BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0197.0011.p
         (145 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6LZQ9.1 A6LZQ9_CLOB8 Putative uncharacterized protein                 87   4e-16

>A6LZQ9.1 A6LZQ9_CLOB8 Putative uncharacterized protein
          Length = 144

 Score = 87.4 bits (215), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 83/139 (59%), Gaps = 3/139 (2%)

Query: 5   KFVSHL---VKDWFAVCGCVTILVAIVQFLSSTGSVKASILWQIIVAASAFTCFKYALVS 61
           KF+ +L   +KD+F   G + IL+  +  + S  +++ S L+QI++ + A+  FK A ++
Sbjct: 2   KFIGYLKNSLKDFFISSGFLMILITTISAIYSKETIETSQLFQIMLFSLAYVFFKLAFIN 61

Query: 62  TPGLGKKAQTICFYICFLLADVFVIVWLWLFSSGPFRENERFLPFLITSLVIKGMVCTML 121
              + KK + I F +   L+++ +++WL  FS G        L ++   +++K +V TM+
Sbjct: 62  KNDINKKVRLITFNVFLTLSELMILLWLLFFSPGKVMNINLLLAYIFALVIVKFLVYTMM 121

Query: 122 HIDGQKEAKRLNEKLGEYQ 140
            I+G+KEAK +NEKL +Y+
Sbjct: 122 SINGEKEAKLINEKLIKYK 140


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.329    0.141    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 823,396,578
Number of extensions: 27634054
Number of successful extensions: 89497
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 89497
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 3,060,696,203
Length adjustment: 108
Effective length of query: 37
Effective length of database: 2,043,226,583
Effective search space: 75599383571
Effective search space used: 75599383571
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 125 (52.8 bits)