BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0023.p (446 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDZ5.1 B3KDZ5_9BACI Phosphoglucosamine mutase EC=5.4.2.10 682 0.0 B1D5J3.1 B1D5J3_9BACL Phosphoglucosamine mutase EC=5.4.2.10 653 0.0 C0ZIM8.1 GLMM_BREBN Phosphoglucosamine mutase EC=5.4.2.10 529 e-148 C3J780.1 C3J780_9BACI Phosphoglucosamine mutase EC=5.4.2.10 519 e-145 B7YET9.1 B7YET9_9BACI Phosphoglucosamine mutase EC=5.4.2.10 519 e-145 >B3KDZ5.1 B3KDZ5_9BACI Phosphoglucosamine mutase EC=5.4.2.10 Length = 446 Score = 682 bits (1759), Expect = 0.0, Method: Compositional matrix adjust. Identities = 342/445 (76%), Positives = 373/445 (83%) Query: 1 MGKYFGTDGVRGVANRELTAEMAYSIGRCGGYVLAGNVEKPKVVIGMDTRISGPLLESAL 60 MGKYFGTDGVRGVAN+ELTAEMAYSIGRCGGYVL G+ EKP V+IGMDTR+SG +LESAL Sbjct: 1 MGKYFGTDGVRGVANQELTAEMAYSIGRCGGYVLTGDKEKPTVIIGMDTRVSGAMLESAL 60 Query: 61 VAGLLSIGARVIRLGIVSTPAVAYITRLLKADAGVMISASHNPVEDNGIKFFGGDGFKLT 120 VAGLLSIGA VIRLG+VSTPAVAYITRLLKADAGVMISASHNPV+DNGIKFFGGDGFKL+ Sbjct: 61 VAGLLSIGAHVIRLGVVSTPAVAYITRLLKADAGVMISASHNPVQDNGIKFFGGDGFKLS 120 Query: 121 DETELRIEELMDAEIDELPRPVGAGLGTVSIDNDAKYLYLDYLKTTISHSFAGLKVVLDC 180 DETEL+IEELMDAE D LPRP+GA LG + +DN++KY YL+YLKTTIS+ F GLK+VLDC Sbjct: 121 DETELKIEELMDAETDNLPRPIGADLGELLVDNESKYKYLEYLKTTISNRFDGLKIVLDC 180 Query: 181 AHGAAYELAPRLFRELGAEVIAIGSEPDGLNINDGFGSTHPETLREEVLRQXXXXXXXXX 240 A+GAAYELAP+LFRELGA+VI IG+EP+GLNIND GSTHPE L E VL+ Sbjct: 181 ANGAAYELAPKLFRELGADVITIGAEPNGLNINDHCGSTHPEKLVEAVLQHGADLGLAFD 240 Query: 241 XXXXXXIAIDENGDEVDGDFILCICGDAMNRAGKLKDGTIVSTVMSNIGFYKATEKLALN 300 IAID G+EVDGDFILCICGDAMNRAGKLK+GTIVSTVMSNIGFYKA + L L Sbjct: 241 GDADRLIAIDAKGEEVDGDFILCICGDAMNRAGKLKEGTIVSTVMSNIGFYKACDSLKLK 300 Query: 301 TAKTAVGDRYVMEEMRRGGYNLGGEQSGHVIFLDYNTTGDGILTAIQLVETXXXXXXXXX 360 TAKTAVGDRYVMEEMRRGGYNLGGEQSGHVIFLD+NTTGDGILT IQLV+T Sbjct: 301 TAKTAVGDRYVMEEMRRGGYNLGGEQSGHVIFLDHNTTGDGILTGIQLVDTLVASGKPLH 360 Query: 361 XXXXXXTKYPQVLVNVRVQDKTNYPNNPAIEAAIQEVEGKLGDNGRVLVRPSGTEPLIRV 420 KYPQVLVNVRV DK+ Y N IE+AI EVEG LGDNGRVLVRPSGTE LIRV Sbjct: 361 ELKSSMRKYPQVLVNVRVGDKSKYQGNTVIESAIAEVEGILGDNGRVLVRPSGTESLIRV 420 Query: 421 MAEGPDKAELDLYVGHIVDVVQREL 445 MAEGPDK ELD YV I DVV+REL Sbjct: 421 MAEGPDKDELDRYVTQIADVVKREL 445 >B1D5J3.1 B1D5J3_9BACL Phosphoglucosamine mutase EC=5.4.2.10 Length = 446 Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust. Identities = 319/445 (71%), Positives = 370/445 (83%) Query: 1 MGKYFGTDGVRGVANRELTAEMAYSIGRCGGYVLAGNVEKPKVVIGMDTRISGPLLESAL 60 MGKYFGTDGVRGVAN+ELT E+AY IGRCGGYVL G +KPKVVIG+DTRISGP+LE+AL Sbjct: 1 MGKYFGTDGVRGVANQELTPELAYKIGRCGGYVLTGQADKPKVVIGLDTRISGPMLEAAL 60 Query: 61 VAGLLSIGARVIRLGIVSTPAVAYITRLLKADAGVMISASHNPVEDNGIKFFGGDGFKLT 120 +AGLLSIGA VIRLG+VSTPAVAYITR LKADAGVMISASHNPV+DNGIKFFGGDGFKL+ Sbjct: 61 IAGLLSIGASVIRLGVVSTPAVAYITRELKADAGVMISASHNPVQDNGIKFFGGDGFKLS 120 Query: 121 DETELRIEELMDAEIDELPRPVGAGLGTVSIDNDAKYLYLDYLKTTISHSFAGLKVVLDC 180 DETEL IE L+DAE+DELPRP+G +GTV+ D+ AK+ YLDYLKTTI F G+K+VLDC Sbjct: 121 DETELEIERLIDAEVDELPRPIGGDIGTVTNDDQAKFRYLDYLKTTIKGDFGGIKIVLDC 180 Query: 181 AHGAAYELAPRLFRELGAEVIAIGSEPDGLNINDGFGSTHPETLREEVLRQXXXXXXXXX 240 AHG+AYELAP++FRELGAE+I +G+EPDG NIN G GSTHPE LRE+VL Sbjct: 181 AHGSAYELAPKVFRELGAEIITVGAEPDGRNINAGVGSTHPEYLREQVLAHGADLGLSFD 240 Query: 241 XXXXXXIAIDENGDEVDGDFILCICGDAMNRAGKLKDGTIVSTVMSNIGFYKATEKLALN 300 IAID+ G+EVDGD+ILCICGDAM RAGKL + TIV+TVM+NIGF+KAT++L LN Sbjct: 241 GDADRLIAIDDKGEEVDGDYILCICGDAMKRAGKLHNDTIVTTVMANIGFFKATQRLDLN 300 Query: 301 TAKTAVGDRYVMEEMRRGGYNLGGEQSGHVIFLDYNTTGDGILTAIQLVETXXXXXXXXX 360 TA+TAVGDRYVMEEMRRGG+NLGGEQSGHVIFLDYNTTGDGILTA+QLV+T Sbjct: 301 TAQTAVGDRYVMEEMRRGGFNLGGEQSGHVIFLDYNTTGDGILTALQLVDTLVASGQKLS 360 Query: 361 XXXXXXTKYPQVLVNVRVQDKTNYPNNPAIEAAIQEVEGKLGDNGRVLVRPSGTEPLIRV 420 +KYPQVLVNVRV DK+ Y N AI A +++E +LGDNGRVLVRPSGTE LIRV Sbjct: 361 GLKTLMSKYPQVLVNVRVADKSLYAGNEAIVNAAEQIEKELGDNGRVLVRPSGTESLIRV 420 Query: 421 MAEGPDKAELDLYVGHIVDVVQREL 445 MAEGPDK +++ YV IV+VV+ +L Sbjct: 421 MAEGPDKDQIEEYVARIVNVVKEQL 445 >C0ZIM8.1 GLMM_BREBN Phosphoglucosamine mutase EC=5.4.2.10 Length = 448 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 265/448 (59%), Positives = 329/448 (73%), Gaps = 2/448 (0%) Query: 1 MGKYFGTDGVRGVANRELTAEMAYSIGRCGGYVLAGNVE--KPKVVIGMDTRISGPLLES 58 MGKYFGTDGVRGVAN +LT E+A+ IGR GGYVL + + KPKVVIG DTRISG +LE+ Sbjct: 1 MGKYFGTDGVRGVANTQLTPELAFKIGRVGGYVLTRHKQEGKPKVVIGRDTRISGQMLEN 60 Query: 59 ALVAGLLSIGARVIRLGIVSTPAVAYITRLLKADAGVMISASHNPVEDNGIKFFGGDGFK 118 AL+AGLLS+GA V+RLG++ST VAY+TR L ADAGVMISASHNP DNGIKFFG +GFK Sbjct: 61 ALLAGLLSVGAEVVRLGVISTSGVAYLTRALGADAGVMISASHNPFPDNGIKFFGSNGFK 120 Query: 119 LTDETELRIEELMDAEIDELPRPVGAGLGTVSIDNDAKYLYLDYLKTTISHSFAGLKVVL 178 L+DE E +E+ +DA D +PRP G +GTV + YL +LK+T+S F GLKVVL Sbjct: 121 LSDEVEAEVEQYLDAAEDTMPRPTGEQIGTVLEFLEGGQKYLSHLKSTVSERFDGLKVVL 180 Query: 179 DCAHGAAYELAPRLFRELGAEVIAIGSEPDGLNINDGFGSTHPETLREEVLRQXXXXXXX 238 DCA+GA LA RLF ++ AEVI IG+ P+G+NIND GSTHPE L EEVL+ Sbjct: 181 DCANGAVSSLAARLFADVDAEVITIGANPNGININDQCGSTHPERLVEEVLKHKADLGLS 240 Query: 239 XXXXXXXXIAIDENGDEVDGDFILCICGDAMNRAGKLKDGTIVSTVMSNIGFYKATEKLA 298 IA+D NG+ +DGD+I+ IC A+ GKL + T+V+TVM+N+GF+K E+ + Sbjct: 241 FDGDADRCIAVDNNGEIIDGDYIMAICARALKAKGKLNNNTVVTTVMANMGFFKGMEECS 300 Query: 299 LNTAKTAVGDRYVMEEMRRGGYNLGGEQSGHVIFLDYNTTGDGILTAIQLVETXXXXXXX 358 +NT KTAVGDRYV+EEM RGGYNLGGEQSGH++FLDYNTTGDG+LT +QL+ Sbjct: 301 INTTKTAVGDRYVVEEMLRGGYNLGGEQSGHIVFLDYNTTGDGLLTGLQLLNIIKESGKP 360 Query: 359 XXXXXXXXTKYPQVLVNVRVQDKTNYPNNPAIEAAIQEVEGKLGDNGRVLVRPSGTEPLI 418 KYPQ+L+NVRV+DK+ N AI AI+EVE L NGRVLVRPSGTEP++ Sbjct: 361 LSELKQVMVKYPQLLINVRVEDKSKLNGNEAIAQAIREVEEDLAGNGRVLVRPSGTEPIV 420 Query: 419 RVMAEGPDKAELDLYVGHIVDVVQRELV 446 RVMAEGPD A+L+ V IVDVV+++LV Sbjct: 421 RVMAEGPDAAQLEGLVNRIVDVVKQQLV 448 >C3J780.1 C3J780_9BACI Phosphoglucosamine mutase EC=5.4.2.10 Length = 449 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 262/446 (58%), Positives = 318/446 (71%), Gaps = 1/446 (0%) Query: 1 MGKYFGTDGVRGVANRELTAEMAYSIGRCGGYVLAGNVEKPKVVIGMDTRISGPLLESAL 60 MGKYFGTDGVRGVANRELT E+A+ IGRCGGYVL + E+PKV+IG DTRISG +LE AL Sbjct: 1 MGKYFGTDGVRGVANRELTPELAFQIGRCGGYVLTKSAERPKVLIGRDTRISGHMLEGAL 60 Query: 61 VAGLLSIGARVIRLGIVSTPAVAYITRLLKADAGVMISASHNPVEDNGIKFFGGDGFKLT 120 VAGLLSIGA V+RLG++STP VAY+T+ L A AG+MISASHNPV+DNGIKFFG DGFKL+ Sbjct: 61 VAGLLSIGAEVMRLGVISTPGVAYLTKALGAQAGIMISASHNPVQDNGIKFFGPDGFKLS 120 Query: 121 DETELRIEELMDAEIDELPRPVGAGLGTVSIDNDAKYLYLDYLKTTI-SHSFAGLKVVLD 179 DE E IE L+D+ D LPRP+GAGLG V+ + YL YLK TI F+G+K+ LD Sbjct: 121 DEQEAEIEALIDSAEDMLPRPIGAGLGQVNDYFEGGQKYLQYLKQTIDEEDFSGMKIALD 180 Query: 180 CAHGAAYELAPRLFRELGAEVIAIGSEPDGLNINDGFGSTHPETLREEVLRQXXXXXXXX 239 CAHGA LA LF +L A+V+ +G+ P+GLNIN+G GSTHPE L V + Sbjct: 181 CAHGATSSLATYLFADLDADVVTMGASPNGLNINEGVGSTHPEALAAFVKEKGADVGLAF 240 Query: 240 XXXXXXXIAIDENGDEVDGDFILCICGDAMNRAGKLKDGTIVSTVMSNIGFYKATEKLAL 299 IA+DE G+ VDGD I+ IC + G+LK T+VSTVMSN+GFYKA E + Sbjct: 241 DGDGDRLIAVDERGNIVDGDQIMYICAKYLKETGRLKQQTVVSTVMSNLGFYKALEAQGI 300 Query: 300 NTAKTAVGDRYVMEEMRRGGYNLGGEQSGHVIFLDYNTTGDGILTAIQLVETXXXXXXXX 359 + +TAVGDRYV+EEM++ GYNLGGEQSGH+IFLDYNTTGDG+LTA+QLV Sbjct: 301 KSVQTAVGDRYVVEEMKKNGYNLGGEQSGHIIFLDYNTTGDGMLTALQLVNIMKIKGKPL 360 Query: 360 XXXXXXXTKYPQVLVNVRVQDKTNYPNNPAIEAAIQEVEGKLGDNGRVLVRPSGTEPLIR 419 KYPQ+LVNVRV DK N ++ IQEVE ++ NGRVLVRPSGTEPL+R Sbjct: 361 SELAGEMKKYPQLLVNVRVADKEKAMENEQVKKVIQEVEAEMNGNGRVLVRPSGTEPLVR 420 Query: 420 VMAEGPDKAELDLYVGHIVDVVQREL 445 +MAE + YV I DVV+RE+ Sbjct: 421 IMAEAQTEEACRAYVERIADVVRREM 446 >B7YET9.1 B7YET9_9BACI Phosphoglucosamine mutase EC=5.4.2.10 Length = 449 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 262/446 (58%), Positives = 318/446 (71%), Gaps = 1/446 (0%) Query: 1 MGKYFGTDGVRGVANRELTAEMAYSIGRCGGYVLAGNVEKPKVVIGMDTRISGPLLESAL 60 MGKYFGTDGVRGVANRELT E+A+ IGRCGGYVL + E+PKV+IG DTRISG +LE AL Sbjct: 1 MGKYFGTDGVRGVANRELTPELAFQIGRCGGYVLTKSAERPKVLIGRDTRISGHMLEGAL 60 Query: 61 VAGLLSIGARVIRLGIVSTPAVAYITRLLKADAGVMISASHNPVEDNGIKFFGGDGFKLT 120 VAGLLSIGA V+RLG++STP VAY+T+ L A AG+MISASHNPV+DNGIKFFG DGFKL+ Sbjct: 61 VAGLLSIGAEVMRLGVISTPGVAYLTKALGAQAGIMISASHNPVQDNGIKFFGPDGFKLS 120 Query: 121 DETELRIEELMDAEIDELPRPVGAGLGTVSIDNDAKYLYLDYLKTTI-SHSFAGLKVVLD 179 DE E IE L+D+ D LPRP+GAGLG V+ + YL YLK TI F+G+K+ LD Sbjct: 121 DEQEAEIEALIDSAEDMLPRPIGAGLGQVNDYFEGGQKYLQYLKQTIDEEDFSGMKIALD 180 Query: 180 CAHGAAYELAPRLFRELGAEVIAIGSEPDGLNINDGFGSTHPETLREEVLRQXXXXXXXX 239 CAHGA LA LF +L A+V+ +G+ P+GLNIN+G GSTHPE L V + Sbjct: 181 CAHGATSSLATYLFADLDADVVTMGASPNGLNINEGVGSTHPEALAAFVKEKGADVGLAF 240 Query: 240 XXXXXXXIAIDENGDEVDGDFILCICGDAMNRAGKLKDGTIVSTVMSNIGFYKATEKLAL 299 IA+DE G+ VDGD I+ IC + G+LK T+VSTVMSN+GFYKA E + Sbjct: 241 DGDGDRLIAVDERGNIVDGDQIMYICAKYLKETGRLKQQTVVSTVMSNLGFYKALEAQGI 300 Query: 300 NTAKTAVGDRYVMEEMRRGGYNLGGEQSGHVIFLDYNTTGDGILTAIQLVETXXXXXXXX 359 + +TAVGDRYV+EEM++ GYNLGGEQSGH+IFLDYNTTGDG+LTA+QLV Sbjct: 301 KSVQTAVGDRYVVEEMKKNGYNLGGEQSGHIIFLDYNTTGDGMLTALQLVNIMKIKGKPL 360 Query: 360 XXXXXXXTKYPQVLVNVRVQDKTNYPNNPAIEAAIQEVEGKLGDNGRVLVRPSGTEPLIR 419 KYPQ+LVNVRV DK N ++ IQEVE ++ NGRVLVRPSGTEPL+R Sbjct: 361 SELAGEMKKYPQLLVNVRVADKEKAMENEQVKKVIQEVEAEMNGNGRVLVRPSGTEPLVR 420 Query: 420 VMAEGPDKAELDLYVGHIVDVVQREL 445 +MAE + YV I DVV+RE+ Sbjct: 421 IMAEAQTEEACRAYVERIADVVRREM 446 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.317 0.139 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,546,208,644 Number of extensions: 104596415 Number of successful extensions: 268942 Number of sequences better than 1.0e-05: 3523 Number of HSP's gapped: 260399 Number of HSP's successfully gapped: 3536 Length of query: 446 Length of database: 3,060,696,203 Length adjustment: 139 Effective length of query: 307 Effective length of database: 1,751,175,118 Effective search space: 537610761226 Effective search space used: 537610761226 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 133 (55.8 bits)