BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0193.0001.p (121 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KJ55.1 B3KJ55_9BACI Arsenate reductase (Thioredoxin) EC=3.1.3.48 222 1e-56 Q65IV4.1 ARSC_BACLD Protein arsC EC=1.20.4.- EC=3.1.3.48 221 2e-56 P45947.1 ARSC_BACSU Protein arsC EC=1.20.4.- EC=3.1.3.48 217 2e-55 Q2BBF0.1 Q2BBF0_9BACI ArsC 216 6e-55 B7GI01.1 B7GI01_ANOFW Protein phosphatase, low molecular weight ... 211 1e-53 >B3KJ55.1 B3KJ55_9BACI Arsenate reductase (Thioredoxin) EC=3.1.3.48 Length = 139 Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 102/121 (84%), Positives = 112/121 (92%) Query: 1 MAEGWAKKYLSDEWKVYSAGIEAHGLNPKAVKAMNEVGIDISGQTSDIIDPQLLGNADLV 60 MAEGWAKK+L D+W VYSAGIEAHGLNP AVKAMNE GIDIS QTSDIIDP LL +DLV Sbjct: 19 MAEGWAKKHLGDDWNVYSAGIEAHGLNPNAVKAMNEAGIDISKQTSDIIDPTLLNQSDLV 78 Query: 61 ITLCGDAADKCPVTPPQVRREHWGFDDPAKAQGTDEEKWAVFQRVRDQVGERIKRFAETG 120 +TLCGDAAD+CP+TPP VRREHWGFDDPAKAQGTDEEKWAVFQRVRDQ+GERI++FA+TG Sbjct: 79 VTLCGDAADRCPMTPPHVRREHWGFDDPAKAQGTDEEKWAVFQRVRDQIGERIQQFAKTG 138 Query: 121 E 121 E Sbjct: 139 E 139 >Q65IV4.1 ARSC_BACLD Protein arsC EC=1.20.4.- EC=3.1.3.48 Length = 139 Score = 221 bits (562), Expect = 2e-56, Method: Compositional matrix adjust. Identities = 103/121 (85%), Positives = 111/121 (91%) Query: 1 MAEGWAKKYLSDEWKVYSAGIEAHGLNPKAVKAMNEVGIDISGQTSDIIDPQLLGNADLV 60 MAEGWAKK+L DEW VYSAGIEAHGLNP AVKAM E GIDIS QTSDIIDP +L NADLV Sbjct: 19 MAEGWAKKHLGDEWNVYSAGIEAHGLNPNAVKAMREAGIDISEQTSDIIDPDILHNADLV 78 Query: 61 ITLCGDAADKCPVTPPQVRREHWGFDDPAKAQGTDEEKWAVFQRVRDQVGERIKRFAETG 120 ITLCGDAADKCP+TPP V+REHWGFDDPAKA+GT+EEKWA FQRVRD++GERIKRFAETG Sbjct: 79 ITLCGDAADKCPMTPPHVKREHWGFDDPAKAEGTEEEKWAFFQRVRDEIGERIKRFAETG 138 Query: 121 E 121 E Sbjct: 139 E 139 >P45947.1 ARSC_BACSU Protein arsC EC=1.20.4.- EC=3.1.3.48 Length = 139 Score = 217 bits (553), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 99/121 (81%), Positives = 110/121 (90%) Query: 1 MAEGWAKKYLSDEWKVYSAGIEAHGLNPKAVKAMNEVGIDISGQTSDIIDPQLLGNADLV 60 MAEGWAK+YL DEWKVYSAGIEAHGLNP AVKAM EVGIDIS QTSDIID +L NADLV Sbjct: 19 MAEGWAKQYLGDEWKVYSAGIEAHGLNPNAVKAMKEVGIDISNQTSDIIDSDILNNADLV 78 Query: 61 ITLCGDAADKCPVTPPQVRREHWGFDDPAKAQGTDEEKWAVFQRVRDQVGERIKRFAETG 120 +TLCGDAADKCP+TPP V+REHWGFDDPA+AQGT+EEKWA FQRVRD++G R+K FAETG Sbjct: 79 VTLCGDAADKCPMTPPHVKREHWGFDDPARAQGTEEEKWAFFQRVRDEIGNRLKEFAETG 138 Query: 121 E 121 + Sbjct: 139 K 139 >Q2BBF0.1 Q2BBF0_9BACI ArsC Length = 139 Score = 216 bits (550), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 98/121 (80%), Positives = 111/121 (91%) Query: 1 MAEGWAKKYLSDEWKVYSAGIEAHGLNPKAVKAMNEVGIDISGQTSDIIDPQLLGNADLV 60 MAEGWAK++LSDEW VYSAGIEAHGLNP AVKAM E GIDIS QTSDIID ++L NADLV Sbjct: 19 MAEGWAKQHLSDEWNVYSAGIEAHGLNPNAVKAMKEAGIDISNQTSDIIDTEILNNADLV 78 Query: 61 ITLCGDAADKCPVTPPQVRREHWGFDDPAKAQGTDEEKWAVFQRVRDQVGERIKRFAETG 120 +TLCGDAADKCP+TPP V+REHWGFDDPAKA+GT+EEKWA FQRVRD++G+RIK FAETG Sbjct: 79 VTLCGDAADKCPMTPPHVKREHWGFDDPAKAEGTEEEKWAFFQRVRDEIGDRIKTFAETG 138 Query: 121 E 121 + Sbjct: 139 K 139 >B7GI01.1 B7GI01_ANOFW Protein phosphatase, low molecular weight phosphatase family Length = 138 Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 97/121 (80%), Positives = 108/121 (89%) Query: 1 MAEGWAKKYLSDEWKVYSAGIEAHGLNPKAVKAMNEVGIDISGQTSDIIDPQLLGNADLV 60 MAEGWAKKYL DEW+VYSAGIEAHGLNP AVKAM E+GIDIS QTSD+I+ +L ADLV Sbjct: 18 MAEGWAKKYLGDEWEVYSAGIEAHGLNPNAVKAMKEIGIDISNQTSDVINEDILNRADLV 77 Query: 61 ITLCGDAADKCPVTPPQVRREHWGFDDPAKAQGTDEEKWAVFQRVRDQVGERIKRFAETG 120 +TLCG AAD CPVTPP V+R HWGFDDPAKA+GT+EEKWAVFQRVRD++G RIKRFAETG Sbjct: 78 VTLCGHAADHCPVTPPHVKRVHWGFDDPAKAEGTEEEKWAVFQRVRDEIGARIKRFAETG 137 Query: 121 E 121 E Sbjct: 138 E 138 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.134 0.416 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 816,918,759 Number of extensions: 33277804 Number of successful extensions: 59664 Number of sequences better than 1.0e-05: 689 Number of HSP's gapped: 59500 Number of HSP's successfully gapped: 689 Length of query: 121 Length of database: 3,060,696,203 Length adjustment: 87 Effective length of query: 34 Effective length of database: 2,241,067,898 Effective search space: 76196308532 Effective search space used: 76196308532 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 126 (53.1 bits)