BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0210.0002.p
         (66 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q9KB73.1 Q9KB73_BACHD BH2055 protein                                   77   3e-13
C4ICS8.1 C4ICS8_CLOBU Glycoside hydrolase, family 31                   59   2e-07
B1R0C1.1 B1R0C1_CLOBU Glycosyl hydrolase                               59   2e-07
A7VNW9.1 A7VNW9_9CLOT Putative uncharacterized protein                 58   2e-07

>Q9KB73.1 Q9KB73_BACHD BH2055 protein
          Length = 657

 Score = 77.4 bits (189), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 34/62 (54%), Positives = 46/62 (74%)

Query: 1  MFREENGRLIREYDHERVWIEPWGEHSLRIRASYAEITDEQWALLPAVQTLSHISITKER 60
          MF+ +  RL+REYD E++WIEPWG+ +LR+RASY  I D  WALLP  +  + IS+T+E 
Sbjct: 1  MFKIDGSRLVREYDSEKLWIEPWGKDALRVRASYTAIEDTDWALLPVKEMEADISLTEET 60

Query: 61 AT 62
          AT
Sbjct: 61 AT 62


>C4ICS8.1 C4ICS8_CLOBU Glycoside hydrolase, family 31
          Length = 689

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/46 (54%), Positives = 38/46 (82%), Gaps = 1/46 (2%)

Query: 1  MFREENGRLIREYDHERVWIEPWGEHSLRIRASY-AEITDEQWALL 45
          MF +E  +LIR++D+E VWIEPWG++SLRIRA++  E+ + +WAL+
Sbjct: 1  MFLKERDKLIRKFDNETVWIEPWGDNSLRIRATFLPEMPNNKWALI 46


>B1R0C1.1 B1R0C1_CLOBU Glycosyl hydrolase
          Length = 689

 Score = 58.5 bits (140), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/46 (54%), Positives = 38/46 (82%), Gaps = 1/46 (2%)

Query: 1  MFREENGRLIREYDHERVWIEPWGEHSLRIRASY-AEITDEQWALL 45
          MF +E  +LIR++D+E VWIEPWG++SLRIRA++  E+ + +WAL+
Sbjct: 1  MFLKERDKLIRKFDNETVWIEPWGDNSLRIRATFLPEMPNNKWALI 46


>A7VNW9.1 A7VNW9_9CLOT Putative uncharacterized protein
          Length = 666

 Score = 58.2 bits (139), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 1/62 (1%)

Query: 1  MFREENGRLIREYDHERVWIEPWGEHSLRIRASY-AEITDEQWALLPAVQTLSHISITKE 59
          +F++E  RL   YD E +W+EPWG +SLR+RA+  AE+  E WALL A +  + I IT++
Sbjct: 3  VFQQEGNRLKYHYDAEELWLEPWGANSLRVRATKEAEMPKESWALLEAPECGAEIEITED 62

Query: 60 RA 61
           A
Sbjct: 63 GA 64


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.319    0.132    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 389,346,172
Number of extensions: 11777679
Number of successful extensions: 24927
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 24966
Number of HSP's successfully gapped: 4
Length of query: 66
Length of database: 3,060,696,203
Length adjustment: 38
Effective length of query: 28
Effective length of database: 2,702,697,633
Effective search space: 75675533724
Effective search space used: 75675533724
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 125 (52.8 bits)