BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0197.0013.p (684 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KC91.1 B3KC91_9BACI Putative uncharacterized protein 839 0.0 Q24TN9.1 Q24TN9_DESHY Putative uncharacterized protein 696 0.0 B6W4V6.1 B6W4V6_9BACE Putative uncharacterized protein 652 0.0 C3Q0V7.1 C3Q0V7_9BACE ATP-dependent DNA helicase replicase 649 0.0 C3R4J3.1 C3R4J3_9BACE ATP-dependent DNA helicase replicase 649 0.0 >B3KC91.1 B3KC91_9BACI Putative uncharacterized protein Length = 688 Score = 839 bits (2167), Expect = 0.0, Method: Compositional matrix adjust. Identities = 407/684 (59%), Positives = 508/684 (74%), Gaps = 1/684 (0%) Query: 2 IVNRSETDEKVYLQKVAARLQNALEAADRRIHSAGEEILAAKKYLWANSAQIDPAERAAN 61 ++N +E E+ YL V +LQ A E + ++ + ++I+ AKKYLW N AQ+D AERAAN Sbjct: 1 MLNPNENAEQEYLALVLKKLQRASEELEGKVSDSYKDIIEAKKYLWVNMAQLDAAERAAN 60 Query: 62 KVEISLSIDHGEQAVVKRDRLRKLLQTPYFGRVDF-LEDHHPEALACYIGVHAFAEEDSQ 120 +V+ISLSID GE+ + R+RKLL +PYFGRVDF + E A YIG H+F +SQ Sbjct: 61 RVDISLSIDTGEKQAARLQRMRKLLASPYFGRVDFRTNEPKEEEGAYYIGTHSFTNPESQ 120 Query: 121 ENVIYDWRSPIASMFYDFNTGKAGYSAPSGEVAGEITLKRQYSIKNSELEYMIESSMNIN 180 E++IYDWRSP+AS+FYD+N G A Y AP G + GEIT+KRQY IK+ ++EYMIESSMNIN Sbjct: 121 EHLIYDWRSPVASLFYDYNAGPASYEAPMGRLQGEITVKRQYKIKDGQMEYMIESSMNIN 180 Query: 181 DDVLQKELSQTSDEKMKNIVATIQKEQNVIIRNESAHELIIQGVAGSGKTSVALHRVAYL 240 DDVLQKELS SDEKMKNIVATIQ+EQN IIRNE+AHELIIQG AGSGKTSVALHRVA+L Sbjct: 181 DDVLQKELSSNSDEKMKNIVATIQQEQNAIIRNETAHELIIQGAAGSGKTSVALHRVAFL 240 Query: 241 LYRYKETLTSQNILIISPNKVFSDYISNVLPELGEEKIRELSFDELASAELAGICGFQTF 300 LYR+KETLTS N+LIISP+KVFSDYIS+VLPELGEEKI E++ +ELA+ EL G+C FQTF Sbjct: 241 LYRHKETLTSSNVLIISPHKVFSDYISSVLPELGEEKIMEVTMEELAAKELGGLCQFQTF 300 Query: 301 SQQVAELAGSVDDSVIERIGYKADMDFVHELDDYITYISEAYFIPAGIGVAQVQIPVEEV 360 S+QV E+ + D+ IERI YKA +DFVHELD Y+ Y +F P I + V IP EV Sbjct: 301 SEQVDEIVHAHDEQAIERIRYKAGLDFVHELDAYLEYGDRQFFQPMDIQMQGVLIPASEV 360 Query: 361 QSAYQSARSLPVRQRLEKTASILSGRARDENGRSLPSATANTIKTAVKKMFKSLNMLTLY 420 Y SLPVRQRLEKTAS+LSG+AR E+G L SA AN +K A++KMFK N L+LY Sbjct: 361 MDKYLGTMSLPVRQRLEKTASVLSGQARTEDGERLTSAEANKVKAAIRKMFKYQNALSLY 420 Query: 421 KDFYEHTGRPELFKPKKAKLLEFCDVFPLVYLKLRMEGTAGFDSVKHLLVDEMQDYTAIQ 480 K F+ + P+LF K + +E+ DVFP++YLK+ +EG+A +D VKHLLVDEMQDYT IQ Sbjct: 421 KAFFSYRNIPDLFIMKGRRTIEYADVFPMIYLKMHLEGSASYDMVKHLLVDEMQDYTPIQ 480 Query: 481 YRVLSLLFKCKKTILGDXXXXXXXXXXXXXXEIKQVFPGADTVELLKSYRSTLEIIHFAQ 540 Y V+S F CKKTILGD +I++VFP ADT+EL+KSYRSTLEI+ A+ Sbjct: 481 YAVISKWFACKKTILGDGNQSVNVYTSTSLPDIQRVFPQADTIELVKSYRSTLEIMKLAK 540 Query: 541 KINHNSRIVPVERHGEPPVIIGAETPEGELSEINRLIAGFRKSGHHSLGVVCKTQEQAQS 600 +I+ S ++PVERHGE P++I EL+ I F SG ++G++CKT QA+ Sbjct: 541 RIHPRSTMIPVERHGEEPLLIRRHDAAQELAFIQEHTRNFPNSGMQTMGIICKTSSQARQ 600 Query: 601 LYEVVKRVHKDIALLDFSSDRFHEGIMITSAHMAKGLEFDQVIIPFCDAVNYRTELDRNM 660 +YE VK + ++ LLDFSSDRF EGI IT AHMAKGLEFDQVI+PF A NYRTE+DR++ Sbjct: 601 VYESVKGLTDNVNLLDFSSDRFQEGITITFAHMAKGLEFDQVIVPFAGAANYRTEMDRSL 660 Query: 661 LYIACTRAMHGLALTFCGEASGWL 684 LYIACTRAMH L LT+ GE + WL Sbjct: 661 LYIACTRAMHKLLLTYSGEPAAWL 684 >Q24TN9.1 Q24TN9_DESHY Putative uncharacterized protein Length = 682 Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/684 (49%), Positives = 477/684 (69%), Gaps = 4/684 (0%) Query: 2 IVNRSETDEKVYLQKVAARLQNALEAADRRIHSAGEEILAAKKYLWANSAQIDPAERAAN 61 ++N+ E+DE+ +L V +L+ ALE I + EIL K+Y++ N +D AE+AAN Sbjct: 1 MLNQKESDERKHLSGVQRKLEAALEQMQATIENYSREILETKRYIYEN--HLDLAEKAAN 58 Query: 62 KVEISLSIDHGEQAVVKRDRLRKLLQTPYFGRVDFLEDHHPEALACYIGVHAFAEEDSQE 121 ++ + S+ GE+A+ +R +L+KL+Q+PYFGR+DF E + YIG+HAFA+ + Sbjct: 59 RIAVHDSVAFGEKAIKERGKLQKLIQSPYFGRIDFAETKGSKEETFYIGIHAFADPATAY 118 Query: 122 NVIYDWRSPIASMFYDFNTGKAGYSAPSGEVAGEITLKRQYSIKNSELEYMIESSMNIND 181 N+I+DWR+P++SMFYDF TG A Y AP+G++ G +TLKRQY I+++++EYMIESS+NI D Sbjct: 119 NIIFDWRAPVSSMFYDFETGPAFYEAPAGKIDGVLTLKRQYRIRHTQMEYMIESSLNIGD 178 Query: 182 DVLQKELSQTSDEKMKNIVATIQKEQNVIIRNESAHELIIQGVAGSGKTSVALHRVAYLL 241 ++LQKELS+ SD+KMKNIVATIQ+EQN IIRN+SA LIIQG AGSGKTS+ALHRVA+LL Sbjct: 179 EILQKELSRNSDDKMKNIVATIQREQNAIIRNDSAQVLIIQGAAGSGKTSIALHRVAFLL 238 Query: 242 YRYKETLTSQNILIISPNKVFSDYISNVLPELGEEKIRELSFDELASAELAGICGFQTFS 301 YR+KETLT++++LIISPNKVF +YISNVLPELGEE + E+SFD++A A L G +++FS Sbjct: 239 YRHKETLTAKDLLIISPNKVFGNYISNVLPELGEENMAEISFDDIA-AGLLGKYRYESFS 297 Query: 302 QQVAELAGSVDDSVIERIGYKADMDFVHELDDYITYISEAYFIPAGIGVAQVQIPVEEVQ 361 +QV L D I RI +KA FV +L Y+ E YF+P + + + E++ Sbjct: 298 EQVESLLEDEDAERIARIEFKATNLFVDQLQSYLEEADEHYFVPTDLALGSFGVAKEKLL 357 Query: 362 SAYQSARSLPVRQRLEKTASILSGRARDENGRSLPSATANTIKTAVKKMFKSLNMLTLYK 421 S Y++ + LPV++RL K A L + + G+ + +A + I+ V+KMF+ + L+LY+ Sbjct: 358 SEYRALQRLPVKKRLRKIADDLIEKYKRNTGKRMDAAVSRQIRDRVQKMFRFADTLSLYQ 417 Query: 422 DFYEHTGRPELFKPKKAKLLEFCDVFPLVYLKLRME-GTAGFDSVKHLLVDEMQDYTAIQ 480 +FY GR ++F + EFCDV+P +Y+KL E G + S+KHLLVDEMQDYT IQ Sbjct: 418 NFYHAIGREDMFCFSRKNTFEFCDVYPFIYVKLYFEGGEQDYKSIKHLLVDEMQDYTPIQ 477 Query: 481 YRVLSLLFKCKKTILGDXXXXXXXXXXXXXXEIKQVFPGADTVELLKSYRSTLEIIHFAQ 540 Y VL+ LF C TILGD +I+ F G +EL +SYRSTLEI FAQ Sbjct: 478 YAVLAKLFSCNMTILGDSYQRVNPYSSSSVEKIRPYFAGCHAMELCRSYRSTLEISGFAQ 537 Query: 541 KINHNSRIVPVERHGEPPVIIGAETPEGELSEINRLIAGFRKSGHHSLGVVCKTQEQAQS 600 KI N +++P+ERHG+ P I TP+ +L +I LI FR+SGH SLG++CK+Q+QA+ Sbjct: 538 KILENKKLIPIERHGQAPTITVCRTPKEQLDKIRHLIDQFRQSGHASLGIICKSQKQARL 597 Query: 601 LYEVVKRVHKDIALLDFSSDRFHEGIMITSAHMAKGLEFDQVIIPFCDAVNYRTELDRNM 660 L+E ++ + +ALL F S F +GI+ITS HMAKGLEFDQVI+P Y+T++DR++ Sbjct: 598 LFEQLRTAYDAMALLSFDSSEFQDGIVITSVHMAKGLEFDQVIVPDVADELYKTQMDRSL 657 Query: 661 LYIACTRAMHGLALTFCGEASGWL 684 LYIACTRAMH L LT CGE + +L Sbjct: 658 LYIACTRAMHQLDLTCCGEKTEFL 681 >B6W4V6.1 B6W4V6_9BACE Putative uncharacterized protein Length = 685 Score = 652 bits (1682), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/685 (47%), Positives = 449/685 (65%), Gaps = 2/685 (0%) Query: 1 MIVNRSETDEKVYLQKVAARLQNALEAADRRIHSAGEEILAAKKYLWANSAQIDPAERAA 60 MI N++E +EK YL + A L +E D+ I ++++ K YLW N +++D AE++A Sbjct: 1 MIFNQTEKEEKAYLMDIIALLAANIEQMDKAIEDKSKDVMEHKLYLWENLSELDRAEKSA 60 Query: 61 NKVEISLSIDHGEQAVVKRDRLRKLLQTPYFGRVDFLEDHHPEALACYIGVHAFAEEDSQ 120 + ++ + E V K+ R RK++ PYFGR+DF E PE L YIG+H+F + Sbjct: 61 VRQIVTQQVAASESLVEKKKRYRKMMAIPYFGRIDFQEKGQPEVLPLYIGIHSFFNPPTN 120 Query: 121 ENVIYDWRSPIASMFYDFNTGKAGYSAPSGEVAGEITLKRQYSIKNSELEYMIESSMNIN 180 EN+I+DWR+PI+SMFYD+ G+A + APSGEV G I LKRQY I++ ++E+M+ESS+NI Sbjct: 121 ENLIHDWRAPISSMFYDYELGEAHFDAPSGEVKGNIRLKRQYRIRDGKMEFMLESSLNIQ 180 Query: 181 DDVLQKELSQTSDEKMKNIVATIQKEQNVIIRNESAHELIIQGVAGSGKTSVALHRVAYL 240 DD+LQKELS SD++MKNIVATIQ+EQN IIRN++++ LIIQGVAGSGKTS+ALHRVAYL Sbjct: 181 DDILQKELSGNSDDRMKNIVATIQREQNKIIRNDTSNTLIIQGVAGSGKTSIALHRVAYL 240 Query: 241 LYRYKETLTSQNILIISPNKVFSDYISNVLPELGEEKIRELSFDELASAELAGICGFQTF 300 LYR+K +TS +ILIISPNKVF+DYISNVLPELGEEKI E F+EL L QTF Sbjct: 241 LYRHKGEITSNDILIISPNKVFADYISNVLPELGEEKIEECGFEELMLKILDNKYKIQTF 300 Query: 301 SQQVAELAGSVDDSVIERIGYKADMDFVHELDDYITYISEAYFIPAGIGVAQVQIPVEEV 360 +QVAE+ +++ IERI +K+ +F+ ++D YI Y+ + F P + ++ IP E + Sbjct: 301 FEQVAEILDKEEENFIERIRFKSTTEFIQQMDKYILYLEQNAFRPTDLKAGRIPIPAEYL 360 Query: 361 QSAYQSARSLPVRQRLEKTA-SILSGRARDENGRSLPSATANTIKTAVKKMFKSLNMLTL 419 + + + LP+R R + A I + + + +KKMF + + L L Sbjct: 361 KERFAAWHRLPMRSRFQPMAEEIARELTFTYHQEPMGKIQIRQLGNELKKMFNNKD-LDL 419 Query: 420 YKDFYEHTGRPELFKPKKAKLLEFCDVFPLVYLKLRMEGTAGFDSVKHLLVDEMQDYTAI 479 YK FY+ G+PE+FK K + LE+ DV PL+YLKL +E +KHLLVDEMQDYT I Sbjct: 420 YKGFYDWLGKPEMFKQGKNRKLEYADVAPLLYLKLALEDNKTMYGIKHLLVDEMQDYTPI 479 Query: 480 QYRVLSLLFKCKKTILGDXXXXXXXXXXXXXXEIKQVFPGADTVELLKSYRSTLEIIHFA 539 QY+VL+ LF C+KTILGD +I++V G++ ++L KSYRST EI FA Sbjct: 480 QYKVLAKLFPCRKTILGDAKQSVNPYSSTTCEQIQRVLVGSEVMKLCKSYRSTYEITEFA 539 Query: 540 QKINHNSRIVPVERHGEPPVIIGAETPEGELSEINRLIAGFRKSGHHSLGVVCKTQEQAQ 599 Q+I N + +ERHGE P + T + E+ I LI F K S+G++CKT +QA Sbjct: 540 QRIAKNEELEAIERHGEEPAVALLPTEKKEIEWIENLITSFLKGADVSMGIICKTVKQAD 599 Query: 600 SLYEVVKRVHKDIALLDFSSDRFHEGIMITSAHMAKGLEFDQVIIPFCDAVNYRTELDRN 659 LY + + I LL S F G++IT+AHMAKGLEFD+VI+PF +YRTE+DR+ Sbjct: 600 KLYAAINHLSDKICLLTEESVAFVNGVVITTAHMAKGLEFDEVIVPFVTDKDYRTEIDRS 659 Query: 660 MLYIACTRAMHGLALTFCGEASGWL 684 MLY+ACTRAMH L ++ G S +L Sbjct: 660 MLYVACTRAMHKLYISASGNISTFL 684 >C3Q0V7.1 C3Q0V7_9BACE ATP-dependent DNA helicase replicase Length = 685 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/685 (47%), Positives = 447/685 (65%), Gaps = 2/685 (0%) Query: 1 MIVNRSETDEKVYLQKVAARLQNALEAADRRIHSAGEEILAAKKYLWANSAQIDPAERAA 60 MI N++E +EK YL + A L +E D+ I ++++ K YLW N +++D AE++A Sbjct: 1 MIFNQTEKEEKAYLMDIIALLAANIEQMDKAIEDKSKDVMEHKLYLWENLSELDRAEKSA 60 Query: 61 NKVEISLSIDHGEQAVVKRDRLRKLLQTPYFGRVDFLEDHHPEALACYIGVHAFAEEDSQ 120 + ++ + E K+ R RK++ PYFGR+DF E PE L YIG+H+F + Sbjct: 61 VRQIVTQQVAASESLAEKKKRYRKMMAIPYFGRIDFQEKGQPEVLPLYIGIHSFFNPPTN 120 Query: 121 ENVIYDWRSPIASMFYDFNTGKAGYSAPSGEVAGEITLKRQYSIKNSELEYMIESSMNIN 180 EN+I+DWR+PI+SMFYD+ G+A + APSGEV G I LKRQY I++ ++E+M+ESS+NI Sbjct: 121 ENLIHDWRAPISSMFYDYELGEAHFDAPSGEVKGNIRLKRQYRIRDGKMEFMLESSLNIQ 180 Query: 181 DDVLQKELSQTSDEKMKNIVATIQKEQNVIIRNESAHELIIQGVAGSGKTSVALHRVAYL 240 DD+LQKELS SD++MKNIVATIQ+EQN IIRN++++ LIIQGVAGSGKTS+ALHRVAYL Sbjct: 181 DDILQKELSGNSDDRMKNIVATIQREQNKIIRNDTSNTLIIQGVAGSGKTSIALHRVAYL 240 Query: 241 LYRYKETLTSQNILIISPNKVFSDYISNVLPELGEEKIRELSFDELASAELAGICGFQTF 300 LYR+K +TS +ILIISPNKVF+DYISNVLPELGEEKI E F+EL L QTF Sbjct: 241 LYRHKGEITSNDILIISPNKVFADYISNVLPELGEEKIEECGFEELMLKILDNKYKIQTF 300 Query: 301 SQQVAELAGSVDDSVIERIGYKADMDFVHELDDYITYISEAYFIPAGIGVAQVQIPVEEV 360 QVAE+ +++ IERI +K+ +F+ ++D YI Y+ + F P + ++ IP E + Sbjct: 301 FDQVAEILDKEEENFIERIRFKSTTEFIQQMDKYILYLEQNAFRPTDLKAGRIPIPAEYL 360 Query: 361 QSAYQSARSLPVRQRLEKTA-SILSGRARDENGRSLPSATANTIKTAVKKMFKSLNMLTL 419 + + + LP+R R + A I + + + +KKMF + + L L Sbjct: 361 KKRFAAWHRLPMRSRFQPMAEEIARELTFTYHQEPMGKIQIRQLGNELKKMFNNKD-LDL 419 Query: 420 YKDFYEHTGRPELFKPKKAKLLEFCDVFPLVYLKLRMEGTAGFDSVKHLLVDEMQDYTAI 479 YK FY+ G+PE+FK K + LE+ DV PL+YLKL +E +KHLLVDEMQDYT I Sbjct: 420 YKGFYDWLGKPEMFKQGKNRKLEYADVAPLLYLKLALEDNKTMYGIKHLLVDEMQDYTPI 479 Query: 480 QYRVLSLLFKCKKTILGDXXXXXXXXXXXXXXEIKQVFPGADTVELLKSYRSTLEIIHFA 539 QY+VL+ LF C+KTILGD +I+++ G++ ++L KSYRST EI FA Sbjct: 480 QYKVLAKLFPCRKTILGDAKQSVNPYSSTTCEQIQRLLVGSEVMKLCKSYRSTYEITEFA 539 Query: 540 QKINHNSRIVPVERHGEPPVIIGAETPEGELSEINRLIAGFRKSGHHSLGVVCKTQEQAQ 599 Q+I N + +ERHGE P + T + E+ I LI F K S+G++CKT +QA Sbjct: 540 QRIAKNEELEAIERHGEEPAVALLPTEKKEIEWIENLITSFLKGADVSMGIICKTVKQAD 599 Query: 600 SLYEVVKRVHKDIALLDFSSDRFHEGIMITSAHMAKGLEFDQVIIPFCDAVNYRTELDRN 659 LY + + I LL S F G++IT+AHMAKGLEFD+VI+PF +YRTE+DR+ Sbjct: 600 KLYAAINHLSDKICLLTEESVAFVNGVVITTAHMAKGLEFDEVIVPFVTDKDYRTEIDRS 659 Query: 660 MLYIACTRAMHGLALTFCGEASGWL 684 MLY+ACTRAMH L ++ G S +L Sbjct: 660 MLYVACTRAMHKLYISASGNISTFL 684 >C3R4J3.1 C3R4J3_9BACE ATP-dependent DNA helicase replicase Length = 686 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 325/683 (47%), Positives = 447/683 (65%), Gaps = 5/683 (0%) Query: 1 MIVNRSETDEKVYLQKVAARLQNALEAADRRIHSAGEEILAAKKYLWANSAQIDPAERAA 60 MI N++E +EK YL + A L +E D+ I ++++ K YLW N +++D AE++A Sbjct: 1 MIFNQTEKEEKAYLMDIIALLAANIEQMDKAIEDKSKDVMEHKLYLWENLSELDRAEKSA 60 Query: 61 NKVEISLSIDHGEQAVVKRDRLRKLLQTPYFGRVDFLEDHHPEALACYIGVHAFAEEDSQ 120 + ++ + E V K+ R RK++ PYFGR+DF E PE L YIG+H+F + Sbjct: 61 VRQIVTQQVAASESLVEKKKRYRKMMAIPYFGRIDFQEKGQPEVLPLYIGIHSFFNPPTN 120 Query: 121 ENVIYDWRSPIASMFYDFNTGKAGYSAPSGEVAGEITLKRQYSIKNSELEYMIESSMNIN 180 EN+I+DWR+PI+SMFYD+ G+A + APSGEV G I LKRQY I++ ++E+M+ESS+NI Sbjct: 121 ENLIHDWRAPISSMFYDYELGEAHFDAPSGEVKGNIRLKRQYRIRDGKMEFMLESSLNIQ 180 Query: 181 DDVLQKELSQTSDEKMKNIVATIQKEQNVIIRNESAHELIIQGVAGSGKTSVALHRVAYL 240 DD+LQKELS SD++MKNIVATIQ+EQN IIRN++++ LIIQGVAGSGKTS+ALHRVAYL Sbjct: 181 DDILQKELSGNSDDRMKNIVATIQREQNKIIRNDTSNTLIIQGVAGSGKTSIALHRVAYL 240 Query: 241 LYRYKETLTSQNILIISPNKVFSDYISNVLPELGEEKIRELSFDELASAELAGICGFQTF 300 LYR+K +TS +ILIISPNKVF+DYISNVLPELGEEKI E F+EL L QTF Sbjct: 241 LYRHKGEITSNDILIISPNKVFADYISNVLPELGEEKIEECGFEELMLKILDNKYKIQTF 300 Query: 301 SQQVAELAGSVDDSVIERIGYKADMDFVHELDDYITYISEAYFIPAGIGVAQVQIPVEEV 360 +QVAE+ +++ IERI +K+ +F+ ++D YI Y+ + F P + ++ IP E + Sbjct: 301 FEQVAEILDKEEENFIERIRFKSTTEFIQQMDKYILYLEQNAFRPTDLKAGRIPIPAEYL 360 Query: 361 QSAYQSARSLPVRQRLEKTA-SILSGRARDENGRSLPSATANTIKTAVKKMFKSLNMLTL 419 + + + LP+R R + A I + + + +KKMF + + L L Sbjct: 361 KERFAAWHRLPMRSRFQPMAEEIARELTFTYHQEPMGKIQIRQLGNELKKMFNNKD-LDL 419 Query: 420 YKDFYEHTGRPELFKPKKAKLLEFCDVFPLVYLKLRMEGTAGFDSVKHLLVDEMQDYTAI 479 YK FY+ G+PE+FK K + LE+ DV PL+YLKL +E +KHLLVDEMQDYT I Sbjct: 420 YKGFYDWLGKPEMFKQGKNRKLEYADVAPLLYLKLALEDNKTMYGIKHLLVDEMQDYTPI 479 Query: 480 QYRVLSLLFKCKKTILGDXXXXXXXXXXXXXXEIKQVFPGADTVELLKSYRSTLEIIHFA 539 QY+VL+ LF C+KTILGD +I++V G++ ++L KSYRST EI FA Sbjct: 480 QYKVLAKLFPCRKTILGDAKQSVNPYSSTTCEQIQRVLVGSEVMKLCKSYRSTYEITEFA 539 Query: 540 QKINHNSRIVPVERHGEPPVIIGAETPEGELSEINRLIAGFRKSGHHSLGVVCKTQEQAQ 599 Q+I N + +ERHGE P + T + E+ I LI F K S+G++CKT +QA Sbjct: 540 QRIAKNEELEAIERHGEEPAVALLPTEKKEIEWIENLITSFLKGADVSMGIICKTVKQAD 599 Query: 600 SLYEVVKRVHKDIALLDFSSDRFHEGIMITSAHMAKGLEFDQVIIPFCDAVNYRTELDRN 659 LY + + I LL S F G++IT+AHMAKGLEFD+VI+PF +YRTE+DR+ Sbjct: 600 KLYAAINHLSDKICLLTEESVAFVNGVVITTAHMAKGLEFDEVIVPFVTDKDYRTEIDRS 659 Query: 660 MLYIACTRAMHGLALTFCGEASG 682 MLY+ACTRAMH L + ASG Sbjct: 660 MLYVACTRAMHKL---YISSASG 679 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,683,597,559 Number of extensions: 146404319 Number of successful extensions: 453219 Number of sequences better than 1.0e-05: 594 Number of HSP's gapped: 451699 Number of HSP's successfully gapped: 841 Length of query: 684 Length of database: 3,060,696,203 Length adjustment: 143 Effective length of query: 541 Effective length of database: 1,713,491,058 Effective search space: 926998662378 Effective search space used: 926998662378 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 135 (56.6 bits)