BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0199.0014.p (291 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DJ19.1 B1DJ19_9BACL Phosphate ABC transporter, inner membrane ... 315 2e-84 Q5KUB3.1 Q5KUB3_GEOKA Phosphate ABC transporter (Permease) 282 3e-74 C3IZC8.1 C3IZC8_9BACI Phosphate ABC transporter, inner membrane ... 278 4e-73 B7Y763.1 B7Y763_9BACI Phosphate ABC transporter, inner membrane ... 278 4e-73 B7AZP2.1 B7AZP2_9FIRM Putative uncharacterized protein 233 1e-59 >B1DJ19.1 B1DJ19_9BACL Phosphate ABC transporter, inner membrane subunit PstA Length = 302 Score = 315 bits (808), Expect = 2e-84, Method: Compositional matrix adjust. Identities = 166/275 (60%), Positives = 199/275 (72%) Query: 15 NNKIANIAFYTLGALVMLLIFWLLFTILSKGLPSLRPDFLIKQPEEIDAGGGIGPVLXXX 74 NN++ I +T+G ++L I LLF IL GLP L +FL P EID GGGIGP L Sbjct: 24 NNRLFTILVWTVGIAIVLFILGLLFLILKDGLPKLSWNFLFGLPSEIDEGGGIGPALLNS 83 Query: 75 XXXXXXXXXXXXXXXXXXXXYMAEYAPDNRFTGALRICVESLSSVPSIVFGLLGLAIFAE 134 Y+AE+APDN+ +RICVE L+SVPSI+FGL G+A+F E Sbjct: 84 FYILFLSLAIAIPLGMAAGIYLAEFAPDNKLISFVRICVEGLASVPSIIFGLFGIALFVE 143 Query: 135 YFNVGLTILGGGVSLALLNLPMLARVTEEAVRAVPGEIREAGYALGMTKFHVIRKVVLPV 194 F +GLTILGG VSLA LNLP+L RVTEE++RAVP E++ A +ALG T I +V++P Sbjct: 144 MFQLGLTILGGAVSLAFLNLPVLTRVTEESIRAVPKELKNASFALGATHLQTIVRVLIPA 203 Query: 195 AMPAIVTGVCLVAGRAFGESAVIILTAGLSTSGEMWDFNLFSPGETLAVHLWYVQSEAIV 254 AM I+TG+CLVAGRAFGESAVIILTAG++TSGEMWDF+LFSPGETLAVHLWYVQSEAIV Sbjct: 204 AMNGIITGICLVAGRAFGESAVIILTAGVTTSGEMWDFSLFSPGETLAVHLWYVQSEAIV 263 Query: 255 EDARQIADKSAAVLVFVVLLINFMFRFPLWLGRRR 289 DA+ IA KSAAVLVF VLLIN +FR PLWL R+ Sbjct: 264 PDAQDIAQKSAAVLVFFVLLINLVFRIPLWLNSRK 298 >Q5KUB3.1 Q5KUB3_GEOKA Phosphate ABC transporter (Permease) Length = 298 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 148/266 (55%), Positives = 187/266 (70%) Query: 26 LGALVMLLIFWLLFTILSKGLPSLRPDFLIKQPEEIDAGGGIGPVLXXXXXXXXXXXXXX 85 + A V L+I LL+ I+ KGLP + FLI PEEIDAGGG+GP L Sbjct: 32 ISATVFLIILSLLYMIVRKGLPDIDIHFLIGLPEEIDAGGGVGPFLWNSIYILVLSLLLS 91 Query: 86 XXXXXXXXXYMAEYAPDNRFTGALRICVESLSSVPSIVFGLLGLAIFAEYFNVGLTILGG 145 ++AEYAP+NR +R +ESL+SVPSIVFGL G A+F EYF +G+TILG Sbjct: 92 LPIGIGAGIFLAEYAPNNRIMEWVRAAIESLASVPSIVFGLFGYALFVEYFQIGVTILGA 151 Query: 146 GVSLALLNLPMLARVTEEAVRAVPGEIREAGYALGMTKFHVIRKVVLPVAMPAIVTGVCL 205 ++LALLNLP+LARV+EEA+ AVP REA +ALG TK I K VLP AM I+TG+ L Sbjct: 152 SITLALLNLPVLARVSEEAITAVPSTWREASFALGATKAQTIVKTVLPAAMKGILTGISL 211 Query: 206 VAGRAFGESAVIILTAGLSTSGEMWDFNLFSPGETLAVHLWYVQSEAIVEDARQIADKSA 265 VA RAFGESA+I+L G S+SGEMWDF+L S G TL VHLWY+QSEA+V DA+QIA K++ Sbjct: 212 VACRAFGESAIILLVGGTSSSGEMWDFHLLSEGATLPVHLWYIQSEALVADAQQIAQKTS 271 Query: 266 AVLVFVVLLINFMFRFPLWLGRRRGR 291 A+LV +VL ++F+ RFPLWL +R+ R Sbjct: 272 ALLVLLVLFLSFIIRFPLWLSQRKKR 297 >C3IZC8.1 C3IZC8_9BACI Phosphate ABC transporter, inner membrane subunit PstA Length = 298 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 150/274 (54%), Positives = 187/274 (68%) Query: 16 NKIANIAFYTLGALVMLLIFWLLFTILSKGLPSLRPDFLIKQPEEIDAGGGIGPVLXXXX 75 NK+ + + + LI LL+TI+ KGLP++ FL+ PEEIDAGGG+GP L Sbjct: 22 NKLMLVLISVISLFIFFLILALLYTIVRKGLPNIDVHFLVGLPEEIDAGGGVGPFLWNSL 81 Query: 76 XXXXXXXXXXXXXXXXXXXYMAEYAPDNRFTGALRICVESLSSVPSIVFGLLGLAIFAEY 135 ++AEYAP RF +R +ESL+SVPSIVFGL G A+F EY Sbjct: 82 YILFLSLALSLPIGIGAGIFLAEYAPRTRFMEWVRGAIESLASVPSIVFGLFGYALFVEY 141 Query: 136 FNVGLTILGGGVSLALLNLPMLARVTEEAVRAVPGEIREAGYALGMTKFHVIRKVVLPVA 195 F +G+TILG V+LALLNLP+LARVTEEAV AVP REA +ALG TK I K VLP A Sbjct: 142 FQIGVTILGAAVTLALLNLPVLARVTEEAVTAVPSTWREASFALGATKTQTILKTVLPAA 201 Query: 196 MPAIVTGVCLVAGRAFGESAVIILTAGLSTSGEMWDFNLFSPGETLAVHLWYVQSEAIVE 255 I+TG+ LVA RAFGESA+I+L G STSGEMWDF+L S G TL VHLWY+QSEA+V Sbjct: 202 AKGIITGISLVACRAFGESAIILLVGGTSTSGEMWDFHLLSEGATLPVHLWYIQSEALVA 261 Query: 256 DARQIADKSAAVLVFVVLLINFMFRFPLWLGRRR 289 DA++IA K++A+LV +VLL++F R PLWL RR+ Sbjct: 262 DAQEIAQKTSALLVVIVLLLSFAVRVPLWLTRRK 295 >B7Y763.1 B7Y763_9BACI Phosphate ABC transporter, inner membrane subunit PstA Length = 298 Score = 278 bits (711), Expect = 4e-73, Method: Compositional matrix adjust. Identities = 150/274 (54%), Positives = 187/274 (68%) Query: 16 NKIANIAFYTLGALVMLLIFWLLFTILSKGLPSLRPDFLIKQPEEIDAGGGIGPVLXXXX 75 NK+ + + + LI LL+TI+ KGLP++ FL+ PEEIDAGGG+GP L Sbjct: 22 NKLMLVLISVISLFIFFLILALLYTIVRKGLPNIDVHFLVGLPEEIDAGGGVGPFLWNSL 81 Query: 76 XXXXXXXXXXXXXXXXXXXYMAEYAPDNRFTGALRICVESLSSVPSIVFGLLGLAIFAEY 135 ++AEYAP RF +R +ESL+SVPSIVFGL G A+F EY Sbjct: 82 YILFLSLALSLPIGIGAGIFLAEYAPRTRFMEWVRGAIESLASVPSIVFGLFGYALFVEY 141 Query: 136 FNVGLTILGGGVSLALLNLPMLARVTEEAVRAVPGEIREAGYALGMTKFHVIRKVVLPVA 195 F +G+TILG V+LALLNLP+LARVTEEAV AVP REA +ALG TK I K VLP A Sbjct: 142 FQIGVTILGAAVTLALLNLPVLARVTEEAVTAVPSTWREASFALGATKTQTILKTVLPAA 201 Query: 196 MPAIVTGVCLVAGRAFGESAVIILTAGLSTSGEMWDFNLFSPGETLAVHLWYVQSEAIVE 255 I+TG+ LVA RAFGESA+I+L G STSGEMWDF+L S G TL VHLWY+QSEA+V Sbjct: 202 AKGIITGISLVACRAFGESAIILLVGGTSTSGEMWDFHLLSEGATLPVHLWYIQSEALVA 261 Query: 256 DARQIADKSAAVLVFVVLLINFMFRFPLWLGRRR 289 DA++IA K++A+LV +VLL++F R PLWL RR+ Sbjct: 262 DAQEIAQKTSALLVVIVLLLSFAVRVPLWLTRRK 295 >B7AZP2.1 B7AZP2_9FIRM Putative uncharacterized protein Length = 283 Score = 233 bits (594), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 121/281 (43%), Positives = 171/281 (60%) Query: 11 RSQRNNKIANIAFYTLGALVMLLIFWLLFTILSKGLPSLRPDFLIKQPEEIDAGGGIGPV 70 ++ N++A + +G ++ L+ L +L KGLP L P F++ + +I AGGG+G Sbjct: 2 NTKVQNQLARTCLWLVGFFILGLLAAFLGYLLYKGLPVLSPHFILGKSSDIMAGGGVGSQ 61 Query: 71 LXXXXXXXXXXXXXXXXXXXXXXXYMAEYAPDNRFTGALRICVESLSSVPSIVFGLLGLA 130 L Y+AEYA +N+ T +R+ VESL++VPSIV GL G+ Sbjct: 62 LFNSFYMLFLSMAISIPIALGAGIYLAEYARENKLTKCIRLSVESLATVPSIVLGLFGMI 121 Query: 131 IFAEYFNVGLTILGGGVSLALLNLPMLARVTEEAVRAVPGEIREAGYALGMTKFHVIRKV 190 IF N+G +ILGG ++L LLNLPML RVTEE++R VP EA ALG TK I KV Sbjct: 122 IFVNMMNMGFSILGGSLTLVLLNLPMLVRVTEESIRTVPKSYEEASLALGATKLQTIFKV 181 Query: 191 VLPVAMPAIVTGVCLVAGRAFGESAVIILTAGLSTSGEMWDFNLFSPGETLAVHLWYVQS 250 VLP AMP I+TG+ L AGRA GE+A++I TAG + S M+D ++ + GETLAVHLWY+ S Sbjct: 182 VLPSAMPGIITGITLTAGRALGETAILIFTAGTTVSRHMFDTDVMAGGETLAVHLWYLMS 241 Query: 251 EAIVEDARQIADKSAAVLVFVVLLINFMFRFPLWLGRRRGR 291 +V D IA+ A+L+ V+L+ NF+ P+ L + + Sbjct: 242 TGLVPDRDAIANGIGALLILVILVFNFVLLLPVKLLSHKTK 282 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.327 0.142 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,526,752,539 Number of extensions: 55574189 Number of successful extensions: 242861 Number of sequences better than 1.0e-05: 3851 Number of HSP's gapped: 239621 Number of HSP's successfully gapped: 3869 Length of query: 291 Length of database: 3,060,696,203 Length adjustment: 134 Effective length of query: 157 Effective length of database: 1,798,280,193 Effective search space: 282329990301 Effective search space used: 282329990301 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 130 (54.7 bits)