BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0194.0005.p
         (104 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K4T3.1 B3K4T3_9BACI Putative uncharacterized protein                106   5e-22

>B3K4T3.1 B3K4T3_9BACI Putative uncharacterized protein
          Length = 103

 Score =  106 bits (265), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 51/102 (50%), Positives = 72/102 (70%)

Query: 3   SMECIVHFEVDHTEGVKPLRGLLFLDEGQTPGEQELIDMFKDMKFAVRLDDREKLIFKPV 62
           SMECIVHF V H EG K LRGL+F+D+G+TP  ++L+DMF +M++ V  D  ++L+FKP 
Sbjct: 2   SMECIVHFTVGHKEGPKKLRGLIFVDKGETPTGEQLLDMFHEMEYRVVPDPHDELLFKPE 61

Query: 63  NPGENYSQIRITGFDSGKPNSKEDHELKSLVGNLLPQKPTGL 104
           N  E+Y+ IR+   D G+    ED  LK+L+  LLP++ TGL
Sbjct: 62  NGAESYTYIRVNELDMGQERYTEDRNLKALLNELLPKQRTGL 103


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.140    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 674,704,255
Number of extensions: 26631071
Number of successful extensions: 50405
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 50405
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 3,060,696,203
Length adjustment: 72
Effective length of query: 32
Effective length of database: 2,382,383,123
Effective search space: 76236259936
Effective search space used: 76236259936
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 126 (53.1 bits)