK G+YNA K W +G+NYN Sbjct: 759 VLDNVATLEWVPEGETDSRSMQATAVFAPDSNTRNNGFKNGSYNAVTKEITWNIGVNYNL 818 Query: 628 KVIADPVITDILTSGQIMADGSLRVFNMNIDANGEPSRGSEIPKNAYTYTV-----GTGN 682 + + D V+ D + GQ + S+ VF M + ++ Y + G GN Sbjct: 819 QELHDAVVEDFIQEGQHLVADSIEVFEMGLTGGANGVNQGDLLTEGVDYDLVMVQDGDGN 878 Query: 683 E-LKVTFKDAISSPYYVVFNTTMQGQLIGPKVDNTAKLLDGTRKVSKDLFASVNIPYGGE 741 +V F+D I SPY++ F T++ +LI N A +L + L A+V++ +GGE Sbjct: 879 PGFRVEFRDTIDSPYWISFKTSLDERLIKQTYQNEA-ILSSSNTDDFRLDAAVSVQHGGE 937 Query: 742 YVYKNGVQNGDKLDWTIAINRSQSTIKNAVLTDIPSRNQILLPDSFHLYPAYAETNGELI 801 YV K+GVQ+G +DW I IN +QST+ NA + D+PS NQILL DSF L+ TNG + Sbjct: 938 YVNKSGVQDGRVIDWRININYTQSTVTNAKIVDVPSPNQILLEDSFQLFSTNVATNGTIT 997 Query: 802 KGGPELVRDSDYTLRVITDEGGKQSFVLSFLHDISYAHILEYKSLIVANTGEKLVNTVNL 861 KG P L R DY L + TDE G ++F LSF + I A+ILEYKS I A E + N V+ Sbjct: 998 KGAP-LERGVDYILEIFTDEDGNETFELSFPNVIDRAYILEYKSFIYAQNNEFVSNQVSF 1056 Query: 862 TGTNVERVTQETT---REIXXXXXXXXXXXXXXXXXLAVQKLDAADSQLLLAGATFELYR 918 G + T E+T I + V K+DA + LAGATF LY Sbjct: 1057 EGDEI--TTNESTNSSESIQVRLSGGSGTGSGERGSIEVTKVDATSGE-TLAGATFVLYD 1113 Query: 919 LNGSERVLINTRTTDAAGSAVFNNIWLGSYVLIETAAPAGYALDTREYPVTIGSSATINL 978 G +++ T T G A F N+ Y+L ET+AP GY + + ++ L Sbjct: 1114 STG--EIVLRTVVTGEDGIATFANLMYDDYILRETSAPEGYLVGINDSEHITLNTELHEL 1171 Query: 979 TVLNTKL 985 TV N K+ Sbjct: 1172 TVENAKI 1178 >C3EBK2.1 C3EBK2_BACTU Lpxtg-motif cell wall anchor domain protein Length = 3123 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 339/969 (34%), Positives = 526/969 (54%), Gaps = 43/969 (4%) Query: 39 DIITSVSMAVYGPDGQTVTGSVY-DVGSSVKLDYTWALPNGHGYVDGDTFAFQLPAQFEL 97 +I+TSV + DG+ T + S +++TW L +GD + F LP F++ Sbjct: 298 NILTSVKLT--DKDGKPFTEDNHPSTDSPANIEFTWELLKSMNVKNGDYYIFDLPKHFKI 355 Query: 98 FNDINGSLV-SDDGEVGSFTVSQSTHQVLMTFNNYIETHDNVQGTLSINTQFDKKVISGS 156 +N IN L S++ ++G+FTV++ +V MTFN+Y+E H +V G L + T+F+K I G+ Sbjct: 356 YNTINSPLYDSENHQIGNFTVTKD-GKVTMTFNDYVEEHPDVAGNLQLKTEFNKAEIKGT 414 Query: 157 TVQEIVFPVNGGTQTIVVNFKPSVGSTIEKKGVSGG-FNADHIDWTVDVNKKLERVAGAV 215 T QEI FP+ +I V+FKP+V + KKG+ N + I+W V++NK + + AV Sbjct: 415 TTQEIPFPIKDKDVSITVDFKPNVQTATNKKGLPDRPINTNEINWKVEMNKTKDPLKNAV 474 Query: 216 VTDPIPEGLALDSTVTLAVYALGVQLDGTVTVGALLDSSKYTAEVTDGT-LKVHFTDPAI 274 D IP+G +L+ ++ VY L V ++G VT GA + + Y +DG+ L++ F D +I Sbjct: 475 FKDNIPQGTSLNKD-SIKVYYLEVDVNGNVTRGAEAEPTDYNIISSDGSKLEIAFKD-SI 532 Query: 275 TGAYRIAYTTAVVSDTRSSFTNTASFAGDGREPVSSSATVTIERGGSLNKLATNYEWGKQ 334 AY+I Y T + + SF N + D ++ ++S+TVT+ RG LNK + Y+ Q Sbjct: 533 NKAYQIEYATKITDENTKSFRNNVTITSDNQKQQNASSTVTVSRGTHLNK-TSKYDPKTQ 591 Query: 335 VISWAIEYNYNNKAIPQGSGVLTDLFNNSQELVPGSVKVYPVTLNSSGTAVKGTALSENV 394 I W I YN + + I + +L D+F+++ EL S+ V + N GT V G A++ Sbjct: 592 TIEWTITYNGDQREIKKADAILKDIFDDTHELDANSIVVKNASYNEKGTLVTGDAVN--- 648 Query: 395 DYTVTEATGQGKKGFKLEFLHDISSAFRIEYKTKSADRVLTDTTISNTVS---DSTYSVE 451 +YTV K GF L+F DI+SA+ I YKTK ++V+ D + N V+ DS+ E Sbjct: 649 NYTV----NNKKNGFDLQFNDDINSAYVITYKTKPTNKVIEDGKVKNKVTADNDSSKENE 704 Query: 452 ASQLIRSAIIYKNLSGVDYKNHTTDWKITLNGDGYPMNNVVVTDTFPQGGQKFIPESVVV 511 AS ++ I N + +YK+ TT W I +N + YP++N ++TDTF GG + + + + Sbjct: 705 ASFKQQNIIKSNNKAETNYKDKTTTWTIIVNNNNYPLSNAIITDTFDHGGLQLKDKKLEI 764 Query: 512 RNASGTVLGASAYTLEYNSPVKPNAGFKVK----FTSPVSGTHTIAYRTEFSNDWLYGNT 567 ++ + T+ + Y L+ + GFK+ + S ++ T + Y T+F L Sbjct: 765 KDGNYTLQAGTDYVLDVT-----DKGFKITLIGTYQSNMTKTLVVKYTTDFDYTKLESGK 819 Query: 568 DNFVNNARIDWVGGDGKAQWTEAKGLFIPRAEVKNNGFKAGAYNARYKLFAWTLGINYNS 627 +F N + W+ D Q + + F P K NG+K G+YNA+ K W +G NYN+ Sbjct: 820 TSFKNTGNLSWIDTDSNPQSNKVEANFDPDTFTKANGYKYGSYNAQTKEITWIIGFNYNN 879 Query: 628 KVIADPVITDILTSGQIMADGSLRVFNMNIDANGEPSR-GSEIPKNAYTY---TVGTGNE 683 I DP + D++ Q + GS+ V +M ++ N + ++ G+ +P Y T N Sbjct: 880 VEIKDPYVIDVIQDKQKLVPGSIEVRDMILNGNPDNAQPGNAVPTEKYELEEPTEKNKNT 939 Query: 684 LKVTFKDAISSPYYVVFNTTMQGQLIGPKVDNTAKLLDGTRKVSKDLFASVNIPYGGEYV 743 LKV FK +I+SPYY++F T++ G+LI N A L DG+ K+ L + GG +V Sbjct: 940 LKVHFKQSINSPYYIIFKTSLDGELIQGTYKNEADLKDGS-KIVNTLTGDTQVNKGGSFV 998 Query: 744 YKNGVQNGDKLDWTIAINRSQSTIKNAVLTDIPSRNQILLPDSFHLYPAYAETNGELIKG 803 K VQ+ + ++W+IAIN SQSTI +AV+TD P+ NQ+++ DSFHLYP + G L K Sbjct: 999 TKKAVQDDNYINWSIAINESQSTIADAVVTDDPTENQVIVEDSFHLYPTTVDPYGNLTKD 1058 Query: 804 G-PELVRDSDYTLRVITDEG-GKQSFVLSFLHDISYAHILEYKSLIVANTGEKLVNTVNL 861 EL +DY L++ TD GKQ F ++FL I A+ILEY+SLI A+ EK+ N + Sbjct: 1059 TVNELKEGTDYKLKITTDNNTGKQHFEIAFLKKIDRAYILEYRSLINADDKEKVSNKAKI 1118 Query: 862 TGTNVERVTQETTR--EIXXXXXXXXXXXXXXXXXLAVQKLDAADSQLLLAGATFELYRL 919 TG + ETT E+ L + K+D + LLAGA F LY Sbjct: 1119 TGNKLTVKNTETTETIEVRMSSGSGGGSATKGRGNLEIIKVDNDNKNALLAGAEFTLYDR 1178 Query: 920 NGSERVLINTRTTDAAGSAVFNNIWLGSYVLIETAAPAGYAL--DTREYP-VTIGSSATI 976 G + +I TTD G A FNN+ Y+L ET AP GY + D ++ V +G+ T Sbjct: 1179 TG--KTVIRKITTDKDGIAKFNNLKRDKYLLKETKAPEGYVISWDLKQGKIVELGTQETT 1236 Query: 977 NLTVLNTKL 985 + N K Sbjct: 1237 TYKLANKKF 1245 Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust. Identities = 40/173 (23%), Positives = 83/173 (47%) Query: 2 VKKRISVALVVLMLVVQYAYSIGFSMKATAAGIENDRDIITSVSMAVYGPDGQTVTGSVY 61 +KK +V L+V +L Q A +KA ++ D + + D ++ Sbjct: 7 MKKIFNVCLIVFVLFSQLASFPYNQVKAETLTGDSLFDTVEMKDATNHIIDEAKNPNNLI 66 Query: 62 DVGSSVKLDYTWALPNGHGYVDGDTFAFQLPAQFELFNDINGSLVSDDGEVGSFTVSQST 121 +GS ++++Y W++ + DT Q+P ++ D+ G LV+D +G + ++ Sbjct: 67 KIGSIIQVEYAWSIKDQQAAHANDTAVVQIPLALKVSKDLQGDLVTDQKNIGQYFITAKD 126 Query: 122 HQVLMTFNNYIETHDNVQGTLSINTQFDKKVISGSTVQEIVFPVNGGTQTIVV 174 +++ + FNN +E + +G + ++T F+ + +G +I FP+ Q I V Sbjct: 127 NKLKLIFNNQVENLKDAKGKIKVDTVFNSTLKTGEKSVQIAFPLGTMVQPISV 179 >C3DA48.1 C3DA48_BACTU Lpxtg-motif cell wall anchor domain protein Length = 3242 Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust. Identities = 339/969 (34%), Positives = 529/969 (54%), Gaps = 43/969 (4%) Query: 39 DIITSVSMAVYGPDGQTVT-GSVYDVGSSVKLDYTWALPNGHGYVDGDTFAFQLPAQFEL 97 +I+TSV + DG+ T + S +++TW L +GD + F LP F++ Sbjct: 324 NILTSVKLT--DKDGKPFTEDNRPSTDSPANIEFTWELLKSMNVKNGDYYIFDLPKHFKI 381 Query: 98 FNDINGSLV-SDDGEVGSFTVSQSTHQVLMTFNNYIETHDNVQGTLSINTQFDKKVISGS 156 +N IN L S++ ++G+FTV++ +V MTFN+Y+E H +V G L + T+F+K I G+ Sbjct: 382 YNTINSPLYDSENHQIGNFTVTKD-GKVTMTFNDYVEEHPDVAGNLQLKTEFNKAEIKGT 440 Query: 157 TVQEIVFPVNGGTQTIVVNFKPSVGSTIEKKGVSGG-FNADHIDWTVDVNKKLERVAGAV 215 T QEI FP+ +I V+FKP+V + KKG+ N + I+W V++NK + + AV Sbjct: 441 TTQEIPFPIKDKDVSITVDFKPNVQTATNKKGLPDRPINTNEINWKVEMNKTKDTLKNAV 500 Query: 216 VTDPIPEGLALDSTVTLAVYALGVQLDGTVTVGALLDSSKYTAEVTDGT-LKVHFTDPAI 274 D IP+G +L+ ++ VY L V ++G VT GA + + Y +DG+ L++ F D +I Sbjct: 501 FKDNIPQGTSLNKD-SIKVYYLEVDVNGNVTRGAEAEPTDYNIISSDGSKLEIAFKD-SI 558 Query: 275 TGAYRIAYTTAVVSDTRSSFTNTASFAGDGREPVSSSATVTIERGGSLNKLATNYEWGKQ 334 AY+I Y T + + SF N + D ++ ++S+TVT+ RG LNK + Y+ Q Sbjct: 559 NKAYQIEYATKITDENIKSFRNNVTITSDNQKQQNASSTVTVSRGTHLNK-TSKYDPKTQ 617 Query: 335 VISWAIEYNYNNKAIPQGSGVLTDLFNNSQELVPGSVKVYPVTLNSSGTAVKGTALSENV 394 I W I YN + + I + +L D+F+++ EL S+ V + N GT V G A++ Sbjct: 618 TIEWTITYNGDQREIKKADAILKDIFDDTHELDANSIVVKNASYNEKGTLVTGDAVN--- 674 Query: 395 DYTVTEATGQGKKGFKLEFLHDISSAFRIEYKTKSADRVLTDTTISNTVS---DSTYSVE 451 +YTV+ K GF L+F DI+SA+ I YKTK ++V+ D + N V+ DS+ E Sbjct: 675 NYTVSNK----KNGFDLQFNDDINSAYVITYKTKPTNKVIEDGKVKNKVTADNDSSKENE 730 Query: 452 ASQLIRSAIIYKNLSGVDYKNHTTDWKITLNGDGYPMNNVVVTDTFPQGGQKFIPESVVV 511 AS ++ I N + +YK+ TT W I +N + YP++N ++TDTF GG + + + + Sbjct: 731 ASFKQQNIIKSNNKAETNYKDKTTTWTIIVNNNNYPLSNAIITDTFDHGGLQLKDKKLEI 790 Query: 512 RNASGTVLGASAYTLEYNSPVKPNAGFKVK----FTSPVSGTHTIAYRTEFSNDWLYGNT 567 ++ + T+ + Y L+ + GFK+ + S ++ T + Y T+F L Sbjct: 791 KDGNYTLQAGTDYVLDVT-----DKGFKITLIGTYQSNMTKTLVVKYTTDFDYTKLESGK 845 Query: 568 DNFVNNARIDWVGGDGKAQWTEAKGLFIPRAEVKNNGFKAGAYNARYKLFAWTLGINYNS 627 ++F N + W+ D Q + + F P K NG+K G+YNA+ K W +G NYN+ Sbjct: 846 NSFKNTGNLSWIDTDSNPQSNKVEANFDPDTFTKANGYKYGSYNAQTKEITWIIGFNYNN 905 Query: 628 KVIADPVITDILTSGQIMADGSLRVFNMNIDANGEPSR-GSEIPKNAYTY---TVGTGNE 683 I DP + D++ Q + GS+ V +M ++ N + ++ G+ +P Y T N Sbjct: 906 VEIKDPYVIDVIQDKQKLVPGSIEVRDMILNGNPDNAQPGNAVPTEKYELEEPTEKNKNT 965 Query: 684 LKVTFKDAISSPYYVVFNTTMQGQLIGPKVDNTAKLLDGTRKVSKDLFASVNIPYGGEYV 743 LKV FK +I+SPYY++F T++ G+LI N A L DG++ V+ L + GG +V Sbjct: 966 LKVHFKQSINSPYYIIFKTSLDGELIQGTYKNEADLKDGSKIVNT-LTGDTQVNKGGSFV 1024 Query: 744 YKNGVQNGDKLDWTIAINRSQSTIKNAVLTDIPSRNQILLPDSFHLYPAYAETNGELIKG 803 K VQ+ + ++W+IAIN SQSTI +AV+TD P+ NQ+++ DSFHLYP + G L K Sbjct: 1025 TKKAVQDDNYINWSIAINESQSTIADAVVTDDPTENQVIVEDSFHLYPTTIDPYGNLTKD 1084 Query: 804 G-PELVRDSDYTLRVITDEG-GKQSFVLSFLHDISYAHILEYKSLIVANTGEKLVNTVNL 861 EL +DY L++ TD GKQ F ++FL I A+ILEY+SLI A+ EK+ N + Sbjct: 1085 TVNELKEGTDYKLKITTDNNTGKQHFEIAFLKKIDRAYILEYRSLINADDKEKVSNKAKI 1144 Query: 862 TGTNVERVTQETTR--EIXXXXXXXXXXXXXXXXXLAVQKLDAADSQLLLAGATFELYRL 919 TG + ETT E+ L + K+D + LLAGA F LY Sbjct: 1145 TGNKLTVKNTETTETIEVRMSSGSGGGSATKGRGNLEIIKVDNDNKNALLAGAEFTLYDR 1204 Query: 920 NGSERVLINTRTTDAAGSAVFNNIWLGSYVLIETAAPAGYAL--DTREYP-VTIGSSATI 976 G + +I TTD G A FNN+ Y+L ET AP GY + D ++ V +G+ T Sbjct: 1205 TG--KTVIRKITTDKDGIAKFNNLKRDKYLLKETKAPEGYVISWDLKQGKIVELGTQETT 1262 Query: 977 NLTVLNTKL 985 + N K Sbjct: 1263 TYKLANKKF 1271 Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 6/176 (3%) Query: 2 VKKRISVALVVLMLVVQYAYSIGFSMKATAAGIENDRDIITSVSMAV---YGPDGQTVTG 58 +KK +V L+V +L Q A F A I + +V M + D Sbjct: 7 MKKLFNVCLIVFVLFSQLA---SFPYNQVKAEILTGDSLFDTVEMKDATNHIIDEAKNPN 63 Query: 59 SVYDVGSSVKLDYTWALPNGHGYVDGDTFAFQLPAQFELFNDINGSLVSDDGEVGSFTVS 118 ++ +GS+++++Y W++ + DT Q+P ++ D+ G LV+D +G + ++ Sbjct: 64 NLIKIGSTIQVEYAWSIKDQQAAHANDTAVVQIPLALKVSKDLQGDLVTDQKNIGQYFIT 123 Query: 119 QSTHQVLMTFNNYIETHDNVQGTLSINTQFDKKVISGSTVQEIVFPVNGGTQTIVV 174 +++ + FNN +E + +G + ++T F+ + +G +I FP+ Q I V Sbjct: 124 AKDNKLKLIFNNQVENLKDAKGKIKVDTVFNSTLKTGEKSVQIAFPLGTMVQPISV 179 >C3CS85.1 C3CS85_BACTU Lpxtg-motif cell wall anchor domain protein Length = 3242 Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust. Identities = 339/969 (34%), Positives = 529/969 (54%), Gaps = 43/969 (4%) Query: 39 DIITSVSMAVYGPDGQTVT-GSVYDVGSSVKLDYTWALPNGHGYVDGDTFAFQLPAQFEL 97 +I+TSV + DG+ T + S +++TW L +GD + F LP F++ Sbjct: 324 NILTSVKLT--DKDGKPFTEDNRPSTDSPANIEFTWELLKSMNVKNGDYYIFDLPKHFKI 381 Query: 98 FNDINGSLV-SDDGEVGSFTVSQSTHQVLMTFNNYIETHDNVQGTLSINTQFDKKVISGS 156 +N IN L S++ ++G+FTV++ +V MTFN+Y+E H +V G L + T+F+K I G+ Sbjct: 382 YNTINSPLYDSENHQIGNFTVTKD-GKVTMTFNDYVEEHPDVAGNLQLKTEFNKAEIKGT 440 Query: 157 TVQEIVFPVNGGTQTIVVNFKPSVGSTIEKKGVSGG-FNADHIDWTVDVNKKLERVAGAV 215 T QEI FP+ +I V+FKP+V + KKG+ N + I+W V++NK + + AV Sbjct: 441 TTQEIPFPIKDKDVSITVDFKPNVQTATNKKGLPDRPINTNEINWKVEMNKTKDTLKNAV 500 Query: 216 VTDPIPEGLALDSTVTLAVYALGVQLDGTVTVGALLDSSKYTAEVTDGT-LKVHFTDPAI 274 D IP+G +L+ ++ VY L V ++G VT GA + + Y +DG+ L++ F D +I Sbjct: 501 FKDNIPQGTSLNKD-SIKVYYLEVDVNGNVTRGAEAEPTDYNIISSDGSKLEIAFKD-SI 558 Query: 275 TGAYRIAYTTAVVSDTRSSFTNTASFAGDGREPVSSSATVTIERGGSLNKLATNYEWGKQ 334 AY+I Y T + + SF N + D ++ ++S+TVT+ RG LNK + Y+ Q Sbjct: 559 NKAYQIEYATKITDENIKSFRNNVTITSDNQKQQNASSTVTVSRGTHLNK-TSKYDPKTQ 617 Query: 335 VISWAIEYNYNNKAIPQGSGVLTDLFNNSQELVPGSVKVYPVTLNSSGTAVKGTALSENV 394 I W I YN + + I + +L D+F+++ EL S+ V + N GT V G A++ Sbjct: 618 TIEWTITYNGDQREIKKADAILKDIFDDTHELDANSIVVKNASYNEKGTLVTGDAVN--- 674 Query: 395 DYTVTEATGQGKKGFKLEFLHDISSAFRIEYKTKSADRVLTDTTISNTVS---DSTYSVE 451 +YTV+ K GF L+F DI+SA+ I YKTK ++V+ D + N V+ DS+ E Sbjct: 675 NYTVSNK----KNGFDLQFNDDINSAYVITYKTKPTNKVIEDGKVKNKVTADNDSSKENE 730 Query: 452 ASQLIRSAIIYKNLSGVDYKNHTTDWKITLNGDGYPMNNVVVTDTFPQGGQKFIPESVVV 511 AS ++ I N + +YK+ TT W I +N + YP++N ++TDTF GG + + + + Sbjct: 731 ASFKQQNIIKSNNKAETNYKDKTTTWTIIVNNNNYPLSNAIITDTFDHGGLQLKDKKLEI 790 Query: 512 RNASGTVLGASAYTLEYNSPVKPNAGFKVK----FTSPVSGTHTIAYRTEFSNDWLYGNT 567 ++ + T+ + Y L+ + GFK+ + S ++ T + Y T+F L Sbjct: 791 KDGNYTLQAGTDYVLDVT-----DKGFKITLIGTYQSNMTKTLVVKYTTDFDYTKLESGK 845 Query: 568 DNFVNNARIDWVGGDGKAQWTEAKGLFIPRAEVKNNGFKAGAYNARYKLFAWTLGINYNS 627 ++F N + W+ D Q + + F P K NG+K G+YNA+ K W +G NYN+ Sbjct: 846 NSFKNTGNLSWIDTDSNPQSNKVEANFDPDTFTKANGYKYGSYNAQTKEITWIIGFNYNN 905 Query: 628 KVIADPVITDILTSGQIMADGSLRVFNMNIDANGEPSR-GSEIPKNAYTY---TVGTGNE 683 I DP + D++ Q + GS+ V +M ++ N + ++ G+ +P Y T N Sbjct: 906 VEIKDPYVIDVIQDKQKLVPGSIEVRDMILNGNPDNAQPGNAVPTEKYELEEPTEKNKNT 965 Query: 684 LKVTFKDAISSPYYVVFNTTMQGQLIGPKVDNTAKLLDGTRKVSKDLFASVNIPYGGEYV 743 LKV FK +I+SPYY++F T++ G+LI N A L DG++ V+ L + GG +V Sbjct: 966 LKVHFKQSINSPYYIIFKTSLDGELIQGTYKNEADLKDGSKIVNT-LTGDTQVNKGGSFV 1024 Query: 744 YKNGVQNGDKLDWTIAINRSQSTIKNAVLTDIPSRNQILLPDSFHLYPAYAETNGELIKG 803 K VQ+ + ++W+IAIN SQSTI +AV+TD P+ NQ+++ DSFHLYP + G L K Sbjct: 1025 TKKAVQDDNYINWSIAINESQSTIADAVVTDDPTENQVIVEDSFHLYPTTIDPYGNLTKD 1084 Query: 804 G-PELVRDSDYTLRVITDEG-GKQSFVLSFLHDISYAHILEYKSLIVANTGEKLVNTVNL 861 EL +DY L++ TD GKQ F ++FL I A+ILEY+SLI A+ EK+ N + Sbjct: 1085 TVNELKEGTDYKLKITTDNNTGKQHFEIAFLKKIDRAYILEYRSLINADDKEKVSNKAKI 1144 Query: 862 TGTNVERVTQETTR--EIXXXXXXXXXXXXXXXXXLAVQKLDAADSQLLLAGATFELYRL 919 TG + ETT E+ L + K+D + LLAGA F LY Sbjct: 1145 TGNKLTVKNTETTETIEVRMSSGSGGGSATKGRGNLEIIKVDNDNKNALLAGAEFTLYDR 1204 Query: 920 NGSERVLINTRTTDAAGSAVFNNIWLGSYVLIETAAPAGYAL--DTREYP-VTIGSSATI 976 G + +I TTD G A FNN+ Y+L ET AP GY + D ++ V +G+ T Sbjct: 1205 TG--KTVIRKITTDKDGIAKFNNLKRDKYLLKETKAPEGYVISWDLKQGKIVELGTQETT 1262 Query: 977 NLTVLNTKL 985 + N K Sbjct: 1263 TYKLANKKF 1271 Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 84/176 (47%), Gaps = 6/176 (3%) Query: 2 VKKRISVALVVLMLVVQYAYSIGFSMKATAAGIENDRDIITSVSMAV---YGPDGQTVTG 58 +KK +V L+V +L Q A F A I + +V M + D Sbjct: 7 MKKLFNVCLIVFVLFSQLA---SFPYNQVKAEILTGDSLFDTVEMKDATNHIIDEAKNPN 63 Query: 59 SVYDVGSSVKLDYTWALPNGHGYVDGDTFAFQLPAQFELFNDINGSLVSDDGEVGSFTVS 118 ++ +GS+++++Y W++ + DT Q+P ++ D+ G LV+D +G + ++ Sbjct: 64 NLIKIGSTIQVEYAWSIKDQQAAHANDTAVVQIPLALKVSKDLQGDLVTDQKNIGQYFIT 123 Query: 119 QSTHQVLMTFNNYIETHDNVQGTLSINTQFDKKVISGSTVQEIVFPVNGGTQTIVV 174 +++ + FNN +E + +G + ++T F+ + +G +I FP+ Q I V Sbjct: 124 AKDNKLKLIFNNQVENLKDAKGKIKVDTVFNSTLKTGEKSVQIAFPLGTMVQPISV 179 >C2ULZ7.1 C2ULZ7_BACCE Lpxtg-motif cell wall anchor domain protein Length = 3123 Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust. Identities = 339/969 (34%), Positives = 527/969 (54%), Gaps = 43/969 (4%) Query: 39 DIITSVSMAVYGPDGQTVT-GSVYDVGSSVKLDYTWALPNGHGYVDGDTFAFQLPAQFEL 97 +I+TSV + DG+ T + S +++TW L +GD + F LP F++ Sbjct: 298 NILTSVKLT--DKDGKPFTEDNRPSTDSPANIEFTWELLKSMNVKNGDYYIFDLPKHFKI 355 Query: 98 FNDINGSLV-SDDGEVGSFTVSQSTHQVLMTFNNYIETHDNVQGTLSINTQFDKKVISGS 156 +N IN L S++ ++G+FTV++ +V MTFN+Y+E H +V G L + T+F+K I G+ Sbjct: 356 YNTINSPLYDSENHQIGNFTVTKD-GKVTMTFNDYVEEHPDVAGNLQLKTEFNKAEIKGT 414 Query: 157 TVQEIVFPVNGGTQTIVVNFKPSVGSTIEKKGVSGG-FNADHIDWTVDVNKKLERVAGAV 215 T QEI FP+ +I V+FKP+V + KKG+ N + I+W V++NK + + AV Sbjct: 415 TTQEIPFPIKDKDVSITVDFKPNVQTATNKKGLPDRPINTNEINWKVEMNKTKDPLKNAV 474 Query: 216 VTDPIPEGLALDSTVTLAVYALGVQLDGTVTVGALLDSSKYTAEVTDGT-LKVHFTDPAI 274 D IP+G +L+ ++ VY L V ++G VT GA + + Y +DG+ L++ F D +I Sbjct: 475 FKDNIPQGTSLNKD-SIKVYYLEVDVNGNVTRGAEAEPTDYNIISSDGSKLEIAFKD-SI 532 Query: 275 TGAYRIAYTTAVVSDTRSSFTNTASFAGDGREPVSSSATVTIERGGSLNKLATNYEWGKQ 334 AY+I Y T + + SF N + D ++ ++S+TVT+ RG LNK + Y+ Q Sbjct: 533 NKAYQIEYATKITDENIKSFRNNVTITSDNQKQQNASSTVTVSRGTHLNK-TSKYDPKTQ 591 Query: 335 VISWAIEYNYNNKAIPQGSGVLTDLFNNSQELVPGSVKVYPVTLNSSGTAVKGTALSENV 394 I W I YN + + I + +L D+F+++ EL S+ V + N GT V G A++ Sbjct: 592 TIEWTITYNGDQREIKKADAILKDIFDDTHELDANSIVVKNASYNEKGTLVTGDAVN--- 648 Query: 395 DYTVTEATGQGKKGFKLEFLHDISSAFRIEYKTKSADRVLTDTTISNTVS---DSTYSVE 451 +YTV K GF L+F DI+SA+ I YKTK ++V+ D + N V+ DS+ E Sbjct: 649 NYTV----NNKKNGFDLQFNDDINSAYVITYKTKPTNKVIEDGKVKNKVTADNDSSKENE 704 Query: 452 ASQLIRSAIIYKNLSGVDYKNHTTDWKITLNGDGYPMNNVVVTDTFPQGGQKFIPESVVV 511 AS ++ I N + +YK+ TT W I +N + YP++N ++TDTF GG + + + + Sbjct: 705 ASFKQQNIIKSNNKAETNYKDKTTTWTIIVNNNNYPLSNAIITDTFDHGGLQLKDKKLEI 764 Query: 512 RNASGTVLGASAYTLEYNSPVKPNAGFKVK----FTSPVSGTHTIAYRTEFSNDWLYGNT 567 ++ + T+ + Y L+ + GFK+ + S ++ T + Y T+F L Sbjct: 765 KDGNYTLQAGTDYVLDVT-----DKGFKITLIGTYQSNMTKTLVVKYTTDFDYTKLESGK 819 Query: 568 DNFVNNARIDWVGGDGKAQWTEAKGLFIPRAEVKNNGFKAGAYNARYKLFAWTLGINYNS 627 +F N + W+ D Q + + F P K NG+K G+YNA+ K W +G NYN+ Sbjct: 820 TSFKNTGNLSWIDTDSNPQSNKVEANFDPDTFTKANGYKYGSYNAQTKEITWIIGFNYNN 879 Query: 628 KVIADPVITDILTSGQIMADGSLRVFNMNIDANGEPSR-GSEIPKNAYTY---TVGTGNE 683 I DP + D++ Q + GS+ V +M ++ N + ++ G+ +P Y T N Sbjct: 880 VEIKDPYVIDVIQDKQKLVPGSIEVRDMILNGNPDNAQPGNAVPTEKYELEEPTEKNKNT 939 Query: 684 LKVTFKDAISSPYYVVFNTTMQGQLIGPKVDNTAKLLDGTRKVSKDLFASVNIPYGGEYV 743 LKV FK +I+SPYY++F T++ G+LI N A L DG++ V+ L + GG +V Sbjct: 940 LKVHFKQSINSPYYIIFKTSLDGELIQGTYKNEADLKDGSKIVNT-LTGDTQVNKGGSFV 998 Query: 744 YKNGVQNGDKLDWTIAINRSQSTIKNAVLTDIPSRNQILLPDSFHLYPAYAETNGELIKG 803 K VQ+ + ++W+IAIN SQSTI +AV+TD P+ NQ+++ DSFHLYP + G L K Sbjct: 999 TKKAVQDDNYINWSIAINESQSTIADAVVTDDPTENQVIVEDSFHLYPTTVDPYGNLTKD 1058 Query: 804 G-PELVRDSDYTLRVITDEG-GKQSFVLSFLHDISYAHILEYKSLIVANTGEKLVNTVNL 861 EL +DY L++ TD GKQ F ++FL I A+ILEY+SLI A+ EK+ N + Sbjct: 1059 TVNELKEGTDYKLKITTDNNTGKQHFEIAFLKKIDRAYILEYRSLINADDKEKVSNKAKI 1118 Query: 862 TGTNVERVTQETTR--EIXXXXXXXXXXXXXXXXXLAVQKLDAADSQLLLAGATFELYRL 919 TG + ETT E+ L + K+D + LLAGA F LY Sbjct: 1119 TGNKLTVKNTETTETIEVRMSSGSGGGSATKGRGNLEIIKVDNDNKNALLAGAEFTLYDR 1178 Query: 920 NGSERVLINTRTTDAAGSAVFNNIWLGSYVLIETAAPAGYAL--DTREYP-VTIGSSATI 976 G + +I TTD G A FNN+ Y+L ET AP GY + D ++ V +G+ T Sbjct: 1179 TG--KTVIRKITTDKDGIAKFNNLKRDKYLLKETKAPEGYVISWDLKQGKIVELGTQETT 1236 Query: 977 NLTVLNTKL 985 + N K Sbjct: 1237 TYKLANKKF 1245 Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 38/173 (21%), Positives = 83/173 (47%) Query: 2 VKKRISVALVVLMLVVQYAYSIGFSMKATAAGIENDRDIITSVSMAVYGPDGQTVTGSVY 61 +KK +V L+V +L Q A ++A ++ D + + D ++ Sbjct: 7 MKKLFNVCLIVFVLFSQLASFPYNQVRAETLTGDSLFDTVEMKDATNHIIDESKNPNNLI 66 Query: 62 DVGSSVKLDYTWALPNGHGYVDGDTFAFQLPAQFELFNDINGSLVSDDGEVGSFTVSQST 121 +GS+++++Y W++ + DT Q+P ++ D+ G LV+D +G + ++ Sbjct: 67 KIGSTIQVEYAWSIKDQQVAHANDTAVVQIPLALKVSKDLQGDLVTDQKNIGQYFITAKD 126 Query: 122 HQVLMTFNNYIETHDNVQGTLSINTQFDKKVISGSTVQEIVFPVNGGTQTIVV 174 +++ + FN+ +E + +G + ++T F+ + G +I FP+ Q I V Sbjct: 127 NKLKLIFNDQVENLKDAKGKIKVDTVFNSTLKPGEKSVQIAFPLGTMVQPISV 179 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.132 0.376 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 6,478,694,711 Number of extensions: 280925919 Number of successful extensions: 523089 Number of sequences better than 1.0e-05: 148 Number of HSP's gapped: 521437 Number of HSP's successfully gapped: 229 Length of query: 1180 Length of database: 3,060,696,203 Length adjustment: 147 Effective length of query: 1033 Effective length of database: 1,675,806,998 Effective search space: 1731108628934 Effective search space used: 1731108628934 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 137 (57.4 bits)