BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0006.p (789 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C1I528.1 C1I528_9CLOT ABC transporter 933 0.0 C3L2J1.1 C3L2J1_CLOB6 ABC transporter, ATP-binding/permease protein 921 0.0 B1QNQ0.1 B1QNQ0_CLOBO ABC transporter, ATP-binding/permease protein 919 0.0 B1Q714.1 B1Q714_CLOBO ABC transporter, ATP-binding/permease protein 915 0.0 A7GBU5.1 A7GBU5_CLOBL ABC transporter, ATP-binding/permease protein 912 0.0 >C1I528.1 C1I528_9CLOT ABC transporter Length = 783 Score = 933 bits (2411), Expect = 0.0, Method: Compositional matrix adjust. Identities = 470/800 (58%), Positives = 583/800 (72%), Gaps = 28/800 (3%) Query: 1 MLQLKNITKSYKTGDFTQVALDKVNLNFRESEFVAILGQSGSGKTTLLNIIGGLDQYDSG 60 ML LKNI KSY TG+F QVAL V+LNFR++EFVAILG SGSGKTT LNIIGGLD+YDSG Sbjct: 1 MLSLKNIKKSYVTGEFKQVALGGVSLNFRQNEFVAILGPSGSGKTTCLNIIGGLDKYDSG 60 Query: 61 ELVINGQSTEHFKDGDWDAYRNNSVGFIFQSYNLISHLSITDNVEMGMTLSGVTPAEKHR 120 +L+ING+ST FKD DWDAYRNNS+GFIFQSYNLISHLSI DNVEMGMTLSGV+ AEKH+ Sbjct: 61 DLIINGKSTREFKDSDWDAYRNNSIGFIFQSYNLISHLSILDNVEMGMTLSGVSSAEKHK 120 Query: 121 KALEVLEKVGLKEHVHKKPNQLSGGQMQRVAIARALANNPDIILADEPTGALDTETSEQI 180 KALE LE+VGLK+HVHK+PNQLSGGQMQRVAIARALAN+PDIILADEPTGALDT+TS QI Sbjct: 121 KALESLERVGLKDHVHKRPNQLSGGQMQRVAIARALANDPDIILADEPTGALDTKTSIQI 180 Query: 181 MELIKTIAEDKLVIMVTHNPELAESYADRVIRFSDGHAVSDSNPLANQKTSSSYKLKETS 240 M+LIK IA+DKLVIMVTHNPELA+ YADR++ F DG+ +SD+NPL ++K + SY LK+TS Sbjct: 181 MDLIKDIAKDKLVIMVTHNPELAKEYADRIVEFRDGNVISDTNPLESEKNNISYSLKKTS 240 Query: 241 MSFFTALKLSGKNIATKKWRTGLTAFXXXXXXXXXXXXXXXXNGFDKQINTYETGALSNF 300 MSF TALKLSG NI TKKWRT LTAF NGFDKQI+ +E+ LS F Sbjct: 241 MSFLTALKLSGMNIRTKKWRTFLTAFASSIGIIGIALILSLSNGFDKQIDIFESDTLSGF 300 Query: 301 PIQISQTPINV----------ELGPPAGKDSELP-SYPKEKKLYPYDPSENSSQHTNVLT 349 PI I+Q V E+ DSE YP +YPY+ EN+ HTN LT Sbjct: 301 PIMITQKAAEVDINSMMEHSKEMRKEMSGDSETEGKYPDTDVIYPYNTKENTFMHTNKLT 360 Query: 350 KEYIGYLNQIDPELIDGISYTRTVNMNVLVSDGDKATVLDKNNISFTAYPSKQGSEAGSY 409 +EYI Y+ +ID L+ G+SYTR VNMN+L SDG AT + ++++ ++YP K + Y Sbjct: 361 EEYIDYVEKIDSNLLSGVSYTRLVNMNLLKSDGKVATPVSVSDLNLSSYPIKLDNSTEGY 420 Query: 410 LEQYYDVLEGTFPAKPTDVVLIVDEYNRLTDAAVHALGLDYKAESIGLGDLIGKQLKLVM 469 LE YD+L G +P + TD+VL+VDEYN++ + ALG+D E I D+I +L+ ++ Sbjct: 421 LETSYDLLSGEYPKEMTDLVLVVDEYNKIDTTILDALGIDSNKEEINFNDIINHELRAIL 480 Query: 470 NNDYYRKNGGQFTVNGTAANIMDLYNSPKAVTLNIVGVLRGQEGSSISTLSPGIAYSDEL 529 NNDYY K G FT+ G +++ ++YN+ +A+ L I G+LR ++ +I LS G+AYSDEL Sbjct: 481 NNDYYTKVGNYFTLAGNPSDMSEIYNNERAIPLKITGILRLKKDVTIPVLSSGLAYSDEL 540 Query: 530 AASFIADAQKSEIVLAQEKADFNVLTGQALSDGVAGGGAAGTNPLMMXXXXXXXXXXXSL 589 + FI DA+ SE+ AQE AD+NV TG+ D V+ + Sbjct: 541 SKHFIEDAKNSEVAKAQEAADYNVFTGERF-DKVSDRPDSNNQN---------------- 583 Query: 590 TKEDVLASLGATDIPNSVSLYPIDFSAKESVTAYLDKWNEGRDTKDQVKYTDLAAIVTNI 649 TKE++L+S+GA P ++LYP DF+ KE+VT YLD WNEG++ +D V Y D+A+ ++ Sbjct: 584 TKENILSSIGAVGTPYMITLYPKDFTTKEAVTDYLDDWNEGKEKEDVVIYNDMASTFVSL 643 Query: 650 SGGIMDGITMVLVAFAAISLVVSLIMIGIITYISVMERTKEIGVLRALGARKKDITRVFN 709 SGGIMD ITMVL+AFAAISLVVSLIM+GIITYISV+ERTKEIGVLRALGARKKDITRVFN Sbjct: 644 SGGIMDAITMVLIAFAAISLVVSLIMVGIITYISVLERTKEIGVLRALGARKKDITRVFN 703 Query: 710 AETFIIGACSXXXXXXXXXXXXXPVNAILYNLTELSNVAQLNPLHALILGVISVGLTMIG 769 AETFI+G+CS P N ILY +T+L VA L+P+HA+IL VISV LTM+G Sbjct: 704 AETFIVGSCSGILGIIIAWLLTFPTNNILYKITDLKGVAVLDPVHAIILIVISVCLTMLG 763 Query: 770 GFIPAKMAAKKDPVTALRSE 789 G IPAKMA+KKDPV ALR+E Sbjct: 764 GSIPAKMASKKDPVEALRTE 783 >C3L2J1.1 C3L2J1_CLOB6 ABC transporter, ATP-binding/permease protein Length = 786 Score = 921 bits (2381), Expect = 0.0, Method: Compositional matrix adjust. Identities = 464/791 (58%), Positives = 588/791 (74%), Gaps = 7/791 (0%) Query: 1 MLQLKNITKSYKTGDFTQVALDKVNLNFRESEFVAILGQSGSGKTTLLNIIGGLDQYDSG 60 MLQ+K++ K Y TG+F Q ALD V+++FR+SEFVAILG SGSGKTTLLN++GGLDQYDSG Sbjct: 1 MLQIKDLKKVYTTGEFEQTALDGVSIDFRQSEFVAILGPSGSGKTTLLNMLGGLDQYDSG 60 Query: 61 ELVINGQSTEHFKDGDWDAYRNNSVGFIFQSYNLISHLSITDNVEMGMTLSGVTPAEKHR 120 +++ING ST+ F + DWD YRNNSVGFIFQSYNLI HLSI DNVEMGMTLSGV +EK + Sbjct: 61 DMIINGLSTKKFGESDWDTYRNNSVGFIFQSYNLIPHLSIVDNVEMGMTLSGVAKSEKRQ 120 Query: 121 KALEVLEKVGLKEHVHKKPNQLSGGQMQRVAIARALANNPDIILADEPTGALDTETSEQI 180 KA VLEKVGL H+HKKPNQLSGGQMQRVAIARALAN+P+IILADEPTGALDT+TSEQI Sbjct: 121 KATYVLEKVGLGNHIHKKPNQLSGGQMQRVAIARALANDPEIILADEPTGALDTQTSEQI 180 Query: 181 MELIKTIAEDKLVIMVTHNPELAESYADRVIRFSDGHAVSDSNPLANQKTSSSYKLKETS 240 M+LIK IA+DKLVIMVTHNPELAE YADR++ FSDG VSD+NP ++ + YK K+TS Sbjct: 181 MDLIKEIAKDKLVIMVTHNPELAEEYADRIVSFSDGKIVSDTNPYVSENNLNDYKPKKTS 240 Query: 241 MSFFTALKLSGKNIATKKWRTGLTAFXXXXXXXXXXXXXXXXNGFDKQINTYETGALSNF 300 M+FFTALKLSG NI TKKWRT LTAF NGF+KQIN +E +LSN+ Sbjct: 241 MNFFTALKLSGNNIVTKKWRTALTAFASSIGIIGVALVLSLSNGFNKQINEFEKDSLSNY 300 Query: 301 PIQISQTPINVELGPPA-GKDSELPSYPKEKKLYPYDPSENSSQHTNVLTKEYIGYLNQI 359 PI I Q + +E+ P + KD E +P E +YP+D SEN++ H N ++ EY+ Y+ +I Sbjct: 301 PISIEQNSMYLEMSPSSNSKDKEKTEFPNESMIYPHDSSENAAVHANAISTEYVDYIKKI 360 Query: 360 DPELIDGISYTRTVNMNVLVSDGDKATVLDKNNISFTAYPSKQGSEAGSYLEQYYDVLEG 419 D LI+GISYTR VNMN+L DK ++ + +F+ YPSK S YL+ YYDVL G Sbjct: 361 DSSLINGISYTRNVNMNILKKQDDKVVSMNTSAAAFSTYPSKGDSFQTDYLKSYYDVLAG 420 Query: 420 TFPAKPTDVVLIVDEYNRLTDAAVHALGLDYKAESIGLGDLIGKQLKLVMNNDYYRKNGG 479 ++P ++VL+VD+YN++ + + ALG +++I +IG + KL+ N+DYY ++G Sbjct: 421 SYPKNEKELVLVVDKYNQVDTSILEALGFSANSKNIDFDSMIGTEYKLIYNDDYYTQSGK 480 Query: 480 QFTVNGTAANIMDLYNSPKAVTLNIVGVLRGQEGSSISTLSPGIAYSDELAASFIADAQK 539 FTVNG N+ +LYN+ AVTL I G++R +E +++S LS GI YSD+LA FI +A+ Sbjct: 481 YFTVNGDTTNLENLYNNKNAVTLKISGIIRIKEDANVSNLSTGIVYSDQLAQDFIENAKN 540 Query: 540 SEIVLAQEKADFNVLTGQALSDGVAGGGAA-GTNPLMMXXXXXXXXXXXSLTKEDVLASL 598 S+IVLAQ++A +NV+ G L++ + AA P M TK+DVLASL Sbjct: 541 SKIVLAQQEAKYNVMNGNLLTEKTSTTTAAVHPTPNMTTNITSNVE-----TKDDVLASL 595 Query: 599 GATDIPNSVSLYPIDFSAKESVTAYLDKWNEGRDTKDQVKYTDLAAIVTNISGGIMDGIT 658 GAT P S+S+YP++F AK+++T YLD WN+ +DQ+ YTD+A+++T+++G IMDGIT Sbjct: 596 GATSSPTSISIYPVNFEAKDNITNYLDDWNKKLKEEDQIVYTDMASMITSLTGNIMDGIT 655 Query: 659 MVLVAFAAISLVVSLIMIGIITYISVMERTKEIGVLRALGARKKDITRVFNAETFIIGAC 718 +VLVAFA ISLVVS+IMIGII YISV+ERTKEIGVLRALGARKKDITRVFNAETFIIG C Sbjct: 656 IVLVAFAGISLVVSMIMIGIIIYISVLERTKEIGVLRALGARKKDITRVFNAETFIIGFC 715 Query: 719 SXXXXXXXXXXXXXPVNAILYNLTELSNVAQLNPLHALILGVISVGLTMIGGFIPAKMAA 778 S PVN+ILY T+L+NVAQLNPLHA+ L + S+ LTMIGG IP+KMAA Sbjct: 716 SGGLGIAITYLLTIPVNSILYKFTDLNNVAQLNPLHAIALVITSIVLTMIGGAIPSKMAA 775 Query: 779 KKDPVTALRSE 789 KKDPV ALRSE Sbjct: 776 KKDPVIALRSE 786 >B1QNQ0.1 B1QNQ0_CLOBO ABC transporter, ATP-binding/permease protein Length = 786 Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust. Identities = 463/791 (58%), Positives = 587/791 (74%), Gaps = 7/791 (0%) Query: 1 MLQLKNITKSYKTGDFTQVALDKVNLNFRESEFVAILGQSGSGKTTLLNIIGGLDQYDSG 60 MLQ+K++ K Y TG+F Q ALD V+++FR+SEFVAILG SGSGKTTLLN++GGLDQYDSG Sbjct: 1 MLQIKDLKKVYTTGEFEQTALDGVSIDFRQSEFVAILGPSGSGKTTLLNMLGGLDQYDSG 60 Query: 61 ELVINGQSTEHFKDGDWDAYRNNSVGFIFQSYNLISHLSITDNVEMGMTLSGVTPAEKHR 120 +++ING ST+ F + DWD YRNNSVGFIFQSYNLI HLSI DNVEMGMTLSGV +EK + Sbjct: 61 DMIINGLSTKKFGESDWDTYRNNSVGFIFQSYNLIPHLSIVDNVEMGMTLSGVAKSEKRQ 120 Query: 121 KALEVLEKVGLKEHVHKKPNQLSGGQMQRVAIARALANNPDIILADEPTGALDTETSEQI 180 KA VLEKVGL H+HKKPNQLSGGQMQRVAIARALAN+P+IILADEPTGALDT+TSEQI Sbjct: 121 KATYVLEKVGLGNHIHKKPNQLSGGQMQRVAIARALANDPEIILADEPTGALDTQTSEQI 180 Query: 181 MELIKTIAEDKLVIMVTHNPELAESYADRVIRFSDGHAVSDSNPLANQKTSSSYKLKETS 240 M+LIK IA+DKLVIMVTHNPELAE YADR++ FSDG VSD+NP ++ + YK K+TS Sbjct: 181 MDLIKEIAKDKLVIMVTHNPELAEEYADRIVSFSDGKIVSDTNPYVSENNLNDYKPKKTS 240 Query: 241 MSFFTALKLSGKNIATKKWRTGLTAFXXXXXXXXXXXXXXXXNGFDKQINTYETGALSNF 300 M+FFTALKLSG NI TKKWRT LTAF NGF+KQIN +E +LSN+ Sbjct: 241 MNFFTALKLSGNNIVTKKWRTALTAFASSIGIIGVALVLSLSNGFNKQINEFEKDSLSNY 300 Query: 301 PIQISQTPINVELGPPA-GKDSELPSYPKEKKLYPYDPSENSSQHTNVLTKEYIGYLNQI 359 PI I Q + +E+ P + KD E +P E +YP+D SEN++ H N ++ EY+ Y+ +I Sbjct: 301 PISIEQNSMYLEMSPSSNSKDKEKTEFPNESMIYPHDSSENAAVHANAISTEYVDYIKKI 360 Query: 360 DPELIDGISYTRTVNMNVLVSDGDKATVLDKNNISFTAYPSKQGSEAGSYLEQYYDVLEG 419 D LI+GISYTR VNMN+L DK ++ + +F+ YPSK S YL+ YYDVL G Sbjct: 361 DSSLINGISYTRNVNMNILKKQDDKVVSMNTSAAAFSTYPSKGDSFQTDYLKSYYDVLAG 420 Query: 420 TFPAKPTDVVLIVDEYNRLTDAAVHALGLDYKAESIGLGDLIGKQLKLVMNNDYYRKNGG 479 ++P ++VL+VD+YN++ + + ALG +++I +I + KL+ N+DYY ++G Sbjct: 421 SYPKNEKELVLVVDKYNQVDTSILEALGFSANSKNIDFDSMIRTEYKLIYNDDYYTQSGK 480 Query: 480 QFTVNGTAANIMDLYNSPKAVTLNIVGVLRGQEGSSISTLSPGIAYSDELAASFIADAQK 539 FTVNG N+ +LYN+ AVTL I G++R +E +++S LS GI YSD+LA FI +A+ Sbjct: 481 YFTVNGDTTNLENLYNNKNAVTLKISGIIRIKEDANVSNLSTGIVYSDQLAQDFIENAKN 540 Query: 540 SEIVLAQEKADFNVLTGQALSDGVAGGGAA-GTNPLMMXXXXXXXXXXXSLTKEDVLASL 598 S+IVLAQ++A +NV+ G L++ + AA P M TK+DVLASL Sbjct: 541 SKIVLAQQEAKYNVMNGNLLTEKTSTTTAAVHPTPNMTTNITSNVE-----TKDDVLASL 595 Query: 599 GATDIPNSVSLYPIDFSAKESVTAYLDKWNEGRDTKDQVKYTDLAAIVTNISGGIMDGIT 658 GAT P S+S+YP++F AK+++T YLD WN+ +DQ+ YTD+A+++T+++G IMDGIT Sbjct: 596 GATSSPTSISIYPVNFEAKDNITNYLDDWNKKLKEEDQIVYTDMASMITSLTGNIMDGIT 655 Query: 659 MVLVAFAAISLVVSLIMIGIITYISVMERTKEIGVLRALGARKKDITRVFNAETFIIGAC 718 +VLVAFA ISLVVS+IMIGII YISV+ERTKEIGVLRALGARKKDITRVFNAETFIIG C Sbjct: 656 IVLVAFAGISLVVSMIMIGIIIYISVLERTKEIGVLRALGARKKDITRVFNAETFIIGFC 715 Query: 719 SXXXXXXXXXXXXXPVNAILYNLTELSNVAQLNPLHALILGVISVGLTMIGGFIPAKMAA 778 S PVN+ILY T+L+NVAQLNPLHA+ L + S+ LTMIGG IP+KMAA Sbjct: 716 SGGLGIAITYLLTIPVNSILYKFTDLNNVAQLNPLHAIALVITSIVLTMIGGAIPSKMAA 775 Query: 779 KKDPVTALRSE 789 KKDPV ALRSE Sbjct: 776 KKDPVIALRSE 786 >B1Q714.1 B1Q714_CLOBO ABC transporter, ATP-binding/permease protein Length = 786 Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/791 (58%), Positives = 586/791 (74%), Gaps = 7/791 (0%) Query: 1 MLQLKNITKSYKTGDFTQVALDKVNLNFRESEFVAILGQSGSGKTTLLNIIGGLDQYDSG 60 MLQ+K++ K Y TG+F Q ALD V+++FR+SEFVAILG SGSGKTTLLN++GGLDQYDSG Sbjct: 1 MLQIKDLKKVYTTGEFKQTALDGVSIDFRQSEFVAILGPSGSGKTTLLNMLGGLDQYDSG 60 Query: 61 ELVINGQSTEHFKDGDWDAYRNNSVGFIFQSYNLISHLSITDNVEMGMTLSGVTPAEKHR 120 +++ING ST+ F + DWD YRNNSVGFIFQSYNLI HLSI DNVEMGMTLSGV +EK + Sbjct: 61 DMIINGLSTKKFGESDWDTYRNNSVGFIFQSYNLIPHLSIIDNVEMGMTLSGVPKSEKRQ 120 Query: 121 KALEVLEKVGLKEHVHKKPNQLSGGQMQRVAIARALANNPDIILADEPTGALDTETSEQI 180 KA VLEKVGL H+HKKPNQLSGGQMQRVAIARALAN+P+IILADEPTGALDT+TSEQI Sbjct: 121 KATYVLEKVGLGNHIHKKPNQLSGGQMQRVAIARALANDPEIILADEPTGALDTQTSEQI 180 Query: 181 MELIKTIAEDKLVIMVTHNPELAESYADRVIRFSDGHAVSDSNPLANQKTSSSYKLKETS 240 M+LIK IA+DKLVIMVTHNPELAE YADR++ FSDG VSD+NP ++ S+ YK K+TS Sbjct: 181 MDLIKEIAKDKLVIMVTHNPELAEEYADRIVSFSDGKIVSDTNPFVSENNSNDYKPKKTS 240 Query: 241 MSFFTALKLSGKNIATKKWRTGLTAFXXXXXXXXXXXXXXXXNGFDKQINTYETGALSNF 300 M+F TALKLSG NI TKKWRT LTAF NGF+KQIN +E +LSN+ Sbjct: 241 MNFLTALKLSGNNIVTKKWRTALTAFASSIGIIGVALVLSLSNGFNKQINEFEKDSLSNY 300 Query: 301 PIQISQTPINVELGPPA-GKDSELPSYPKEKKLYPYDPSENSSQHTNVLTKEYIGYLNQI 359 PI I Q +++ + P + KD E +P E +YPYD SEN++ H N ++ EY+ Y+ +I Sbjct: 301 PISIEQNSMSLGMSPSSKSKDKEKTEFPNESMIYPYDSSENAAVHANAISTEYVDYIKKI 360 Query: 360 DPELIDGISYTRTVNMNVLVSDGDKATVLDKNNISFTAYPSKQGSEAGSYLEQYYDVLEG 419 D LI+GISYTR VNMN+L K ++ + +F+ YPSK S Y + YYDVL G Sbjct: 361 DSSLINGISYTRNVNMNILKKQDGKVVSMNTSAAAFSTYPSKGDSFETDYFKSYYDVLAG 420 Query: 420 TFPAKPTDVVLIVDEYNRLTDAAVHALGLDYKAESIGLGDLIGKQLKLVMNNDYYRKNGG 479 ++P ++VL+VD+YN++ + + ALG +++I +IG + KL+ N+DYY ++G Sbjct: 421 SYPKNEKELVLVVDKYNQVDTSILEALGFSADSKNINFDSMIGTEYKLIYNDDYYTQSGK 480 Query: 480 QFTVNGTAANIMDLYNSPKAVTLNIVGVLRGQEGSSISTLSPGIAYSDELAASFIADAQK 539 FTVNG N+ +LYN+ AVTL I G++R +E +++S LS GI YSD+LA FI +A+ Sbjct: 481 YFTVNGDTTNLENLYNNKSAVTLKISGIIRIKEDANVSNLSTGIVYSDQLAQDFIENAKN 540 Query: 540 SEIVLAQEKADFNVLTGQALSDGVAGGGAA-GTNPLMMXXXXXXXXXXXSLTKEDVLASL 598 S+IVLAQ++A +NV+ G L++ + AA P M TK+DVLASL Sbjct: 541 SKIVLAQKEAKYNVMNGNLLTEKTSTTTAAVHPTPNMTTNITPNIE-----TKDDVLASL 595 Query: 599 GATDIPNSVSLYPIDFSAKESVTAYLDKWNEGRDTKDQVKYTDLAAIVTNISGGIMDGIT 658 GAT P S+S+YP++F AK+++T YLD WN+ +DQ+ YTD+A+++T+++G IMDGIT Sbjct: 596 GATSSPTSISIYPVNFEAKDNITNYLDDWNKKLKEEDQIVYTDMASMITSLTGNIMDGIT 655 Query: 659 MVLVAFAAISLVVSLIMIGIITYISVMERTKEIGVLRALGARKKDITRVFNAETFIIGAC 718 +VLVAFA ISLVVS+IMIGII YISV+ERTKEIGVLRALGARKKDITRVFNAETFIIG C Sbjct: 656 IVLVAFAGISLVVSMIMIGIIIYISVLERTKEIGVLRALGARKKDITRVFNAETFIIGFC 715 Query: 719 SXXXXXXXXXXXXXPVNAILYNLTELSNVAQLNPLHALILGVISVGLTMIGGFIPAKMAA 778 S PVN+ILY T+L+NVAQLNPLHA+ L + S+ LTMIGG IP+KMAA Sbjct: 716 SGGLGIAITYLLTIPVNSILYKFTDLNNVAQLNPLHAIALVITSIVLTMIGGAIPSKMAA 775 Query: 779 KKDPVTALRSE 789 KKDPV ALRSE Sbjct: 776 KKDPVIALRSE 786 >A7GBU5.1 A7GBU5_CLOBL ABC transporter, ATP-binding/permease protein Length = 786 Score = 912 bits (2358), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/790 (58%), Positives = 585/790 (74%), Gaps = 5/790 (0%) Query: 1 MLQLKNITKSYKTGDFTQVALDKVNLNFRESEFVAILGQSGSGKTTLLNIIGGLDQYDSG 60 MLQ+K++ K Y TG+F Q ALD V+++FR+SEFVAILG SGSGKTTLLN++GGLDQYDSG Sbjct: 1 MLQIKDLKKVYTTGEFKQTALDGVSIDFRQSEFVAILGPSGSGKTTLLNMLGGLDQYDSG 60 Query: 61 ELVINGQSTEHFKDGDWDAYRNNSVGFIFQSYNLISHLSITDNVEMGMTLSGVTPAEKHR 120 +++ING ST+ F + DWD YRNNSVGFIFQSYNLI HLSI DNVEMGMTLSGV +EK + Sbjct: 61 DMIINGLSTKKFGESDWDTYRNNSVGFIFQSYNLIPHLSIVDNVEMGMTLSGVPKSEKRQ 120 Query: 121 KALEVLEKVGLKEHVHKKPNQLSGGQMQRVAIARALANNPDIILADEPTGALDTETSEQI 180 KA VLEKVGL H+HKKPNQLSGGQMQRVAIARALAN+P+IILADEPTGALDT+TS+QI Sbjct: 121 KATYVLEKVGLGNHIHKKPNQLSGGQMQRVAIARALANDPEIILADEPTGALDTQTSQQI 180 Query: 181 MELIKTIAEDKLVIMVTHNPELAESYADRVIRFSDGHAVSDSNPLANQKTSSSYKLKETS 240 M+LIK IA+DKLVIMVTHNPELAE YADR++ FSDG VSD+NP ++ S+ YK K+TS Sbjct: 181 MDLIKEIAKDKLVIMVTHNPELAEEYADRIVSFSDGKIVSDTNPFVSENNSNDYKPKKTS 240 Query: 241 MSFFTALKLSGKNIATKKWRTGLTAFXXXXXXXXXXXXXXXXNGFDKQINTYETGALSNF 300 M+F TALKLSG NI TKKWRT LTAF NGF+KQIN +E +LSN+ Sbjct: 241 MNFLTALKLSGNNIVTKKWRTALTAFASSIGIIGVALVLSLSNGFNKQINEFEKDSLSNY 300 Query: 301 PIQISQTPINVELGPPA-GKDSELPSYPKEKKLYPYDPSENSSQHTNVLTKEYIGYLNQI 359 PI I Q +++ + P + KD E +P + +YPYD S+N++ H N ++ EY+ Y+ +I Sbjct: 301 PISIEQNSMSLGMSPSSKSKDKEKTEFPNKSMIYPYDSSKNATVHANAISTEYVDYIKKI 360 Query: 360 DPELIDGISYTRTVNMNVLVSDGDKATVLDKNNISFTAYPSKQGSEAGSYLEQYYDVLEG 419 D LI+GISYTR VNMN+L K ++ + +F+ YPSK S YL+ YYDVL G Sbjct: 361 DSSLINGISYTRNVNMNILKKQDGKVVSMNTSAAAFSTYPSKGDSFKTDYLKSYYDVLAG 420 Query: 420 TFPAKPTDVVLIVDEYNRLTDAAVHALGLDYKAESIGLGDLIGKQLKLVMNNDYYRKNGG 479 ++P ++VL+VD+YN++ + ALG +++I +IG + KL+ N+DYY ++G Sbjct: 421 SYPKNEKELVLVVDKYNQVDTNILEALGFSANSKNINFDSMIGTEYKLIYNDDYYTQSGK 480 Query: 480 QFTVNGTAANIMDLYNSPKAVTLNIVGVLRGQEGSSISTLSPGIAYSDELAASFIADAQK 539 FTVNG N+ +LYN+ AVTL I G++R +E +++S LS GI YSD+LA FI +A+ Sbjct: 481 YFTVNGDTTNLENLYNNKNAVTLKISGIIRIKEDANVSNLSTGIVYSDQLAQDFIENAKN 540 Query: 540 SEIVLAQEKADFNVLTGQALSDGVAGGGAAGTNPLMMXXXXXXXXXXXSLTKEDVLASLG 599 S+IVLAQ++A +NV+ G L++ + AA M TK+DVLASLG Sbjct: 541 SKIVLAQKEAKYNVMNGNLLTEKTSTTTAAVHGAPNMTTNITSNVE----TKDDVLASLG 596 Query: 600 ATDIPNSVSLYPIDFSAKESVTAYLDKWNEGRDTKDQVKYTDLAAIVTNISGGIMDGITM 659 AT P S+S+YP++F AK+++T YLD WN+ +DQ+ YTD+A+++T+++G IMDGIT+ Sbjct: 597 ATSSPTSISIYPVNFEAKDNITNYLDDWNKKLKEEDQIVYTDMASMITSLTGNIMDGITI 656 Query: 660 VLVAFAAISLVVSLIMIGIITYISVMERTKEIGVLRALGARKKDITRVFNAETFIIGACS 719 VLVAFA ISLVVS+IMIGII YISV+ERTKEIGVLRALGARKKDITRVFNAETFIIG CS Sbjct: 657 VLVAFAGISLVVSMIMIGIIIYISVLERTKEIGVLRALGARKKDITRVFNAETFIIGFCS 716 Query: 720 XXXXXXXXXXXXXPVNAILYNLTELSNVAQLNPLHALILGVISVGLTMIGGFIPAKMAAK 779 PVN+ILY T+L+NVAQLNPLHA+ L + S+ LTMIGG IP+KMAAK Sbjct: 717 GGLGIAITYLLTIPVNSILYKFTDLNNVAQLNPLHAIALVITSIVLTMIGGAIPSKMAAK 776 Query: 780 KDPVTALRSE 789 KDPV ALRSE Sbjct: 777 KDPVIALRSE 786 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.132 0.365 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 4,291,020,947 Number of extensions: 176998399 Number of successful extensions: 740130 Number of sequences better than 1.0e-05: 97719 Number of HSP's gapped: 608770 Number of HSP's successfully gapped: 106137 Length of query: 789 Length of database: 3,060,696,203 Length adjustment: 144 Effective length of query: 645 Effective length of database: 1,704,070,043 Effective search space: 1099125177735 Effective search space used: 1099125177735 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 135 (56.6 bits)