BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0019.p (388 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2PMD7.1 C2PMD7_BACCE Major facilitator superfamily MFS_1 296 2e-78 C1EYB5.1 C1EYB5_BACC3 Major facilitator family transporter 295 5e-78 B3ZWH1.1 B3ZWH1_BACCE Major facilitator family transporter 295 5e-78 C2Q2X3.1 C2Q2X3_BACCE Major facilitator superfamily MFS_1 295 5e-78 C2SSA0.1 C2SSA0_BACCE Major facilitator superfamily MFS_1 295 7e-78 >C2PMD7.1 C2PMD7_BACCE Major facilitator superfamily MFS_1 Length = 394 Score = 296 bits (759), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 160/389 (41%), Positives = 237/389 (60%), Gaps = 1/389 (0%) Query: 1 MDRRVWILTIAAFVVGTVELVIAGIIEMIAQDLQVSVAAAGQLVTVYSLVFALGSPVIIS 60 ++ RV+IL IAAFVVGTVEL+I G ++++A DL+VS++AAGQL+T++S+VFAL PV+++ Sbjct: 5 LNFRVYILAIAAFVVGTVELIIGGTLDLVANDLEVSISAAGQLITIFSVVFALSGPVLLA 64 Query: 61 LTANMERRRLLIIAMCVFFAGNILSIISPNFTLLLISRVVLAASCSXXXXXXXXXXXXXX 120 +T ER+RL I A+ +F GNI+S S N+ +L+ SRVV AAS S Sbjct: 65 VTGKFERKRLYIGALSIFLIGNIISAFSVNYGMLMFSRVVCAASGSLIIALSVTLASSVV 124 Query: 121 PQALKGRAIGIIFMGLSAALMLGVPLGTWIGDRWGWRMTFXXXXXXXXXXXXCVQRFLPK 180 + RAIGIIFMG+S +L+LGVPLG +G+ +GWR F C+ FL K Sbjct: 125 EPHFRARAIGIIFMGISGSLVLGVPLGLVLGNAYGWRAPFVLISVLTVIAIACISLFLTK 184 Query: 181 TPPQPSVSLRTQLGTLKSSKILSVHLVSILQMTGQFTIYAYITPYLQTTMGLSAPIISLV 240 PP +S+R Q+ TLK KI+S L S L +TG T+YAY+TP+L+ M + A IS+ Sbjct: 185 VPPTSVLSIREQIATLKDKKIVSAQLTSFLFLTGHLTLYAYLTPFLKDVMHVEADWISVF 244 Query: 241 LLVYGLXXXXXXXXXXXXXDKLGPRKTIILTLVLHAAAILLLPYAVSNLFSLLLVVAVWC 300 ++G+ DK G +K+II +++ A AI +LP + ++++ +W Sbjct: 245 YFIFGIAAVLGGGLGGLLADKWGSKKSIISIIIVFACAIFILPMMTFSFPLFIIMMGIWS 304 Query: 301 TFNMAPSPAIQSYLIETAPESADIQLSFNTSSLHIGVALGSMIGGFVVSQYSISVNPVXX 360 + A SPA Q+YLIE APESA IQ S N S+LH+G+ALGS +GG V+ + S+ N Sbjct: 305 MLSWAISPAQQNYLIEIAPESAGIQQSLNNSALHLGIALGSTVGGVVIEKSSVIYNAWVG 364 Query: 361 XXXXXXXXXXXXYSMTRKKNRE-AVEQAV 388 +S+TR ++ + A E+++ Sbjct: 365 GGFIILALLCAIFSITRGRSTQFAKEESI 393 >C1EYB5.1 C1EYB5_BACC3 Major facilitator family transporter Length = 390 Score = 295 bits (755), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 161/389 (41%), Positives = 236/389 (60%), Gaps = 1/389 (0%) Query: 1 MDRRVWILTIAAFVVGTVELVIAGIIEMIAQDLQVSVAAAGQLVTVYSLVFALGSPVIIS 60 M+ RV+IL IAAFVVGTVEL+I G ++++A DL VS++AAGQL+T++S+VFAL PV+++ Sbjct: 1 MNFRVYILAIAAFVVGTVELIIGGTLDLVANDLGVSISAAGQLITIFSVVFALSGPVLLA 60 Query: 61 LTANMERRRLLIIAMCVFFAGNILSIISPNFTLLLISRVVLAASCSXXXXXXXXXXXXXX 120 LT ER+ L + A+ +F GNI+S S N+ +L+ SRV+ AAS S Sbjct: 61 LTGKFERKTLYVGALSIFLIGNIISAFSVNYGMLMFSRVICAASGSLIIALSVTLASSVV 120 Query: 121 PQALKGRAIGIIFMGLSAALMLGVPLGTWIGDRWGWRMTFXXXXXXXXXXXXCVQRFLPK 180 + RAIGIIFMG+S +L+LGVPLG +G+ +GWR F C+ FL K Sbjct: 121 APQFRARAIGIIFMGISGSLVLGVPLGLVLGNAYGWRAPFVLISILTVMAIACISLFLTK 180 Query: 181 TPPQPSVSLRTQLGTLKSSKILSVHLVSILQMTGQFTIYAYITPYLQTTMGLSAPIISLV 240 PP +S+R Q+ TLK KI+S L S L +TG T+YAY+TP+L+ M + A IS+ Sbjct: 181 VPPTSVLSIREQIATLKDKKIVSAQLTSFLFLTGHLTLYAYLTPFLKDVMHVEANWISVF 240 Query: 241 LLVYGLXXXXXXXXXXXXXDKLGPRKTIILTLVLHAAAILLLPYAVSNLFSLLLVVAVWC 300 ++G+ DK G +K+II +++ A AI LLP + ++++ +W Sbjct: 241 YFIFGIAAVIGGGFGGWLADKWGSKKSIISIIIVFACAIFLLPLMTFSFPLFIIMMGLWS 300 Query: 301 TFNMAPSPAIQSYLIETAPESADIQLSFNTSSLHIGVALGSMIGGFVVSQYSISVNPVXX 360 + A SPA Q+YLIE APESA IQ S N S+LH+G+ALGS +GGFV+ + S+ N Sbjct: 301 MLSWAISPAQQNYLIEIAPESAGIQQSLNNSALHLGIALGSTVGGFVIEKSSVIYNAWVG 360 Query: 361 XXXXXXXXXXXXYSMTRKKNRE-AVEQAV 388 +S+TR ++ + A E+++ Sbjct: 361 GGFIILALLCAIFSITRGRSAQFAKEESI 389 >B3ZWH1.1 B3ZWH1_BACCE Major facilitator family transporter Length = 390 Score = 295 bits (755), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 161/389 (41%), Positives = 236/389 (60%), Gaps = 1/389 (0%) Query: 1 MDRRVWILTIAAFVVGTVELVIAGIIEMIAQDLQVSVAAAGQLVTVYSLVFALGSPVIIS 60 M+ RV+IL IAAFVVGTVEL+I G ++++A DL VS++AAGQL+T++S+VFAL PV+++ Sbjct: 1 MNFRVYILAIAAFVVGTVELIIGGTLDLVANDLGVSISAAGQLITIFSVVFALSGPVLLA 60 Query: 61 LTANMERRRLLIIAMCVFFAGNILSIISPNFTLLLISRVVLAASCSXXXXXXXXXXXXXX 120 LT ER+ L + A+ +F GNI+S S N+ +L+ SRV+ AAS S Sbjct: 61 LTGKFERKTLYVGALSIFLIGNIISAFSVNYGMLMFSRVICAASGSLIIALSVTLASSVV 120 Query: 121 PQALKGRAIGIIFMGLSAALMLGVPLGTWIGDRWGWRMTFXXXXXXXXXXXXCVQRFLPK 180 + RAIGIIFMG+S +L+LGVPLG +G+ +GWR F C+ FL K Sbjct: 121 APQFRARAIGIIFMGISGSLVLGVPLGLVLGNAYGWRAPFVLISILTVMAIACISLFLTK 180 Query: 181 TPPQPSVSLRTQLGTLKSSKILSVHLVSILQMTGQFTIYAYITPYLQTTMGLSAPIISLV 240 PP +S+R Q+ TLK KI+S L S L +TG T+YAY+TP+L+ M + A IS+ Sbjct: 181 VPPTSVLSIREQIATLKDKKIVSAQLTSFLFLTGHLTLYAYLTPFLKDVMHVEANWISVF 240 Query: 241 LLVYGLXXXXXXXXXXXXXDKLGPRKTIILTLVLHAAAILLLPYAVSNLFSLLLVVAVWC 300 ++G+ DK G +K+II +++ A AI LLP + ++++ +W Sbjct: 241 YFIFGIAAVIGGGFGGWLADKWGSKKSIISIIIVFACAIFLLPLMTFSFPLFIIMMGLWS 300 Query: 301 TFNMAPSPAIQSYLIETAPESADIQLSFNTSSLHIGVALGSMIGGFVVSQYSISVNPVXX 360 + A SPA Q+YLIE APESA IQ S N S+LH+G+ALGS +GGFV+ + S+ N Sbjct: 301 MLSWAISPAQQNYLIEIAPESAGIQQSLNNSALHLGIALGSTVGGFVIEKSSVIYNAWVG 360 Query: 361 XXXXXXXXXXXXYSMTRKKNRE-AVEQAV 388 +S+TR ++ + A E+++ Sbjct: 361 GGFIILALLCAIFSITRGRSAQFAKEESI 389 >C2Q2X3.1 C2Q2X3_BACCE Major facilitator superfamily MFS_1 Length = 394 Score = 295 bits (755), Expect = 5e-78, Method: Compositional matrix adjust. Identities = 155/386 (40%), Positives = 233/386 (60%) Query: 1 MDRRVWILTIAAFVVGTVELVIAGIIEMIAQDLQVSVAAAGQLVTVYSLVFALGSPVIIS 60 ++ RV+IL IAAFVVGTVEL+I G ++++A DL VS++AAGQL+T++S+VFAL PV+++ Sbjct: 5 LNFRVYILAIAAFVVGTVELIIGGTLDLVANDLGVSISAAGQLITIFSVVFALSGPVLLA 64 Query: 61 LTANMERRRLLIIAMCVFFAGNILSIISPNFTLLLISRVVLAASCSXXXXXXXXXXXXXX 120 LT ER++L ++A+ +F GNI+S S N+ +L+ SRV+ AAS S Sbjct: 65 LTGKFERKKLYVVALSIFLIGNIISAFSVNYEMLMFSRVICAASGSLIIALSVTLASSVV 124 Query: 121 PQALKGRAIGIIFMGLSAALMLGVPLGTWIGDRWGWRMTFXXXXXXXXXXXXCVQRFLPK 180 + RAIGIIFMG+S +L+LGVPLG +G+ +GWR F C+ FL K Sbjct: 125 EPHFRARAIGIIFMGISGSLVLGVPLGLVLGNAYGWRAPFVLISVLTVIAIACISLFLTK 184 Query: 181 TPPQPSVSLRTQLGTLKSSKILSVHLVSILQMTGQFTIYAYITPYLQTTMGLSAPIISLV 240 PP +S+R Q+ TLK KI+S L S L +TG T+YAY+TP+L+ M + A IS+ Sbjct: 185 VPPTSVLSIREQIATLKDKKIVSAQLTSFLFLTGHLTLYAYLTPFLKDVMHVEANWISVF 244 Query: 241 LLVYGLXXXXXXXXXXXXXDKLGPRKTIILTLVLHAAAILLLPYAVSNLFSLLLVVAVWC 300 ++G+ DK G +K+II +++ A AI +LP + ++++ +W Sbjct: 245 YFIFGIAAVLGGGLGGLLADKWGSKKSIISIIIVFACAIFMLPMMTFSFPLFIIMMGLWS 304 Query: 301 TFNMAPSPAIQSYLIETAPESADIQLSFNTSSLHIGVALGSMIGGFVVSQYSISVNPVXX 360 + A SPA Q+YLIE APESA IQ N S+LH+G+ALGS +GG V+ + S+ N Sbjct: 305 MLSWAISPAQQNYLIEIAPESAGIQQGLNNSALHLGIALGSTVGGVVIEESSVIYNAWVG 364 Query: 361 XXXXXXXXXXXXYSMTRKKNREAVEQ 386 +S+TR ++ + ++ Sbjct: 365 GVFIILALLCAIFSITRGRSNQLTKE 390 >C2SSA0.1 C2SSA0_BACCE Major facilitator superfamily MFS_1 Length = 394 Score = 295 bits (754), Expect = 7e-78, Method: Compositional matrix adjust. Identities = 155/386 (40%), Positives = 233/386 (60%) Query: 1 MDRRVWILTIAAFVVGTVELVIAGIIEMIAQDLQVSVAAAGQLVTVYSLVFALGSPVIIS 60 ++ RV+IL IAAFVVGTVEL+I G ++++A DL VS++AAGQL+T++S+VFAL PV+++ Sbjct: 5 LNFRVYILAIAAFVVGTVELIIGGTLDLVANDLGVSISAAGQLITIFSVVFALSGPVLLA 64 Query: 61 LTANMERRRLLIIAMCVFFAGNILSIISPNFTLLLISRVVLAASCSXXXXXXXXXXXXXX 120 LT ER++L ++A+ +F GNI+S S N+ +L+ SRV+ AAS S Sbjct: 65 LTGKFERKKLYVVALSIFLIGNIISAFSVNYEMLMFSRVICAASGSLIIALSVTLASSVV 124 Query: 121 PQALKGRAIGIIFMGLSAALMLGVPLGTWIGDRWGWRMTFXXXXXXXXXXXXCVQRFLPK 180 + RAIGIIFMG+S +L+LGVPLG +G+ +GWR F C+ FL K Sbjct: 125 EPHFRARAIGIIFMGISGSLVLGVPLGLVLGNAYGWRAPFVLISILTVMAIACISLFLTK 184 Query: 181 TPPQPSVSLRTQLGTLKSSKILSVHLVSILQMTGQFTIYAYITPYLQTTMGLSAPIISLV 240 PP +S+R Q+ TLK KI+S L S L +TG T+YAY+TP+L+ M + A IS+ Sbjct: 185 VPPTSVLSIREQIATLKDKKIVSAQLTSFLFLTGHLTLYAYLTPFLKDVMHVEANWISVF 244 Query: 241 LLVYGLXXXXXXXXXXXXXDKLGPRKTIILTLVLHAAAILLLPYAVSNLFSLLLVVAVWC 300 ++G+ DK G +K+II +++ A AI +LP + ++++ +W Sbjct: 245 YFIFGIAAVLGGGLGGWLADKWGSKKSIISIIIVFACAIFMLPMMTFSFPLFIIMMGLWS 304 Query: 301 TFNMAPSPAIQSYLIETAPESADIQLSFNTSSLHIGVALGSMIGGFVVSQYSISVNPVXX 360 + A SPA Q+YLIE APESA IQ N S+LH+G+ALGS +GG V+ + S+ N Sbjct: 305 MLSWAISPAQQNYLIEIAPESAGIQQGLNNSALHLGIALGSTVGGVVIEKSSVIYNAWVG 364 Query: 361 XXXXXXXXXXXXYSMTRKKNREAVEQ 386 +S+TR ++ + ++ Sbjct: 365 GVFIILALLCAIFSITRGRSNQLTKE 390 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.326 0.138 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,691,926,689 Number of extensions: 55591717 Number of successful extensions: 281699 Number of sequences better than 1.0e-05: 3376 Number of HSP's gapped: 279023 Number of HSP's successfully gapped: 3378 Length of query: 388 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 250 Effective length of database: 1,760,596,133 Effective search space: 440149033250 Effective search space used: 440149033250 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.7 bits) S2: 132 (55.5 bits)