BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0196.0004.p (408 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KCZ7.1 B3KCZ7_9BACI Aminotransferase class I and II 512 e-143 B1D7C1.1 B1D7C1_9BACL Aminotransferase class I and II 473 e-131 Q24W68.1 Q24W68_DESHY Putative uncharacterized protein 368 e-100 C0ZL17.1 C0ZL17_BREBN Probable aminotransferase EC=2.6.1.- 366 3e-99 B8G060.1 B8G060_DESHD Aminotransferase class I and II 363 1e-98 >B3KCZ7.1 B3KCZ7_9BACI Aminotransferase class I and II Length = 412 Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust. Identities = 239/383 (62%), Positives = 303/383 (79%), Gaps = 4/383 (1%) Query: 1 VDSLTYSSSKRNWRSDKLSRLGSSIFAEVAAWKGEAAKSGLDVIDLGIGSPDQAPAPEIR 60 V+++ +SKR+WR+DKLS++GSSIFAEV+ WK EAA++G +IDL IGSPD+ P+ +IR Sbjct: 4 VNTMPNQTSKRSWRADKLSQIGSSIFAEVSEWKQEAAQAGRHIIDLSIGSPDRGPSEDIR 63 Query: 61 RVLSEAVLRENSYSYPSSKGSAAFRRQAAAWMEARFGVRIDSEDEIVALMGSQDGLAHLA 120 +LS+ L+E++Y+YP ++G+ FR Q+AAWM+ RFGV +D + EI+ALMGSQDGL+HLA Sbjct: 64 EILSQEALKEDNYTYPGTRGTMEFREQSAAWMKHRFGVNVDPDTEILALMGSQDGLSHLA 123 Query: 121 LAVCNPGDLAIVPDPGYPIYSGSLAIAGVRAWTLPLLERNAFIPDLDSIPDEIWQEAVFI 180 A+CNPGD+AIVP+PGYPIY+G+LAIAGV W LPL E F+PDLDSIP+EIW +A FI Sbjct: 124 QAICNPGDMAIVPNPGYPIYAGALAIAGVTPWYLPLKEERRFVPDLDSIPEEIWAKATFI 183 Query: 181 LLSFPGNPISTTVDLAYMEKLITLARKWNVLVIHDLAYSEMGFDGYKPVSILQVPGALDT 240 LL+FPGNPI+ DLA+ EKL+ LA+KW+VL++HDLAYSEMGFDGY+P+S+LQ PGA+D Sbjct: 184 LLNFPGNPIAVQADLAFFEKLVGLAKKWDVLIVHDLAYSEMGFDGYRPISVLQAPGAIDI 243 Query: 241 AVEFHSFSKSFNMAGCRIGFMTGNREAVNALRELKSNVDYGVFDPIQXXXXXX--XXXXX 298 AVEFHSFSKSFNMAGCRIGF+ G+ EAV ALRE KSN+D+GVF P+Q Sbjct: 244 AVEFHSFSKSFNMAGCRIGFLAGHVEAVGALREYKSNIDFGVFKPVQTAAVHALRQAMAA 303 Query: 299 XXXDGGVAPLYERRRDVFITELARQGWAVPKPKATMFIWAPLPEAYPAGKEEGRSRSFAR 358 + GVA LYE+RRDV LA GW VPKP+ATMF+WA LP A+ +E SR FAR Sbjct: 304 SNEERGVASLYEQRRDVLAASLAEAGWDVPKPQATMFLWARLPVAF--REEAWSSRRFAR 361 Query: 359 DLLLKTGVAVIPGDAFGEQGNGF 381 +LLL TGVAVIPGDAFG +G G+ Sbjct: 362 ELLLNTGVAVIPGDAFGSEGEGY 384 >B1D7C1.1 B1D7C1_9BACL Aminotransferase class I and II Length = 397 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 228/378 (60%), Positives = 287/378 (75%), Gaps = 13/378 (3%) Query: 10 KRNWRSDKLSRLGSSIFAEVAAWKGEAAKSGLDVIDLGIGSPDQAPAPEIRRVLSEAVLR 69 +++WRS++LS+LGSSIFAEVA W+ EAA G D+I+LGIGSPD+ P +R+ LSEA LR Sbjct: 2 RKSWRSERLSQLGSSIFAEVAEWRKEAAGKGRDIINLGIGSPDKPPTEAVRKALSEAALR 61 Query: 70 ENSYSYPSSKGSAAFRRQAAAWMEARFGVRIDSEDEIVALMGSQDGLAHLALAVCNPGDL 129 + Y+YP + GS FRRQAAAWME RFGV++D + E+V+LMGSQDGL+HLA+++CNPGD+ Sbjct: 62 TDIYAYPGTHGSTGFRRQAAAWMEHRFGVKLDPDRELVSLMGSQDGLSHLAMSLCNPGDV 121 Query: 130 AIVPDPGYPIYSGSLAIAGVRAWTLPLLERNAFIPDLDSIPDEIWQEAVFILLSFPGNPI 189 IVP+PGYPIY+ +LA+AGV + LPL E N F+PDLDS+P+E+W+ A FILL++PGNP+ Sbjct: 122 VIVPNPGYPIYTAALALAGVEPYLLPLKEENHFLPDLDSVPEEVWERAKFILLNYPGNPV 181 Query: 190 STTVDLAYMEKLITLARKWNVLVIHDLAYSEMGFDGYKPVSILQVPGALDTAVEFHSFSK 249 S +DLA+ E+L+ A+ + VLV+HD AYSEM FDG++P SIL VPGALD AVEFHS SK Sbjct: 182 SAIIDLAFFERLLAKAKPYGVLVVHDAAYSEMAFDGHEPPSILAVPGALDGAVEFHSLSK 241 Query: 250 SFNMAGCRIGFMTGNREAVNALRELKSNVDYGVFDPIQXXXXXXXXXXXXXX---DGGVA 306 SFNMAGCRIGF+ GNREAV ALRELK N+DYGVF +Q GV Sbjct: 242 SFNMAGCRIGFLAGNREAVGALRELKENIDYGVFGAVQEAGVAALQEAMSASAPPKAGV- 300 Query: 307 PLYERRRDVFITELARQGWAVPKPKATMFIWAPLPEAYPAGKEEG---RSRSFARDLLLK 363 LYE+RR+ FI LA +GWAV KPKATMF+WA LPE + +G SR FAR LL + Sbjct: 301 -LYEQRRNSFIEALAAEGWAVEKPKATMFVWAKLPE-----RSDGTTWTSREFARGLLDQ 354 Query: 364 TGVAVIPGDAFGEQGNGF 381 TGV VIPG+AFG +G GF Sbjct: 355 TGVVVIPGEAFGSEGEGF 372 >Q24W68.1 Q24W68_DESHY Putative uncharacterized protein Length = 393 Score = 368 bits (944), Expect = e-100, Method: Compositional matrix adjust. Identities = 177/369 (47%), Positives = 248/369 (67%), Gaps = 10/369 (2%) Query: 14 RSDKLSRLGSSIFAEVAAWKGEAAKSGLDVIDLGIGSPDQAPAPEIRRVLSEAVLRENSY 73 ++ +LS LG+S+F E+ + E K+G +I+L IGSPD++P+ EIR+VL+E VL SY Sbjct: 7 KARRLSSLGASVFTEMDDLRKELEKAGKQLINLSIGSPDRSPSAEIRKVLAEGVLDGGSY 66 Query: 74 SYPSSKGSAAFRRQAAAWMEARFGVRIDSEDEIVALMGSQDGLAHLALAVCNPGDLAIVP 133 Y ++G+ +FR A W + RFGV +D E E++ LMGSQDGLAH+ LA+C+PGD+A++P Sbjct: 67 GYTLTRGTESFRSGCARWYKERFGVNLDPEKEVLPLMGSQDGLAHIFLALCDPGDVALIP 126 Query: 134 DPGYPIYSGSLAIAGVRAWTLPLLERNAFIPDLDSIPDEIWQEAVFILLSFPGNPISTTV 193 DPGYPIY+ L +AG LPL E N F+PDL +I DE+ Q+A + L++P NP + Sbjct: 127 DPGYPIYTAGLVLAGGEKVALPLREENGFLPDLSAIADEVAQQAKIMFLNYPNNPTAAVA 186 Query: 194 DLAYMEKLITLARKWNVLVIHDLAYSEMGFDGYKPVSILQVPGALDTAVEFHSFSKSFNM 253 L++ E+++ ARK ++V HD AYSE+ FDGY+PVS LQVPGA + +EFHS SK++N+ Sbjct: 187 PLSFFEEVVDFARKNRIVVCHDAAYSELAFDGYRPVSFLQVPGAKEVGIEFHSVSKTYNL 246 Query: 254 AGCRIGFMTGNREAVNALRELKSNVDYGVFDP-IQXXXXXXXXXXXXXXDGGVAPLYERR 312 AG R+GF GNRE + AL ELKSN+DYGVF+P +Q A Y+ R Sbjct: 247 AGVRLGFAVGNREIIGALAELKSNIDYGVFEPALQAGAYALSASQENVEQNRRA--YQER 304 Query: 313 RDVFITELARQGWAVPKPKATMFIWAPLPEAYPAGKEEGRSRSFARDLLLKTGVAVIPGD 372 RD+++ A+ GW++P P+ +MFIWAP+P A SRSFA L + GV V+PG Sbjct: 305 RDIWVKGCAQAGWSMPSPRGSMFIWAPVPTAQD-------SRSFAFALAREAGVIVVPGV 357 Query: 373 AFGEQGNGF 381 AFGE G G+ Sbjct: 358 AFGEYGEGY 366 >C0ZL17.1 C0ZL17_BREBN Probable aminotransferase EC=2.6.1.- Length = 395 Score = 366 bits (939), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 178/368 (48%), Positives = 247/368 (67%), Gaps = 9/368 (2%) Query: 15 SDKLSRLGSSIFAEVAAWKGEAAKSGLDVIDLGIGSPDQAPAPEIRRVLSEAVLRENSYS 74 S +L+ L + IF+E+ A K E AK+ V DL IGSPDQ P ++ + L A+ + NS+ Sbjct: 5 SKRLNHLSADIFSEMDARKREVAKTR-TVYDLSIGSPDQQPDEKLLQTLIHAIWQPNSFR 63 Query: 75 YPSSKGSAAFRRQAAAWMEARFGVRIDSEDEIVALMGSQDGLAHLALAVCNPGDLAIVPD 134 YP S+G+AAFR + A W + RFGV + + E+ +LMGSQDGLAH ALA +PGD+ +VPD Sbjct: 64 YPLSEGTAAFREEVARWYQYRFGVELAPDGEVHSLMGSQDGLAHFALAWTDPGDIVLVPD 123 Query: 135 PGYPIYSGSLAIAGVRAWTLPLLERNAFIPDLDSIPDEIWQEAVFILLSFPGNPISTTVD 194 PGYPIY GSL +AG + +PL N F+P L IP+EI A F++L++P NP+S Sbjct: 124 PGYPIYEGSLHLAGAVPYRMPLRAENEFLPKLTDIPEEIAARATFMILNYPNNPVSAVAT 183 Query: 195 LAYMEKLITLARKWNVLVIHDLAYSEMGFDGYKPVSILQVPGALDTAVEFHSFSKSFNMA 254 LA+ E+++ A++++++V+HDLAYSEM FDGY+ S LQVPGA + +EF+SFSKSFNMA Sbjct: 184 LAFFEEVVAFAKRFDIIVVHDLAYSEMVFDGYQAPSFLQVPGAKEVGIEFNSFSKSFNMA 243 Query: 255 GCRIGFMTGNREAVNALRELKSNVDYGVFDPIQXXXXXXXXXXXXX-XDGGVAPLYERRR 313 GCRI ++ GN + + L +KSN+DYGVF P+Q + VAP+Y+ RR Sbjct: 244 GCRIAYVVGNADIIKPLAIVKSNIDYGVFLPVQQMAIEALRKDRESGGENTVAPVYQERR 303 Query: 314 DVFITELARQGWAVPKPKATMFIWAPLPEAYPAGKEEGRSRSFARDLLLKTGVAVIPGDA 373 DV + LA+ GW++P PKATMF+WA +P + SR FA LL + GV V+PG A Sbjct: 304 DVLLGALAKAGWSIPSPKATMFVWAAVPNGW-------TSREFAFALLEQAGVVVVPGSA 356 Query: 374 FGEQGNGF 381 FGE+G G+ Sbjct: 357 FGEEGEGY 364 >B8G060.1 B8G060_DESHD Aminotransferase class I and II Length = 388 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 175/369 (47%), Positives = 247/369 (66%), Gaps = 10/369 (2%) Query: 14 RSDKLSRLGSSIFAEVAAWKGEAAKSGLDVIDLGIGSPDQAPAPEIRRVLSEAVLRENSY 73 ++ +LS LG+S+F E+ + E K+G +I+L IGSPD++P+ EIR+VL+E VL SY Sbjct: 2 KARRLSSLGASVFTEMDDLRKELEKAGKQLINLSIGSPDRSPSAEIRKVLAEGVLDGGSY 61 Query: 74 SYPSSKGSAAFRRQAAAWMEARFGVRIDSEDEIVALMGSQDGLAHLALAVCNPGDLAIVP 133 Y ++G+ +FR A W + RFGV +D E E++ LMGSQDGLAH+ LA+C+PGD+A++P Sbjct: 62 GYTLTRGTESFRSGCARWYKERFGVNLDPEKEVLPLMGSQDGLAHIFLALCDPGDVALIP 121 Query: 134 DPGYPIYSGSLAIAGVRAWTLPLLERNAFIPDLDSIPDEIWQEAVFILLSFPGNPISTTV 193 DPGYPIY+ L +AG LPL E N F+PDL +I DE+ Q+A + L++P NP + Sbjct: 122 DPGYPIYTAGLVLAGGEKVALPLREENGFLPDLSAIEDEVAQQAKIMFLNYPNNPTAAVA 181 Query: 194 DLAYMEKLITLARKWNVLVIHDLAYSEMGFDGYKPVSILQVPGALDTAVEFHSFSKSFNM 253 L++ E+++ AR+ ++V HD AYSE+ FDGY+PVS LQVPGA + +EFHS SK++N+ Sbjct: 182 PLSFFEEVVDFARRNRIVVCHDAAYSELAFDGYRPVSFLQVPGAKEVGIEFHSVSKTYNL 241 Query: 254 AGCRIGFMTGNREAVNALRELKSNVDYGVFDP-IQXXXXXXXXXXXXXXDGGVAPLYERR 312 AG R+GF GN E + AL ELKSN+DYGVF+P +Q A Y+ R Sbjct: 242 AGVRLGFAVGNGEIIGALAELKSNIDYGVFEPALQAGAYALSASQENVEQNRRA--YQER 299 Query: 313 RDVFITELARQGWAVPKPKATMFIWAPLPEAYPAGKEEGRSRSFARDLLLKTGVAVIPGD 372 RD+++ A+ GW++P P+ +MFIWAP+P A SRSFA L + GV V+PG Sbjct: 300 RDIWVKGCAQAGWSMPSPRGSMFIWAPVPTAQD-------SRSFAFALAREAGVIVVPGV 352 Query: 373 AFGEQGNGF 381 AFGE G G+ Sbjct: 353 AFGEYGEGY 361 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.137 0.412 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,360,281,515 Number of extensions: 99716521 Number of successful extensions: 257871 Number of sequences better than 1.0e-05: 7345 Number of HSP's gapped: 247950 Number of HSP's successfully gapped: 7356 Length of query: 408 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 270 Effective length of database: 1,760,596,133 Effective search space: 475360955910 Effective search space used: 475360955910 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)