BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0194.0003.p
         (258 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3K4T1.1 B3K4T1_9BACI Putative uncharacterized protein                111   6e-23
A5KIQ1.1 A5KIQ1_9FIRM Putative uncharacterized protein                 67   1e-09
A7AY05.1 A7AY05_RUMGN Putative uncharacterized protein                 62   7e-08
B3KFS4.1 B3KFS4_9BACI Putative uncharacterized protein                 60   2e-07
B1I601.1 B1I601_DESAP Putative uncharacterized protein                 55   7e-06

>B3K4T1.1 B3K4T1_9BACI Putative uncharacterized protein
          Length = 232

 Score =  111 bits (278), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 52/82 (63%), Positives = 64/82 (78%)

Query: 45  MGKLFYEGYRSRDMSVAEGKMVELSRGCFKYQEQIDELRARIAELKNERLCACGHVVALD 104
           MGK+FYEGYR +DMS+AE +MVEL++ C   QEQI+ +R RIA LKNER+C CG VVALD
Sbjct: 1   MGKVFYEGYRQQDMSIAEKEMVELAQTCDGLQEQIEAIRNRIAVLKNERVCECGRVVALD 60

Query: 105 ANFCPHCGRKLEELSPRKEAAA 126
           ANFCP+CG KL  L   +E+A 
Sbjct: 61  ANFCPYCGNKLANLIDPEESAP 82



 Score = 64.7 bits (156), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 26/45 (57%), Positives = 32/45 (71%)

Query: 214 WKASEPEEAAVSEDGGVRDIVKCQICRADLPKGSMWCPRCGSEQI 258
           W+ +   +  V +D   RD+VKCQIC  DLPKGS WCPRCG+EQI
Sbjct: 188 WQENNQSQDYVGDDEATRDMVKCQICSVDLPKGSKWCPRCGAEQI 232


>A5KIQ1.1 A5KIQ1_9FIRM Putative uncharacterized protein
          Length = 256

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 9/119 (7%)

Query: 2   NFLQRLKDGASRVSEKAQSSVEIGKLNGQISDIEREMEIEFMKMGKLFYEGYRS---RDM 58
           NF +R  + A  V+ KA   +EI ++  QI D+ RE  ++ M++GK  YE Y+S    D 
Sbjct: 26  NFGKRFGETAEMVTNKAGEMIEIQRVKSQIRDLARENAVDMMELGKAVYERYKSGEELDD 85

Query: 59  SVAEGKMVELSRGCFKYQEQIDELRARIAELKNERLCA-CGHVVALDANFCPHCGRKLE 116
           S A     ++     + +++I++   +IA LK    C  CG +V+ D  +CP+CG K+E
Sbjct: 86  STA-----QICDSIKEREKEIEKYERKIAVLKGSAACVKCGRMVSEDMAYCPYCGEKME 139


>A7AY05.1 A7AY05_RUMGN Putative uncharacterized protein
          Length = 230

 Score = 61.6 bits (148), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 3/114 (2%)

Query: 5   QRLKDGASRVSEKAQSSVEIGKLNGQISDIEREMEIEFMKMGKLFYEGYRSRDMSVAEGK 64
           +++ +    V+ KA   +EI +L GQI  +ER  E + ++MG+  YE Y++ +    + +
Sbjct: 37  KKIGETTETVTSKAGEMMEIQRLRGQIRTLERGNEADMLEMGRFLYEKYQAGEAMDEQVQ 96

Query: 65  MVELSRGCFKYQEQIDELRARIAELKNERLCA-CGHVVALDANFCPHCGRKLEE 117
           M  L        E I+  +A+I E+K    CA CG  VA +  +CP+CG K EE
Sbjct: 97  M--LCEKIDNRTESIERHQAKIEEIKGTSTCAECGKQVAKEMAYCPYCGAKKEE 148


>B3KFS4.1 B3KFS4_9BACI Putative uncharacterized protein
          Length = 143

 Score = 60.5 bits (145), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 9/128 (7%)

Query: 1   MNFLQRLKDGASRVSEKAQSSVEIGKL----NGQISDIEREMEIEFMKMGKLFYEGYRSR 56
           M+F  + K G S    KA++ VEI +L    NG+ SDI+ ++    +++GK+ +    + 
Sbjct: 1   MSFFDKFKAGVSDAGNKAKTLVEINRLKLQNNGKKSDIDEQL----LEIGKVVFASTEAG 56

Query: 57  DMSVAEGKMVELSRGCFKYQEQIDELRARIAELKNERLC-ACGHVVALDANFCPHCGRKL 115
                +  + +      +   +I++   +IA L +E++C  CG+  A++A FC HCGR  
Sbjct: 57  KWPPDQESIQDYVAKIHQLNFEIEQNLLQIANLTDEKICRGCGNSSAVNAKFCAHCGRTF 116

Query: 116 EELSPRKE 123
           E +  + E
Sbjct: 117 EVIQVQTE 124


>B1I601.1 B1I601_DESAP Putative uncharacterized protein
          Length = 117

 Score = 55.1 bits (131), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 1   MNFLQRLKDGASRVSEKAQSSVEIGKLNGQISDIEREMEIEFMKMGKLFYEGYRSRDMSV 60
           MN   R++ G   VSEK+   +E+ +    I+ +E E   +F ++G+L Y  Y    ++ 
Sbjct: 1   MNIWDRVRKGTQTVSEKSSGLLEMAQTRAAITKLETEKIRKFTELGELTYRVYNREHVAD 60

Query: 61  AEGKMVELSRGCFKYQEQIDELRARIAELKN-ERLC-ACGHVVALDANFCPHCGRKLEEL 118
           A     E+ + C + Q+   EL A  A L+    +C  C   V  +A +CP CG+ L  +
Sbjct: 61  A-----EMEKLCNEIQDLDRELEAHRARLEGATPVCPGCSRPVKPEARYCPECGQSLRPV 115

Query: 119 SP 120
            P
Sbjct: 116 RP 117


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.318    0.131    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,084,370,110
Number of extensions: 32881858
Number of successful extensions: 110841
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 110882
Number of HSP's successfully gapped: 9
Length of query: 258
Length of database: 3,060,696,203
Length adjustment: 133
Effective length of query: 125
Effective length of database: 1,807,701,208
Effective search space: 225962651000
Effective search space used: 225962651000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 130 (54.7 bits)