BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0011.p (501 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1D5G2.1 B1D5G2_9BACL Extracellular solute-binding protein family 1 773 0.0 Q9S305.1 Q9S305_RUMFL Putative uncharacterized protein 538 e-151 B0KDG3.1 B0KDG3_THEP3 Extracellular solute-binding protein, fami... 202 7e-50 C4Z6T2.1 C4Z6T2_9FIRM Putative uncharacterized protein 197 3e-48 B0MRA2.1 B0MRA2_9FIRM Putative uncharacterized protein 192 6e-47 >B1D5G2.1 B1D5G2_9BACL Extracellular solute-binding protein family 1 Length = 472 Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust. Identities = 379/472 (80%), Positives = 403/472 (85%), Gaps = 2/472 (0%) Query: 32 MKSMKRVLVGISTMLVMTTALTACGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XX 89 MK MKR L+GIST+LVMTTAL ACG Sbjct: 1 MKRMKRALMGISTLLVMTTALAACGGNSNSNSNSNANSSSPSPTASETASTEPAKSDGKK 60 Query: 90 VTINLWSFTDEIPNMSKKYLETHPDANVEFKTTVIATTDGAYQPALDQALAAGGKDAPDI 149 VTINLWSFTDEIPNM+KKYLETHPDANVEFKTTVIATTDGAYQPALDQALA GGKDAPDI Sbjct: 61 VTINLWSFTDEIPNMTKKYLETHPDANVEFKTTVIATTDGAYQPALDQALAGGGKDAPDI 120 Query: 150 FAAEAAFVLKYTQGDASGYAANYADLGLDDQMVKDAGIAQYSVDIGSKDGQLKGLGYQAT 209 +AAEAAFVLKYTQGDAS YAANYADLGL DQMVKD GIAQYSVDIGSKDGQLKGL YQAT Sbjct: 121 YAAEAAFVLKYTQGDASTYAANYADLGLTDQMVKDGGIAQYSVDIGSKDGQLKGLAYQAT 180 Query: 210 GGAFIYRRSIAKDVFGSDDPATIKNEVGPGWEKFYEAAAKLKAKGYGIVSGDGDIWHAIE 269 GG FIYRRSIAKDVFG+DDPA IKNEVGPGW+K++ AA KLKAKGY IVSGDGDIWH IE Sbjct: 181 GGGFIYRRSIAKDVFGTDDPAAIKNEVGPGWDKYFAAADKLKAKGYAIVSGDGDIWHPIE 240 Query: 270 NSSEKGWIVDGKLHIDPKREEFLDLSKKLKDNGYHNDTTDWTEAWYADMSGSGAQPVFGF 329 NSS+KGW+VDGKLHIDPKRE+FLD SKKL DNGY N T DW EAWYADMSG+GA+PVFGF Sbjct: 241 NSSDKGWVVDGKLHIDPKREQFLDFSKKLTDNGYSNGTQDWQEAWYADMSGAGAKPVFGF 300 Query: 330 FGPAWLINYTMSGQVKDTNGDWAVTEPPTGFFWGGTWLLANKDVTKDDAKKQAVADFIKW 389 FGPAWLINY M QVKDTNGDWAVTEPPTGFFWGGTWLLANKDVTKDDAKK+AVADFI W Sbjct: 301 FGPAWLINYVMKDQVKDTNGDWAVTEPPTGFFWGGTWLLANKDVTKDDAKKKAVADFINW 360 Query: 390 VTLDTSETGLQYYWANGTMKEGEQGTKDSVASSVVMAKSNGEVPLLGGQNMFDVFVPANA 449 VTLDTSETGLQYYWANGTMKEGEQGTKDSVASSVVM+KSNGEV LLGGQNMFD FVPANA Sbjct: 361 VTLDTSETGLQYYWANGTMKEGEQGTKDSVASSVVMSKSNGEVALLGGQNMFDAFVPANA 420 Query: 450 NASGKNLTQYDETINKLWREQVREYTAGNKDRAKAIETFKQQVKDQLGIDSE 501 NA+GKNLTQYDE+IN +WR+QVR Y +G+K R A++ FKQ VKDQLGI+SE Sbjct: 421 NATGKNLTQYDESINLIWRDQVRAYASGSKSREAALKDFKQTVKDQLGIESE 472 >Q9S305.1 Q9S305_RUMFL Putative uncharacterized protein Length = 466 Score = 538 bits (1387), Expect = e-151, Method: Compositional matrix adjust. Identities = 274/423 (64%), Positives = 317/423 (74%), Gaps = 19/423 (4%) Query: 90 VTINLWSFTDEIPNMSKKYLETHPD--ANVEFKTTVIATTDGAYQPALDQALAAGGKDAP 147 INLW+FTDE+P M KKY+E +PD A E K T+I TTDG YQPALD+AL AGGKDAP Sbjct: 46 TVINLWTFTDEVPKMVKKYMEMNPDFAAQYEVKETIIPTTDGNYQPALDKALQAGGKDAP 105 Query: 148 DIFAAEAAFVLKYTQGDASGYAANYADLGLD-DQMVKDAGIAQYSVDIGSKDGQLK--GL 204 D + AEAAFVLKYTQGD S YAA Y DLG+D + + + IA YSVDIG+ K GL Sbjct: 106 DFYCAEAAFVLKYTQGDMSSYAAPYEDLGIDVENEINASKIAPYSVDIGTNPATNKVVGL 165 Query: 205 GYQATGGAFIYRRSIAKDVFGSDDPATIKNEVGPG---WEKFYEAAAKLKAKGYGIVSGD 261 GYQATGGAFIYRRS+AK FG+DDP+T+ ++G G W+KF++AA +LK KGY IVSGD Sbjct: 166 GYQATGGAFIYRRSVAKATFGTDDPSTVAEKIGAGSGSWDKFFDAAEELKGKGYAIVSGD 225 Query: 262 GDIWHAIENSSEKGWIVDGKLHIDPKREEFLDLSKKLKDNGYHNDTTDWTEAWYADMSGS 321 GDIWHA+ENSS+KGW+ KL ID KREEFLDLSKKLKDN YHNDT DW+EAW ADM G Sbjct: 226 GDIWHAVENSSDKGWMDGDKLFIDSKREEFLDLSKKLKDNNYHNDTEDWSEAWKADMRGE 285 Query: 322 GAQPVFGFFGPAWLINYTMSGQV------KDTNGDWAVTEPPTGFFWGGTWLLANKDVTK 375 G + V GFFGPAWLINYT++ + T GDWAV PP GFFWGGTWL+AN K Sbjct: 286 GDKEVLGFFGPAWLINYTIAENCGGKKPGEGTYGDWAVCAPPIGFFWGGTWLIAN----K 341 Query: 376 DDAKKQAVADFIKWVTLDTSETGLQYYWANGTMKEGEQGTKDSVASSVVMAKSNGEVPLL 435 D KK+AV I W+TLD+S+TGLQY WANGT+ G GTKD VAS+ VM KS+G + L Sbjct: 342 DSEKKEAVGKIIDWITLDSSDTGLQYMWANGTLN-GPGGTKDCVASNTVMEKSDGSLEFL 400 Query: 436 GGQNMFDVFVPANANASGKNLTQYDETINKLWREQVREYTAGNKDRAKAIETFKQQVKDQ 495 GGQNMFD FVPAN A+GKNLTQYDE IN WR QVR+YTAGNK R AI+ FKQ+V D Sbjct: 401 GGQNMFDAFVPANEYANGKNLTQYDEKINSSWRGQVRQYTAGNKSRDAAIKDFKQEVADN 460 Query: 496 LGI 498 LGI Sbjct: 461 LGI 463 >B0KDG3.1 B0KDG3_THEP3 Extracellular solute-binding protein, family 1 Length = 477 Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust. Identities = 150/507 (29%), Positives = 239/507 (47%), Gaps = 81/507 (15%) Query: 35 MKRVLVGISTMLVMTTALTACGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTINL 94 M+R++ I+ ++++ L+ CG + + Sbjct: 1 MRRIIALITIVIMVVGLLSGCGQNSQTGQSESTQPKEK------------------VLKI 42 Query: 95 WSFTDEIPNMSKKYLETHPDANVEFKTTVIATTDGAYQPALDQALAAGGKDAPDIFAAEA 154 WSFT+E + + E HPD +E+ T+I T+G YQ L AL +G D PD+ A EA Sbjct: 43 WSFTNEAKVFATAFKEKHPDVKIEY--TMIPMTEGEYQLKLKSALQSG--DVPDVVALEA 98 Query: 155 AFVLKYTQGDASGYAANYADLGLDDQMVKDAGIAQYSVDIGS-KDGQLKGLGYQATGGAF 213 +FV + + S Y A+ +DL K+ Q+++D+G+ ++G +K YQAT G Sbjct: 99 SFVRSFVE---SNYLADISDLL---PAAKELETYQFTIDMGTDQNGVIKAYSYQATPGVM 152 Query: 214 IYRRSIAKDVFGSDDPATIKNEVGPGWEKFYEAAAKLKAKGYG---IVSGDGDIWHAIEN 270 YRRS+AK FG+DDPA I+ E+ +KF EAA +K K G +V+ D + Sbjct: 153 YYRRSLAKLYFGTDDPAKIQ-ELMSDIDKFAEAAKIIKEKSNGNTYMVASTADFGNLFFA 211 Query: 271 SSEKGWIVDGKLHIDPKREEFLDLSKKLKDNGYHNDTTDWTEAWYADMSGS------GAQ 324 + + WIV+ KL IDP+ ++ D++K + NGY T W+E+W+A M+ S + Sbjct: 212 NRSQPWIVNNKLVIDPQIDKLFDIAKLFRQNGYEAQTQQWSESWFAGMNDSLVDAKGNPK 271 Query: 325 PVFGFFGPAWLINYTMSGQV------------KDTNGDWAVTEPPTGFFWGGTWLLANKD 372 VF +F P W ++Y + DT+GDWA+ P + WGGTW Sbjct: 272 QVFSYFLPTWGLSYVLQPNAVAKQNKEGKTVGHDTSGDWALIPGPLPYQWGGTWF----G 327 Query: 373 VTKDDAKKQAVADFIKWVTLDTSETGLQYYWANGTM-------------KEGEQGTKDSV 419 V KD + +FIK+ TL+ E L+ WA G + +Q D V Sbjct: 328 VPKDSKNIELAKEFIKFATLN--EETLK-NWALGVYTNEYLKKIDPSVGNDLKQPAGDFV 384 Query: 420 ASSVVM------AKSNGEVPLLGGQNMFDVFVPA----NANASGKNLTQYDETINKLWRE 469 +S V+ K +GGQN ++VF A + + KN+ D+ I + + Sbjct: 385 SSKKVVEELIPQMKDTPASKFVGGQNPYEVFAEAAKRIDLANTLKNIQGTDDVIQRALWD 444 Query: 470 QVREYTAGNKDRAKAIETFKQQVKDQL 496 + Y +G + +A++ FK VK+ L Sbjct: 445 PLDAYASGKVSKEEAVKQFKDNVKNAL 471 >C4Z6T2.1 C4Z6T2_9FIRM Putative uncharacterized protein Length = 451 Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 141/420 (33%), Positives = 218/420 (51%), Gaps = 47/420 (11%) Query: 92 INLWSFTDEIPNMSKKYLETHPDANVEFKTTVIATTDGAYQPALDQALA----AGGKDAP 147 +N++ + +E + + Y + P ++V+ + + AYQ ALD AL A D Sbjct: 43 LNIYCWNEEFKSRFEGYYKNVP-SDVKVNWVITPNENNAYQNALDAALLKQKDAAADDKI 101 Query: 148 DIFAAEAAFVLKYTQGDASGYAANYADLGLDDQMVKDAGIAQYSVDIGS-KDGQLKGLGY 206 D+F EA + LKY D Y + D+GL D +KD + QY+ DI + G+LK + Sbjct: 102 DMFLIEADYALKYVNSD---YTLDVKDVGLTDDDLKD--MYQYTKDIATDSKGKLKATTW 156 Query: 207 QATGGAFIYRRSIAKDVFGSDDPATIKNEVGPGWEKFYEAAAKLKAKGYGIVSGDGDIWH 266 QAT G F YRRSIAKDV G+DDP ++ E W+KF + A + AKGY ++SG D + Sbjct: 157 QATPGLFAYRRSIAKDVLGTDDPDKVQ-EALSTWDKFDKVAEQAAAKGYKMLSGYDDSYR 215 Query: 267 AIENSSEKGWI-VDGKLHIDPKREEFLDLSKKLKDNGYHNDTTDWTEAWYADMSGSGAQP 325 N+ W+ + K+ ID +++D +KK D GY+N ++ W W AD SG Sbjct: 216 VFSNNVSAPWVDSNNKIVIDDNIMKWVDQTKKYTDKGYNNKSSLWDSTWAADQGPSG--K 273 Query: 326 VFGFFGPAWLINYTMSGQ-----VKD---------TNGDWAVTEPPTGFFWGGTWLLANK 371 VFGFF W IN+T+ G VK+ GD+AV E P ++WGGTW+ A Sbjct: 274 VFGFFYSTWGINFTLLGNSLATPVKEGGKEEVGNGIYGDYAVCEGPQSYYWGGTWICAA- 332 Query: 372 DVTKDDAKKQAVADFIKWVTLDTSETGLQYYWANGTMKEGEQGTKDSVASSVVM---AKS 428 D+A V D +K + D + TMK+ + T+D ++ M A S Sbjct: 333 -AGTDNA--NLVKDVMKTLCCDKA-----------TMKKITEDTQDYTNTTSGMNEIANS 378 Query: 429 NGEVPLLGGQNMFDVFVPANANASGKNLTQYDETINKLWREQVREYTAGNKDRAKAIETF 488 + + LGGQN +F + S KN++ YD+ +N+ +++ +++Y GN + KA++ F Sbjct: 379 DFKSAFLGGQNHIKLFAKSAPKISMKNISSYDQGLNEEFQKAMKDYFDGNVTKDKALDNF 438 >B0MRA2.1 B0MRA2_9FIRM Putative uncharacterized protein Length = 489 Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust. Identities = 148/422 (35%), Positives = 218/422 (51%), Gaps = 46/422 (10%) Query: 91 TINLWSFTDEIPNMSKKYLETH-PD-ANVEFKTTVIATTDGAYQPALDQAL----AAGGK 144 T+N+ + +E N KYL+ P+ V FK T A + AYQ LD+ L AA Sbjct: 73 TLNIAVWNEEFENYFNKYLKDKLPEGVTVNFKKTENA--NNAYQNKLDEDLPKNEAASAD 130 Query: 145 DAPDIFAAEAAFVLKYTQGDASGYAANYADLGLDDQMVKDAGIAQYSVDIGS-KDGQ--L 201 D D+F EA + LKY S Y + LGL D+ + +G+ QY+ D+ + +DG L Sbjct: 131 DKIDMFLFEADYALKYVN---SEYTLDVKSLGLTDEDL--SGMYQYTKDVCTTQDGSKVL 185 Query: 202 KGLGYQATGGAFIYRRSIAKDVFGSDDPATIKNEVGPGWEKFYEAAAKLKAKGYGIVSGD 261 KG+ +QAT G + YRRSIAKDV G+DDP ++ E W KF E AAK KGY ++SG Sbjct: 186 KGVSWQATPGLYAYRRSIAKDVLGTDDPEKVQ-EALADWTKFDEVAAKAADKGYKMLSGY 244 Query: 262 GDIWHAIENSSEKGWIVDGK-LHIDPKREEFLDLSKKLKDNGYHNDTTDWTEAWYADMSG 320 D + N+ W+ D K + +D +++D +K D GY+N T+ WT+AW AD Sbjct: 245 DDAYRTFSNNVAAPWVNDNKEIIVDANIMKWVDQTKTYTDKGYNNKTSLWTDAWAADQGP 304 Query: 321 SGAQPVFGFFGPAWLINYTMSGQ---VKDTN-----------GDWAVTEPPTGFFWGGTW 366 G VFGFF W IN+T++G VK+ GDWAV P +FWGGTW Sbjct: 305 EG--KVFGFFYSTWGINFTLAGNSLAVKEKEGGKLEVGNGGYGDWAVCYGPQAYFWGGTW 362 Query: 367 LLANKDVTKDDAKKQAVADFIKWVTLDTSETGLQYYWANGTMKEGEQGTKDSVASSVVMA 426 L A K D+A V D +K + + G+Q+ + Q ++ A+ +A Sbjct: 363 LAAAKGT--DNA--ALVGDVMKAFCCN-KDFGVQF-------TKDTQDYYNNEAAMKELA 410 Query: 427 KSNGEVPLLGGQNMFDVFVPANANASGKNLTQYDETINKLWREQVREYTAGNKDRAKAIE 486 S+ + LGGQN +FV ++ YD+ +N+ ++ + +EY G D+ A++ Sbjct: 411 SSDFKSAFLGGQNHIALFVETAPKIDMSKISIYDQGLNETFQAKFKEYFDGTVDKDTALK 470 Query: 487 TF 488 F Sbjct: 471 NF 472 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.132 0.396 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,031,123,780 Number of extensions: 135413706 Number of successful extensions: 240886 Number of sequences better than 1.0e-05: 59 Number of HSP's gapped: 240777 Number of HSP's successfully gapped: 59 Length of query: 501 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 361 Effective length of database: 1,741,754,103 Effective search space: 628773231183 Effective search space used: 628773231183 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 133 (55.8 bits)