BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0210.0005.p (472 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DAU9.1 B1DAU9_9BACL Carbohydrate binding family 6 645 0.0 B3KF22.1 B3KF22_9BACI Carbohydrate binding family 6 631 e-179 A4XM53.1 A4XM53_CALS8 Carbohydrate binding family 6 601 e-170 O30426.1 O30426_CALSA Xylanase 598 e-169 B9MMA2.1 B9MMA2_ANATD Glycoside hydrolase family 43 584 e-165 >B1DAU9.1 B1DAU9_9BACL Carbohydrate binding family 6 Length = 513 Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust. Identities = 327/467 (70%), Positives = 368/467 (78%), Gaps = 5/467 (1%) Query: 3 AAGKVQPNGNPLVAHRYGADPYALVFGDRVYLYMTNDALEYDENGVVKENSYSSINTITV 62 A GKV P GNPLV+H++GADPYALVF RVYLY TND LEY E+G VK+N+Y +IN I + Sbjct: 48 AVGKVPPQGNPLVSHKFGADPYALVFDGRVYLYTTNDVLEYGEDGSVKDNTYGNINKIGI 107 Query: 63 ISSADLVNWTDHGPIAVAGPEGAAKWATQSWAPAAVHTVINGQDKFFLYFANNASGIGVL 122 ISSADLVNWTDHG I VAG EGAAKWATQSWAPA H VINGQDKFFLYFANNASGIGVL Sbjct: 108 ISSADLVNWTDHGVINVAGSEGAAKWATQSWAPAIAHKVINGQDKFFLYFANNASGIGVL 167 Query: 123 SSDSPVGPWVDPIGEALILRSTPGVEDVTWLFDPAVLVDDDGKGYIYFGGGVPEGQFAEP 182 DSP GPW DPIG+ALILRSTPGVE VTWLFDPAVLVDDDGK YIYFGGGVPEG+ P Sbjct: 168 EGDSPTGPWKDPIGKALILRSTPGVEKVTWLFDPAVLVDDDGKAYIYFGGGVPEGKDESP 227 Query: 183 GTARVMPLGEDMTSVVGTAKVIPAPFMFEDAGIHKWNGVYYYTYCSNFYDGERPEGSPPA 242 TARVM LG+DM SVVG A+VIPAPFMFEDAGI+K+NG YY+TYCSNFY+G+RPEGSPPA Sbjct: 228 DTARVMQLGDDMISVVGEAQVIPAPFMFEDAGINKYNGTYYFTYCSNFYNGDRPEGSPPA 287 Query: 243 GEIAYMTSDHPMGPWTYHRTILKNPGHFFGVSGNNHHAVFQFHDSWYIAYHAQTLSKAQG 302 GEIAYMTSD PMGPWTY TILKNPGHFFGV GNNHH +F+F ++WYIAYHAQTLSKA G Sbjct: 288 GEIAYMTSDSPMGPWTYRGTILKNPGHFFGVGGNNHHVIFEFKNAWYIAYHAQTLSKAMG 347 Query: 303 IANGYRSTHLNRLT-HNEDGSIQEIHADYEGVQQLAALNPYERIPAATMGWSAGVKTEFL 361 + GYRSTHLN L + D SIQEI A+YEG Q+ NPYE + +AT+GW+AG+ TE Sbjct: 348 VPKGYRSTHLNELKFRDADRSIQEITANYEGAAQIQLFNPYESVESATIGWNAGIATE-A 406 Query: 362 TAGGGQAVTDIERGGWIGLSGLDFGS-GAESFQASVLSLEAGGMLELHLDDPAGPIIGRL 420 + G VTDI+ G WI LS +DFGS GA F ASV A ++EL LD G +IG L Sbjct: 407 SPDGSLTVTDIDSGDWIALSKVDFGSNGASGFAASVSEAAAAAIVELRLDAADGKLIGTL 466 Query: 421 AVPAADGTQEWVELKTEVQGAEGVHNLYLVFTGESDKSLFKLAAWQF 467 V A G Q E +TEV GA GVH+LYL+F G+ D LFKL +WQF Sbjct: 467 PVQAT-GDQA-AEYQTEVSGAVGVHDLYLLFKGQPDSKLFKLHSWQF 511 >B3KF22.1 B3KF22_9BACI Carbohydrate binding family 6 Length = 558 Score = 631 bits (1627), Expect = e-179, Method: Compositional matrix adjust. Identities = 303/471 (64%), Positives = 357/471 (75%), Gaps = 6/471 (1%) Query: 3 AAGKVQPNGNPLVAHRYGADPYALVFGDRVYLYMTNDALEYDENGVVKENSYSSINTITV 62 A GK+ PNGNP+V+H++GADPYAL RVYLY T DALEYD +G VK+NSYS+IN ++V Sbjct: 86 AIGKIPPNGNPVVSHKFGADPYALAVDGRVYLYNTYDALEYDGDGNVKDNSYSTINKLSV 145 Query: 63 ISSADLVNWTDHGPIAVAGPEGAAKWATQSWAPAAVHTVINGQDKFFLYFANNASGIGVL 122 ISS+DLVNWTDHG I VAGP GAA WATQSWAPAA H VI+G+D+FFLYFANNAS IGVL Sbjct: 146 ISSSDLVNWTDHGAIQVAGPTGAAAWATQSWAPAAAHKVIHGEDRFFLYFANNASSIGVL 205 Query: 123 SSDSPVGPWVDPIGEALILRSTPGVEDVTWLFDPAVLVDDDGKGYIYFGGGVPEGQFAEP 182 +SDSPVGPW+DPIG+ LI R+TPGVE VTWLFDPAVLVDDDGK YIYFGGGVPEG+ P Sbjct: 206 TSDSPVGPWIDPIGKPLITRNTPGVEGVTWLFDPAVLVDDDGKAYIYFGGGVPEGKAEMP 265 Query: 183 GTARVMPLGEDMTSVVGTAKVIPAPFMFEDAGIHKWNGVYYYTYCSNFYDGERPEGSPPA 242 TARVM LGEDM SV+G A IPAP+MFED+GI+K+ G YYYTYCSNF G RPE SPP Sbjct: 266 DTARVMQLGEDMVSVLGEAVTIPAPYMFEDSGINKFGGKYYYTYCSNFSGGTRPENSPPP 325 Query: 243 GEIAYMTSDHPMGPWTYHRTILKNPGHFFGVSGNNHHAVFQFHDSWYIAYHAQTLSKAQG 302 GEIAYM S+HPMGPW Y TILKNPGHFFGV GNNHH +FQ +WYIAYHAQTLSK+ G Sbjct: 326 GEIAYMVSEHPMGPWIYKGTILKNPGHFFGVGGNNHHVIFQLRQNWYIAYHAQTLSKSMG 385 Query: 303 IANGYRSTHLNRLTHNEDGSIQEIHADYEGVQQLAALNPYERIPAATMGWSAGVKTEFLT 362 + GYRSTHLNR+ DG+I+EI AD EGV+ + LNP++R A TM W+AG++ Sbjct: 386 VPKGYRSTHLNRVYFEPDGTIREIVADMEGVKGIQPLNPFQRTEAVTMAWNAGIQVNTSM 445 Query: 363 AGGGQA------VTDIERGGWIGLSGLDFGSGAESFQASVLSLEAGGMLELHLDDPAGPI 416 A VTDI WI ++ DFG GA +F A V ++AGG LEL LD P G Sbjct: 446 AAEDSQGSPILRVTDIHDRDWIAVANADFGKGASAFTAWVSGIDAGGRLELRLDRPDGER 505 Query: 417 IGRLAVPAADGTQEWVELKTEVQGAEGVHNLYLVFTGESDKSLFKLAAWQF 467 IG++ VP + GT++ E EV GA G+H+LY +FTG+ D+ LF AWQF Sbjct: 506 IGKVDVPPSSGTEQRREFSIEVSGASGIHHLYFIFTGQRDQRLFDFEAWQF 556 >A4XM53.1 A4XM53_CALS8 Carbohydrate binding family 6 Length = 1347 Score = 601 bits (1549), Expect = e-170, Method: Compositional matrix adjust. Identities = 279/468 (59%), Positives = 349/468 (74%), Gaps = 3/468 (0%) Query: 4 AGKVQPNGNPLVAHRYGADPYALVFGDRVYLYMTNDALEYDENGVVKENSYSSINTITVI 63 GK+ PN NPL+AH++GADP LV+ +RVY+Y+TND LEYD+NG +K+N+YS IN IT+I Sbjct: 881 VGKIPPNANPLIAHKFGADPAVLVYKNRVYIYLTNDILEYDDNGNIKDNTYSKINKITII 940 Query: 64 SSADLVNWTDHGPIAVAGPEGAAKWATQSWAPAAVHTVINGQDKFFLYFANNASGIGVLS 123 SS DL+NWTDHG I VAGP G AKWATQSWAP+ + ING+DKFFLYFANNASGIGVL+ Sbjct: 941 SSDDLINWTDHGEIEVAGPNGIAKWATQSWAPSIAYKKINGKDKFFLYFANNASGIGVLT 1000 Query: 124 SDSPVGPWVDPIGEALILRSTPGVEDVTWLFDPAVLVDDDGKGYIYFGGGVPEGQFAEPG 183 SD+PVGPW DPIG LI RSTPGVE V WLFDPAVLVD DGK YIYFGGGVP+GQ A P Sbjct: 1001 SDTPVGPWEDPIGRPLISRSTPGVEGVVWLFDPAVLVDGDGKAYIYFGGGVPQGQDAMPN 1060 Query: 184 TARVMPLGEDMTSVVGTAKVIPAPFMFEDAGIHKWNGVYYYTYCSNFYDGERPEGSPPAG 243 TARVM LG+DM SVVG+A IPAPFMFED+GI+K YYY+YC+NFY G RP+GSPPAG Sbjct: 1061 TARVMQLGDDMISVVGSAVTIPAPFMFEDSGINKIGNTYYYSYCTNFYSGARPQGSPPAG 1120 Query: 244 EIAYMTSDHPMGPWTYHRTILKNPGHFFGVSGNNHHAVFQFHDSWYIAYHAQTLSKAQGI 303 IAYMTS PMGPW Y ILKNPG+FFGV GNNHH +F+F+ WYIAYHAQTL+K G+ Sbjct: 1121 VIAYMTSKSPMGPWEYKGVILKNPGNFFGVGGNNHHQLFEFNGKWYIAYHAQTLAKDMGV 1180 Query: 304 ANGYRSTHLNRLTHNEDGSIQEIHADYEGVQQLAALNPYERIPAATMGWSAGVKTEFLTA 363 A GYRS H+N++ E+G I+E+ ADY G+ Q+ +PY+ + A T W AG+ T+ A Sbjct: 1181 AKGYRSPHINQV-EIENGKIKEVIADYRGIAQVKYFDPYKMVEAETFAWCAGISTKKANA 1239 Query: 364 GGGQAVTDIERGGWIGLSGLDFGS-GAESFQASVLSLEAGGMLELHLDDPAGPIIGRLAV 422 +T I+ G WI LS +DFG+ G + F+A V ++ G +E+ +D G IIG + V Sbjct: 1240 SNSMCLTGIDSGDWIALSKVDFGNVGPQKFEAMVSNINGKGYIEIKIDSVDGKIIGVVEV 1299 Query: 423 -PAADGTQEWVELKTEVQGAEGVHNLYLVFTGESDKSLFKLAAWQFTE 469 P + WV+++T V GVH++Y VF GE++K+LF + W+F + Sbjct: 1300 QPQDSSSTHWVKVETNVDKVTGVHDVYFVFKGENEKNLFDMDCWKFVK 1347 >O30426.1 O30426_CALSA Xylanase Length = 1347 Score = 598 bits (1542), Expect = e-169, Method: Compositional matrix adjust. Identities = 278/468 (59%), Positives = 348/468 (74%), Gaps = 3/468 (0%) Query: 4 AGKVQPNGNPLVAHRYGADPYALVFGDRVYLYMTNDALEYDENGVVKENSYSSINTITVI 63 GK+ PN NPL+AH++GADP LV+ +RVY+Y+TND LEYD+NG +K+N+YS IN IT+I Sbjct: 881 VGKIPPNANPLIAHKFGADPAVLVYKNRVYIYLTNDILEYDDNGNIKDNTYSKINKITII 940 Query: 64 SSADLVNWTDHGPIAVAGPEGAAKWATQSWAPAAVHTVINGQDKFFLYFANNASGIGVLS 123 SS DL+NWTDHG I VAGP G AKWATQSWAP+ + ING+DKFFLYFANNASGIGVL+ Sbjct: 941 SSDDLINWTDHGEIEVAGPNGIAKWATQSWAPSIAYKKINGKDKFFLYFANNASGIGVLT 1000 Query: 124 SDSPVGPWVDPIGEALILRSTPGVEDVTWLFDPAVLVDDDGKGYIYFGGGVPEGQFAEPG 183 SD+PVGPW DPIG LI RSTPGVE V WLFDPAVLVD DGK YIYFGGGVP+GQ A P Sbjct: 1001 SDTPVGPWEDPIGRPLISRSTPGVEGVVWLFDPAVLVDGDGKAYIYFGGGVPQGQDAMPN 1060 Query: 184 TARVMPLGEDMTSVVGTAKVIPAPFMFEDAGIHKWNGVYYYTYCSNFYDGERPEGSPPAG 243 TARVM LG+DM SVVG+A IPAPFMFED+GI+K YYY+YC+NFY G RP+GSPPAG Sbjct: 1061 TARVMQLGDDMISVVGSAVTIPAPFMFEDSGINKIGNTYYYSYCTNFYSGARPQGSPPAG 1120 Query: 244 EIAYMTSDHPMGPWTYHRTILKNPGHFFGVSGNNHHAVFQFHDSWYIAYHAQTLSKAQGI 303 IAYMTS PMGPW Y ILKNPG+FFGV GNNHH +F+F+ WYIAYHAQTL+K G+ Sbjct: 1121 VIAYMTSKSPMGPWEYKGVILKNPGNFFGVGGNNHHQLFEFNGKWYIAYHAQTLAKDMGV 1180 Query: 304 ANGYRSTHLNRLTHNEDGSIQEIHADYEGVQQLAALNPYERIPAATMGWSAGVKTEFLTA 363 A GYRS H+ ++ E+G I+E+ ADY G+ Q+ +PY+ + A T W AG+ T+ A Sbjct: 1181 AKGYRSPHITQV-EIENGKIKEVIADYRGIAQVKYFDPYKMVEAETFAWCAGISTKKANA 1239 Query: 364 GGGQAVTDIERGGWIGLSGLDFGS-GAESFQASVLSLEAGGMLELHLDDPAGPIIGRLAV 422 +T I+ G WI LS +DFG+ G + F+A V ++ G +E+ +D G IIG + V Sbjct: 1240 SNSMCLTGIDSGDWIALSKVDFGNVGPQKFEAMVSNINGKGYIEIKIDSVDGKIIGVVEV 1299 Query: 423 -PAADGTQEWVELKTEVQGAEGVHNLYLVFTGESDKSLFKLAAWQFTE 469 P + WV+++T V GVH++Y VF GE++K+LF + W+F + Sbjct: 1300 QPQDSSSTHWVKVETNVDKVTGVHDVYFVFKGENEKNLFDMDCWKFVK 1347 >B9MMA2.1 B9MMA2_ANATD Glycoside hydrolase family 43 Length = 1338 Score = 584 bits (1505), Expect = e-165, Method: Compositional matrix adjust. Identities = 275/467 (58%), Positives = 338/467 (72%), Gaps = 3/467 (0%) Query: 5 GKVQPNGNPLVAHRYGADPYALVFGDRVYLYMTNDALEYDENGVVKENSYSSINTITVIS 64 GK+ PN NPL++H++GADP LV+ DRVY+Y+TND LEYD +G + +N+YS IN ITVIS Sbjct: 873 GKIPPNANPLISHKFGADPAVLVYNDRVYVYLTNDILEYDADGNIVDNTYSKINKITVIS 932 Query: 65 SADLVNWTDHGPIAVAGPEGAAKWATQSWAPAAVHTVINGQDKFFLYFANNASGIGVLSS 124 S DLVNWTDHG I VAGP G AKWATQSWAP+ + ING+DKFFLYFANNASGIGVL+S Sbjct: 933 SEDLVNWTDHGEIEVAGPNGVAKWATQSWAPSIAYKKINGKDKFFLYFANNASGIGVLTS 992 Query: 125 DSPVGPWVDPIGEALILRSTPGVEDVTWLFDPAVLVDDDGKGYIYFGGGVPEGQFAEPGT 184 DSP+GPWVDP+G LI RSTPGVE V WLFDPAVLVDDDGK YIYFGGGVP+GQ P T Sbjct: 993 DSPIGPWVDPLGRPLISRSTPGVEGVVWLFDPAVLVDDDGKAYIYFGGGVPQGQDQMPNT 1052 Query: 185 ARVMPLGEDMTSVVGTAKVIPAPFMFEDAGIHKWNGVYYYTYCSNFYDGERPEGSPPAGE 244 ARVM LG+DM SVVG+AK I APFMFED+GI+K NG+Y Y+YC+NFY G RP+GSPPAG Sbjct: 1053 ARVMQLGDDMISVVGSAKTIHAPFMFEDSGINKINGIYCYSYCTNFYGGSRPQGSPPAGV 1112 Query: 245 IAYMTSDHPMGPWTYHRTILKNPGHFFGVSGNNHHAVFQFHDSWYIAYHAQTLSKAQGIA 304 IAYM S +PMGPW Y IL NPG+FFGV GNNHH +F F WYI YHAQTL+K G A Sbjct: 1113 IAYMISKNPMGPWEYRGVILNNPGYFFGVGGNNHHQIFMFKGKWYITYHAQTLAKDMGAA 1172 Query: 305 NGYRSTHLNRLTHNEDGSIQEIHADYEGVQQLAALNPYERIPAATMGWSAGVKTEFLTAG 364 GYRS H+N + D I+E+ ADY+GV Q+ +PY + A T W AGV T+ A Sbjct: 1173 KGYRSPHINEVVIEGD-KIREVVADYKGVNQVKLFDPYRLVEAETFAWCAGVSTKKADAS 1231 Query: 365 GGQAVTDIERGGWIGLSGLDFG-SGAESFQASVLSLEAGGMLELHLDDPAGPIIGRLAVP 423 +TDI G WI LS +DFG +GA+ F+A V ++ ++E+ LD G I + V Sbjct: 1232 NNMCLTDINDGDWIALSKVDFGNAGAKKFEAIVNNVNGESLIEIKLDSLDGRTIAVVEVK 1291 Query: 424 -AADGTQEWVELKTEVQGAEGVHNLYLVFTGESDKSLFKLAAWQFTE 469 + +W +++T+V+ GVH+LY VF G+ LF + W+F + Sbjct: 1292 HQQEFLSKWTKVETKVEKVTGVHDLYFVFRGKKQNKLFDMDYWRFMK 1338 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.316 0.135 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,286,245,136 Number of extensions: 154335299 Number of successful extensions: 330047 Number of sequences better than 1.0e-05: 421 Number of HSP's gapped: 328614 Number of HSP's successfully gapped: 441 Length of query: 472 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 333 Effective length of database: 1,751,175,118 Effective search space: 583141314294 Effective search space used: 583141314294 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)