BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0197.0001.p (475 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3FJT9.1 C3FJT9_BACTB Monoxygenase 624 e-177 C3DBZ9.1 C3DBZ9_BACTU Monoxygenase 624 e-177 B0RM48.1 B0RM48_XANCB Oxidoreductase EC=1.-.-.- 551 e-155 Q8PDQ6.1 Q8PDQ6_XANCP Monoxygenase 547 e-154 Q4UZZ8.1 Q4UZZ8_XANC8 Monoxygenase 547 e-154 >C3FJT9.1 C3FJT9_BACTB Monoxygenase Length = 475 Score = 624 bits (1610), Expect = e-177, Method: Compositional matrix adjust. Identities = 294/468 (62%), Positives = 360/468 (76%), Gaps = 1/468 (0%) Query: 2 MSLEALNERVVTDLSYLAYGGADWVRPLSHPEGHVYDVVIVXXXXXXXXXXXXXXRERIS 61 MSLEALNE+V DLSYLA+GG DWV P HPEGHVYD VI+ RERIS Sbjct: 1 MSLEALNEQVKRDLSYLAFGGEDWVCPTPHPEGHVYDTVIIGGGQCGLGVAFGLLRERIS 60 Query: 62 NILVIDENSEGAEGPWETYARMVTLRTPKHLTSVDLGIPSLTFRSWWEAQNGAEGWEAID 121 NIL+IDEN EG EGPW TYARM+TLRTPKHL S+DLG+PSLTFRSWWEAQ G + WE +D Sbjct: 61 NILIIDENVEGYEGPWVTYARMMTLRTPKHLISIDLGVPSLTFRSWWEAQFGPKSWEDLD 120 Query: 122 KIPRGEWMNYLRWYRRVLGLPVINEVQLKLIEPCEKGIHRLHISGAGAPAGQLLARKVVL 181 KIPR +WMNYLRWYR+VL LPV+NEV++KLIEP + ++RLHI GAGA + LLARKV+L Sbjct: 121 KIPRNDWMNYLRWYRKVLNLPVVNEVKMKLIEPAGEDVYRLHIEGAGASSNTLLARKVIL 180 Query: 182 ATGIQGGGEWYVPPMVADHLPKALYAHTSEAIDCNSLRGKRIAVLGGGASAFDNANFLLT 241 A GIQGGGEW+VP M+++ LP+ LYAHTSE I+ +L+ K++A+LGGGASAFDNANF L+ Sbjct: 181 ANGIQGGGEWHVPSMISEILPRHLYAHTSEDIEFEALKDKKVAILGGGASAFDNANFALS 240 Query: 242 EGAAEAHVFVRREQLPNINPIRQMEVSGMIERFHTLPDSDKYAVISHFFKTNQPPTNDTF 301 EG AHVFVRR ++P INPIRQM V+G+IERFH L D+DKY+V++H+FK +QPPTNDTF Sbjct: 241 EGVGTAHVFVRRTKMPRINPIRQMGVAGLIERFHVLSDADKYSVMAHYFK-HQPPTNDTF 299 Query: 302 ARAAAWPGFQLHLGSPWLKVEAIGDKAVVTTPKGECSFDFLVVSTGLLSDPGLRPELRLV 361 RAA+ PGF+LHLGSPWL V+ DKAVVTTP+G +FDFL++STGL++D LRPEL+L Sbjct: 300 ERAASHPGFKLHLGSPWLDVQHEADKAVVTTPQGNFTFDFLIISTGLVTDHSLRPELKLF 359 Query: 362 DGHIARWSDRYEAPPGLANPLLDAHPYLSPGFALQSRDEAGRALVHGLFVFNYXXXXXXX 421 + HIARW D Y+AP +AN LDA+PYL PGF RD+ L+HGLF FNY Sbjct: 360 EPHIARWDDYYKAPAEIANHKLDAYPYLGPGFTFTCRDKKDTKLLHGLFAFNYSAVVSCG 419 Query: 422 XXXXXXXXMKNAVPKLVAGVADQLFTDDREAILNAFFTYDEVEFTGVW 469 M+ +PKLV+ VADQLF+D+RE IL F++Y++ EF G W Sbjct: 420 ISASSLPGMRYGIPKLVSAVADQLFSDNREEILKNFYSYNDAEFVGEW 467 >C3DBZ9.1 C3DBZ9_BACTU Monoxygenase Length = 475 Score = 624 bits (1610), Expect = e-177, Method: Compositional matrix adjust. Identities = 294/468 (62%), Positives = 360/468 (76%), Gaps = 1/468 (0%) Query: 2 MSLEALNERVVTDLSYLAYGGADWVRPLSHPEGHVYDVVIVXXXXXXXXXXXXXXRERIS 61 MSLEALNE+V DLSYLA+GG DWV P HPEGHVYD VI+ RERIS Sbjct: 1 MSLEALNEQVKRDLSYLAFGGEDWVCPTPHPEGHVYDTVIIGGGQCGLGVAFGLLRERIS 60 Query: 62 NILVIDENSEGAEGPWETYARMVTLRTPKHLTSVDLGIPSLTFRSWWEAQNGAEGWEAID 121 NIL+IDEN EG EGPW TYARM+TLRTPKHL S+DLG+PSLTFRSWWEAQ G + WE +D Sbjct: 61 NILIIDENVEGYEGPWVTYARMMTLRTPKHLISIDLGVPSLTFRSWWEAQFGPKSWEDLD 120 Query: 122 KIPRGEWMNYLRWYRRVLGLPVINEVQLKLIEPCEKGIHRLHISGAGAPAGQLLARKVVL 181 KIPR +WMNYLRWYR+VL LPV+NEV++KLIEP + ++RLHI GAGA + LLARKV+L Sbjct: 121 KIPRNDWMNYLRWYRKVLNLPVVNEVKMKLIEPAGEDVYRLHIEGAGASSNTLLARKVIL 180 Query: 182 ATGIQGGGEWYVPPMVADHLPKALYAHTSEAIDCNSLRGKRIAVLGGGASAFDNANFLLT 241 A GIQGGGEW+VP M+++ LP+ LYAHTSE I+ +L+ K++A+LGGGASAFDNANF L+ Sbjct: 181 ANGIQGGGEWHVPSMISEILPRHLYAHTSEDIEFEALKDKKVAILGGGASAFDNANFALS 240 Query: 242 EGAAEAHVFVRREQLPNINPIRQMEVSGMIERFHTLPDSDKYAVISHFFKTNQPPTNDTF 301 EG AHVFVRR ++P INPIRQM V+G+IERFH L D+DKY+V++H+FK +QPPTNDTF Sbjct: 241 EGVGTAHVFVRRTKMPRINPIRQMGVAGLIERFHVLSDADKYSVMAHYFK-HQPPTNDTF 299 Query: 302 ARAAAWPGFQLHLGSPWLKVEAIGDKAVVTTPKGECSFDFLVVSTGLLSDPGLRPELRLV 361 RAA+ PGF+LHLGSPWL V+ DKAVVTTP+G +FDFL++STGL++D LRPEL+L Sbjct: 300 ERAASHPGFKLHLGSPWLDVQHEADKAVVTTPQGNFTFDFLIISTGLVTDHSLRPELKLF 359 Query: 362 DGHIARWSDRYEAPPGLANPLLDAHPYLSPGFALQSRDEAGRALVHGLFVFNYXXXXXXX 421 + HIARW D Y+AP +AN LDA+PYL PGF RD+ L+HGLF FNY Sbjct: 360 EPHIARWDDYYKAPAEIANHKLDAYPYLGPGFTFTCRDKKDTKLLHGLFAFNYSAVVSCG 419 Query: 422 XXXXXXXXMKNAVPKLVAGVADQLFTDDREAILNAFFTYDEVEFTGVW 469 M+ +PKLV+ VADQLF+D+RE IL F++Y++ EF G W Sbjct: 420 ISASSLPGMRYGIPKLVSAVADQLFSDNREEILKNFYSYNDAEFVGEW 467 >B0RM48.1 B0RM48_XANCB Oxidoreductase EC=1.-.-.- Length = 473 Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust. Identities = 275/473 (58%), Positives = 324/473 (68%), Gaps = 5/473 (1%) Query: 2 MSLEALNERVVTDLSYLAYGGADWVRPLSHPEGHVYDVVIVXXXXXXXXXXXXXXRERIS 61 MSL L + DL LA+GG WVRP HP GHVYDVVIV RER+ Sbjct: 1 MSLAQLEHALQHDLQRLAHGGEPWVRPRVHPAGHVYDVVIVGAGQSGLGAAFALQRERVH 60 Query: 62 NILVIDENSEGAEGPWETYARMVTLRTPKHLTSVDLGIPSLTFRSWWEAQNGAEGWEAID 121 N+LVIDEN G EGPW TYARM TLRTPK +TS+DLG+P+LTFR+WWEAQ+GA GW+A+D Sbjct: 61 NVLVIDENPPGQEGPWVTYARMQTLRTPKQITSIDLGVPTLTFRAWWEAQHGAAGWDALD 120 Query: 122 KIPRGEWMNYLRWYRRVLGLPVINEVQLKLIEP-CEKGIHRLHISGAGAPAGQLLARKVV 180 KIPRG WM+YLRWYR L LPV N QL IEP GIHRLH++ GAP L+ARK++ Sbjct: 121 KIPRGTWMDYLRWYRAALRLPVRNATQLVRIEPDAAPGIHRLHLA-MGAP---LMARKII 176 Query: 181 LATGIQGGGEWYVPPMVADHLPKALYAHTSEAIDCNSLRGKRIAVLGGGASAFDNANFLL 240 LATGIQGGG+W VP + LP YAHTS ID +L GKR+ +LGGGASAFDNA F L Sbjct: 177 LATGIQGGGQWQVPEWITQALPAQRYAHTSGPIDYAALAGKRVGILGGGASAFDNACFAL 236 Query: 241 TEGAAEAHVFVRREQLPNINPIRQMEVSGMIERFHTLPDSDKYAVISHFFKTNQPPTNDT 300 +G A A VFVRR LP +NPIR ME +G+I RF LPD+DKY +++ FF NQPPTNDT Sbjct: 237 DQGVARAEVFVRRAALPRVNPIRHMEQAGIIPRFAALPDADKYRMMASFFGRNQPPTNDT 296 Query: 301 FARAAAWPGFQLHLGSPWLKVEAIGDKAVVTTPKGECSFDFLVVSTGLLSDPGLRPELRL 360 F RA A GF LHL +PWL VE D VV TP+GE FDFL ++TGL++DP LRPEL Sbjct: 297 FQRACAHAGFALHLDAPWLGVEEHNDVVVVRTPQGEHRFDFLAIATGLVTDPRLRPELAA 356 Query: 361 VDGHIARWSDRYEAPPGLANPLLDAHPYLSPGFALQSRDEAGRALVHGLFVFNYXXXXXX 420 + G IA W+DRY+APPG ANP+LDAHPYL PGF L R A VHGLF FNY Sbjct: 357 LSGRIACWADRYQAPPGQANPVLDAHPYLGPGFELLPRTPDDAAAVHGLFAFNYSALINH 416 Query: 421 XXXXXXXXXMKNAVPKLVAGVADQLFTDDREAILNAFFTYDEVEFTGVWPLKT 473 +K A+P+L VADQLF DDR+A++ A+ YD+ EF G WP T Sbjct: 417 GLSAAALSGLKVALPRLARAVADQLFLDDRQAMVEAYLGYDQAEFVGQWPQPT 469 >Q8PDQ6.1 Q8PDQ6_XANCP Monoxygenase Length = 473 Score = 547 bits (1410), Expect = e-154, Method: Compositional matrix adjust. Identities = 274/473 (57%), Positives = 323/473 (68%), Gaps = 5/473 (1%) Query: 2 MSLEALNERVVTDLSYLAYGGADWVRPLSHPEGHVYDVVIVXXXXXXXXXXXXXXRERIS 61 MSL L + DL LA+GG WVRP HP GHVYDVVIV RER+ Sbjct: 1 MSLAQLEHALQHDLQRLAHGGEPWVRPRVHPAGHVYDVVIVGAGQSGLGAAFALQRERVH 60 Query: 62 NILVIDENSEGAEGPWETYARMVTLRTPKHLTSVDLGIPSLTFRSWWEAQNGAEGWEAID 121 N+LVIDEN G EGPW TYARM TLRTPK +TS+DLG+P+LTFR+WWEAQ+GA GW+A+D Sbjct: 61 NVLVIDENPPGQEGPWVTYARMQTLRTPKQITSIDLGVPTLTFRAWWEAQHGAAGWDALD 120 Query: 122 KIPRGEWMNYLRWYRRVLGLPVINEVQLKLIEP-CEKGIHRLHISGAGAPAGQLLARKVV 180 KIPRG WM+YLRWYR L LPV N QL IEP GIHRLH++ GAP L+ARK++ Sbjct: 121 KIPRGTWMDYLRWYRAALRLPVRNATQLVRIEPDAAPGIHRLHLA-MGAP---LMARKII 176 Query: 181 LATGIQGGGEWYVPPMVADHLPKALYAHTSEAIDCNSLRGKRIAVLGGGASAFDNANFLL 240 LATGIQGGG+W VP + LP YAHTS ID +L GKR+ +LGGGASAFDNA F L Sbjct: 177 LATGIQGGGQWQVPEWITQALPAQRYAHTSGPIDYAALAGKRVGILGGGASAFDNACFAL 236 Query: 241 TEGAAEAHVFVRREQLPNINPIRQMEVSGMIERFHTLPDSDKYAVISHFFKTNQPPTNDT 300 +G A A VFVRR LP +NPIR ME +G+I RF LPD+DKY +++ FF NQPPTNDT Sbjct: 237 DQGVARAEVFVRRAALPRVNPIRHMEQAGIIPRFAALPDADKYRMMASFFGRNQPPTNDT 296 Query: 301 FARAAAWPGFQLHLGSPWLKVEAIGDKAVVTTPKGECSFDFLVVSTGLLSDPGLRPELRL 360 F RA A GF LHL +PWL VE D VV TP+GE FDFL ++TGL++DP LRPEL Sbjct: 297 FQRACAHAGFALHLDAPWLGVEEHNDVVVVRTPQGEHRFDFLAIATGLVTDPRLRPELAA 356 Query: 361 VDGHIARWSDRYEAPPGLANPLLDAHPYLSPGFALQSRDEAGRALVHGLFVFNYXXXXXX 420 + G IA W+DRY+APPG ANP+LDAHPYL PGF L R A V GLF FNY Sbjct: 357 LSGRIACWADRYQAPPGQANPVLDAHPYLGPGFELLPRTPDDAAAVDGLFAFNYSALINH 416 Query: 421 XXXXXXXXXMKNAVPKLVAGVADQLFTDDREAILNAFFTYDEVEFTGVWPLKT 473 +K A+P+L VADQLF DDR+A++ A+ YD+ EF G WP T Sbjct: 417 GLSAAALSGLKVALPRLARAVADQLFLDDRQAMVEAYLGYDQAEFVGQWPQPT 469 >Q4UZZ8.1 Q4UZZ8_XANC8 Monoxygenase Length = 473 Score = 547 bits (1410), Expect = e-154, Method: Compositional matrix adjust. Identities = 274/473 (57%), Positives = 323/473 (68%), Gaps = 5/473 (1%) Query: 2 MSLEALNERVVTDLSYLAYGGADWVRPLSHPEGHVYDVVIVXXXXXXXXXXXXXXRERIS 61 MSL L + DL LA+GG WVRP HP GHVYDVVIV RER+ Sbjct: 1 MSLAQLEHALQHDLQRLAHGGEPWVRPRVHPAGHVYDVVIVGAGQSGLGAAFALQRERVH 60 Query: 62 NILVIDENSEGAEGPWETYARMVTLRTPKHLTSVDLGIPSLTFRSWWEAQNGAEGWEAID 121 N+LVIDEN G EGPW TYARM TLRTPK +TS+DLG+P+LTFR+WWEAQ+GA GW+A+D Sbjct: 61 NVLVIDENPPGQEGPWVTYARMQTLRTPKQITSIDLGVPTLTFRAWWEAQHGAAGWDALD 120 Query: 122 KIPRGEWMNYLRWYRRVLGLPVINEVQLKLIEP-CEKGIHRLHISGAGAPAGQLLARKVV 180 KIPRG WM+YLRWYR L LPV N QL IEP GIHRLH++ GAP L+ARK++ Sbjct: 121 KIPRGTWMDYLRWYRAALRLPVRNATQLVRIEPDAAPGIHRLHLA-MGAP---LMARKII 176 Query: 181 LATGIQGGGEWYVPPMVADHLPKALYAHTSEAIDCNSLRGKRIAVLGGGASAFDNANFLL 240 LATGIQGGG+W VP + LP YAHTS ID +L GKR+ +LGGGASAFDNA F L Sbjct: 177 LATGIQGGGQWQVPEWITQALPAQRYAHTSGPIDYAALAGKRVGILGGGASAFDNACFAL 236 Query: 241 TEGAAEAHVFVRREQLPNINPIRQMEVSGMIERFHTLPDSDKYAVISHFFKTNQPPTNDT 300 +G A A VFVRR LP +NPIR ME +G+I RF LPD+DKY +++ FF NQPPTNDT Sbjct: 237 DQGVARAEVFVRRAALPRVNPIRHMEQAGIIPRFAALPDADKYRMMASFFGRNQPPTNDT 296 Query: 301 FARAAAWPGFQLHLGSPWLKVEAIGDKAVVTTPKGECSFDFLVVSTGLLSDPGLRPELRL 360 F RA A GF LHL +PWL VE D VV TP+GE FDFL ++TGL++DP LRPEL Sbjct: 297 FQRACAHAGFALHLDAPWLGVEEHNDVVVVRTPQGEHRFDFLAIATGLVTDPRLRPELAA 356 Query: 361 VDGHIARWSDRYEAPPGLANPLLDAHPYLSPGFALQSRDEAGRALVHGLFVFNYXXXXXX 420 + G IA W+DRY+APPG ANP+LDAHPYL PGF L R A V GLF FNY Sbjct: 357 LSGRIACWADRYQAPPGQANPVLDAHPYLGPGFELLPRTPDDAAAVDGLFAFNYSALINH 416 Query: 421 XXXXXXXXXMKNAVPKLVAGVADQLFTDDREAILNAFFTYDEVEFTGVWPLKT 473 +K A+P+L VADQLF DDR+A++ A+ YD+ EF G WP T Sbjct: 417 GLSAAALSGLKVALPRLARAVADQLFLDDRQAMVEAYLGYDQAEFVGQWPQPT 469 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.432 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,932,158,434 Number of extensions: 126195242 Number of successful extensions: 260489 Number of sequences better than 1.0e-05: 88 Number of HSP's gapped: 260278 Number of HSP's successfully gapped: 88 Length of query: 475 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 335 Effective length of database: 1,741,754,103 Effective search space: 583487624505 Effective search space used: 583487624505 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)