BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0190.0011.p (633 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDY2.1 B3KDY2_9BACI Putative uncharacterized protein 397 e-108 C0Z8R0.1 C0Z8R0_BREBN Putative uncharacterized protein 342 6e-92 A5N8S3.1 A5N8S3_CLOK5 Putative uncharacterized protein 190 3e-46 B9E271.1 B9E271_CLOK1 Putative uncharacterized protein 190 4e-46 B3KDY1.1 B3KDY1_9BACI Putative uncharacterized protein 82 1e-13 >B3KDY2.1 B3KDY2_9BACI Putative uncharacterized protein Length = 443 Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust. Identities = 208/429 (48%), Positives = 285/429 (66%), Gaps = 11/429 (2%) Query: 2 IAQQMYTRERRGVYRATEGFDTVAKSESLDNNFVKKILHPFCLYDAPAELAARGEKNEEL 61 I QQMYTRERRG++R+ EGFDTVA+S L+ +F+KK+LHPFC Y+APAEL AR E++ Sbjct: 9 IQQQMYTRERRGIFRSAEGFDTVARSSGLEASFIKKVLHPFCQYEAPAELTARSERDAAS 68 Query: 62 YPAALHLFHTETNDTVIGQSRYLAADFTGQRSAFFAHNFVVPPIRSEEILEGYGDWLHAD 121 YPAALHLFHTE+ +TV+G+S + ADFTG RSAFF H++V+P + Y WL A Sbjct: 69 YPAALHLFHTESGETVLGRSVFQPADFTGLRSAFFTHHYVIPEGFHRDDHNAYRTWLQAA 128 Query: 122 FAGSYAGELGGTLPELSAIPVS-------QREQKPHPLSILRGLGITEELFKTLLQAVMI 174 FA Y E G LP+L AIPV E+ P ++L+ LGI E++FK L+ A + Sbjct: 129 FADHYDIEEGVDLPQLPAIPVQADSRAAVSSERTP---ALLQELGIDEKVFKQLIYACIS 185 Query: 175 SVAGKKKLYIALDVPIGELSRRAVELTEVLFRALPYDFRRRLGVITYANEPKSRKYIHLT 234 + AGKKK+YI LDVP+ +LS +A +L VLF LPY RR LG +TYA EP+S+K +HL Sbjct: 186 AAAGKKKVYIVLDVPVEQLSAKAEQLLFVLFGRLPYALRRVLGFVTYAKEPQSKKGLHLM 245 Query: 235 FVEKGSLRPGDRSIEKDFVFDLAAGRVLGADFGDTQQPFAELAWKTLQEPERGLEDFARF 294 FVEKGSLR DRSIEKD++F+LAAGRV+ AD ++QP+ + AW TL +P+R E F F Sbjct: 246 FVEKGSLRLNDRSIEKDYLFELAAGRVINADLKWSEQPYLDFAWDTLLDPDRS-ERFFAF 304 Query: 295 ADSLLPGESVERKLSLALYNELAVFYEIEQGNESLYTGNKQAVLGGLLAYLKPEGALEAR 354 A+ +L ++SL Y++L + ++IE+G+E LY +K AVL L YL+P GAL+A+ Sbjct: 305 AEQMLTDMEPIHQISLDSYDDLCMLFQIEEGHEGLYHEHKHAVLRASLLYLQPAGALDAK 364 Query: 355 VRLNDMFLERFDREYDLIRQKGVPVPEIMERFVEYFALKGHNYRVKIVDYFINGMLNAQS 414 RL+ +FL F +E++L++ VP I +Y + + IV+YFI + NA S Sbjct: 365 QRLDQLFLALFAKEFELVKGGHVPDAAIAGFLKDYHGINPRQHNDWIVEYFIRSLNNALS 424 Query: 415 AGREDALAA 423 R+D A Sbjct: 425 KQRQDTTMA 433 >C0Z8R0.1 C0Z8R0_BREBN Putative uncharacterized protein Length = 832 Score = 342 bits (878), Expect = 6e-92, Method: Compositional matrix adjust. Identities = 201/567 (35%), Positives = 311/567 (54%), Gaps = 22/567 (3%) Query: 2 IAQQMYTRERRGVYRATEGFDTVAKSESLDNNFVKKILHPFCLYDAPAELAARGEKNEEL 61 I QQ YTR R+GV+R+ EG+DTVAK+ LDN F+KK LHPFC+YDAP +L R E N L Sbjct: 7 ILQQYYTRGRQGVFRSNEGYDTVAKTPGLDNQFIKKTLHPFCVYDAPRQLQERAESNLSL 66 Query: 62 YPAALHLFHTETNDTVIGQSRYLAADFTGQRSAFFAHNFVVPPIRSEEILEGYGDWLHA- 120 +P AL F E+ + V+G+S ++ ADFTGQR+ FF+HN+V+P R +E ++ Sbjct: 67 FPEALVSFQAESGEMVLGRSVFVGADFTGQRNTFFSHNYVIPVERRDEFIKNPSKIFGVR 126 Query: 121 DFAGSYAGELGGTLPELSAIPVSQREQKPHPLSILRGLGITEELFKTLLQAVMISVAGKK 180 FA + G +P + IP S++ +L LG+ E LFK LL AVM S+A KK Sbjct: 127 TFADRHDDAAGKEIPTVDDIP-SEKGLPQDRKQLLGQLGVDERLFKQLLFAVMSSLAAKK 185 Query: 181 KLYIALDVPIGELSRRAVELTEVLFRALPYDFRRRLGVITYANEPKSRKYIHLTFVEKGS 240 K++I+LDV I S+ A L E+L+ LPY+ RR G +T++NEP+S+K+IH+TFVEKGS Sbjct: 186 KVFISLDVDISASSKSAAHLLEILYSCLPYEMRRHFGFLTFSNEPQSKKHIHVTFVEKGS 245 Query: 241 LRPGDRSIEKDFVFDLAAGRVLGADFGDTQQPFAELAWKTLQEPERGLEDFARFADSLLP 300 LRPG +KDF+FD + GRV D D + + AW+ + EP R L+ F F + +L Sbjct: 246 LRPGGGHSDKDFLFDFSLGRVQNVDLQDGGHEYLDFAWEYVNEP-RVLDAFLDFCEDVLA 304 Query: 301 GESVERKLSLALYNELAVFYEIEQGNESLYTGNKQAVLGGLLAYLKPEGALEARVRLNDM 360 G L+L Y EL Y IE+G S+Y + V L +YL +L + RL ++ Sbjct: 305 GADHALALNLRTYYELCALYLIEKGRTSVYESKRAGVWQALNSYLG-HSSLTRKKRLIEL 363 Query: 361 FLERFDREYDLIRQKGVPVPEIMERFVE-YFALKGHNYRVKIVDYFINGMLNAQSAGRED 419 E + + K +P E +++ +E Y K ++ ++ + ++ ++ A++A + Sbjct: 364 QEMLMRIEIEALSSKRLPDGETIKQIIESYRVTKQERLQMDLIRFLMDVLMKAKTARQSS 423 Query: 420 ALAAAYGIIESNDELSASFFKRVLAQPVFRRALLEPYMESRLSAAASPADILRFVTHWGR 479 +A Y + SN EL + + P + L E YM R+SA S +L+ + W Sbjct: 424 YVAEVYKHLSSNRELFGFMMRTIFGYPQLVKPLFEDYMTERVSAVTSLDQMLKEIRFWSE 483 Query: 480 FLPEALQQSFVRDTVKEYLLEKLQQSPNPVGEVAAIH---DSVDKAEKERRRGSGMYPEV 536 P+A++ + T E +L + + IH +++D A RG Sbjct: 484 TEPQAIRNAVFIATTTEKVLRLFARERQKLAAAITIHQFFENIDGA-----RGYA----- 533 Query: 537 LLLLEELMTASDRFLLNRVSLEELTQE 563 +EL+ D+ L+ V+L+ L+++ Sbjct: 534 ----DELLDELDKSLMKLVALDTLSKD 556 >A5N8S3.1 A5N8S3_CLOK5 Putative uncharacterized protein Length = 353 Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 120/361 (33%), Positives = 196/361 (54%), Gaps = 25/361 (6%) Query: 1 MIAQQMYTRERRGVYRATEGFDTVAKSESLDNNFVKKILHPFCLYDAPAELAARGEKNEE 60 MI Q YTR+R+GV+ T G+DTVAKS L+N F+ L C Y+APA LA GE+N Sbjct: 1 MIEQHYYTRDRKGVFSETPGYDTVAKSSGLENEFIINTLQNLCFYEAPASLA--GEENVF 58 Query: 61 LYPAALHLFHTETNDTVIGQSRYLAADFTGQRSAFFAHNFVVPPIRSEEILEGYGDWLHA 120 YPAAL +T N +IGQS + D+TGQR+ +F H++++P E +E ++A Sbjct: 59 KYPAALFCANT-GNKMIIGQSVFGGKDYTGQRNRYFTHSYIIPEEERENYIENPEKIIYA 117 Query: 121 D-FAGSYAGELGGTLPELSAIPVSQREQKPHPL-SILRGLGITEELFKTLLQAVMISVAG 178 FA Y E G TL ++S IP++ ++ + + + GI ++F L++A SV Sbjct: 118 SGFARDYDIEEGNTLEQISKIPLNTQDDCFNSIEDMFSDTGINIKIFVYLIKACFKSVKY 177 Query: 179 KKKLYIALDVPIGELSRRAVELTEVLFRALPYDFRRRLGVITYANEPKSRKYIHLTFVEK 238 +K+YI LDV ++ + + + L+R LP++ RR LG ITY EPK + I++ F+ + Sbjct: 178 CRKIYILLDVDYSHINVTSKGILKYLYRVLPFEVRRNLGFITYMKEPKIKDSINIIFLAR 237 Query: 239 GSLRPGDRSIEKDFVFDLAAGRVLGADFGDTQQPFAELAWKTLQEPERGLEDFARFADSL 298 GS++ I+ +VFDL+ D + F E +++ E+ L++F DS+ Sbjct: 238 GSIKRLSTEIKAGYVFDLSKEDFYLDDIDHEKHEFIEFVMDSIENIEK-LKNFFFRVDSV 296 Query: 299 LP-------------GESVERKLSLALYNELAVFYEIEQGNESLYTGNKQAVLGGLLAYL 345 L E +E++ ++L E++V I++ + S + + +L LA+L Sbjct: 297 LLEDRLDIYKYDGFFKEPIEKEKEVSL--EISVEPLIDKNSNSFF----KNILKKFLAFL 350 Query: 346 K 346 K Sbjct: 351 K 351 >B9E271.1 B9E271_CLOK1 Putative uncharacterized protein Length = 359 Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust. Identities = 120/361 (33%), Positives = 196/361 (54%), Gaps = 25/361 (6%) Query: 1 MIAQQMYTRERRGVYRATEGFDTVAKSESLDNNFVKKILHPFCLYDAPAELAARGEKNEE 60 MI Q YTR+R+GV+ T G+DTVAKS L+N F+ L C Y+APA LA GE+N Sbjct: 7 MIEQHYYTRDRKGVFSETPGYDTVAKSSGLENEFIINTLQNLCFYEAPASLA--GEENVF 64 Query: 61 LYPAALHLFHTETNDTVIGQSRYLAADFTGQRSAFFAHNFVVPPIRSEEILEGYGDWLHA 120 YPAAL +T N +IGQS + D+TGQR+ +F H++++P E +E ++A Sbjct: 65 KYPAALFCANT-GNKMIIGQSVFGGKDYTGQRNRYFTHSYIIPEEERENYIENPEKIIYA 123 Query: 121 D-FAGSYAGELGGTLPELSAIPVSQREQKPHPL-SILRGLGITEELFKTLLQAVMISVAG 178 FA Y E G TL ++S IP++ ++ + + + GI ++F L++A SV Sbjct: 124 SGFARDYDIEEGNTLEQISKIPLNTQDDCFNSIEDMFSDTGINIKIFVYLIKACFKSVKY 183 Query: 179 KKKLYIALDVPIGELSRRAVELTEVLFRALPYDFRRRLGVITYANEPKSRKYIHLTFVEK 238 +K+YI LDV ++ + + + L+R LP++ RR LG ITY EPK + I++ F+ + Sbjct: 184 CRKIYILLDVDYSHINVTSKGILKYLYRVLPFEVRRNLGFITYMKEPKIKDSINIIFLAR 243 Query: 239 GSLRPGDRSIEKDFVFDLAAGRVLGADFGDTQQPFAELAWKTLQEPERGLEDFARFADSL 298 GS++ I+ +VFDL+ D + F E +++ E+ L++F DS+ Sbjct: 244 GSIKRLSTEIKAGYVFDLSKEDFYLDDIDHEKHEFIEFVMDSIENIEK-LKNFFFRVDSV 302 Query: 299 LP-------------GESVERKLSLALYNELAVFYEIEQGNESLYTGNKQAVLGGLLAYL 345 L E +E++ ++L E++V I++ + S + + +L LA+L Sbjct: 303 LLEDRLDIYKYDGFFKEPIEKEKEVSL--EISVEPLIDKNSNSFF----KNILKKFLAFL 356 Query: 346 K 346 K Sbjct: 357 K 357 >B3KDY1.1 B3KDY1_9BACI Putative uncharacterized protein Length = 541 Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 44/131 (33%), Positives = 76/131 (58%) Query: 442 VLAQPVFRRALLEPYMESRLSAAASPADILRFVTHWGRFLPEALQQSFVRDTVKEYLLEK 501 +L P + +PYM++R+ AA+PAD++ + W R P L+Q + L++K Sbjct: 1 MLTSPGLPALMFDPYMKTRMKQAATPADLVDLIGLWVRNHPLLLEQENYVRLAEAQLIDK 60 Query: 502 LQQSPNPVGEVAAIHDSVDKAEKERRRGSGMYPEVLLLLEELMTASDRFLLNRVSLEELT 561 LQQ +PV V A+ D +D E++ ++G G Y + ++ A++ FLL + E+L+ Sbjct: 61 LQQDSDPVRTVNAVLDQLDALERDPQKGIGRYQGGRAFADRMIYAANLFLLRELEPEQLS 120 Query: 562 QEQLLDISFLR 572 Q+QL+DI FL+ Sbjct: 121 QKQLMDIGFLQ 131 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.138 0.398 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,524,474,384 Number of extensions: 149487177 Number of successful extensions: 371762 Number of sequences better than 1.0e-05: 5 Number of HSP's gapped: 371753 Number of HSP's successfully gapped: 5 Length of query: 633 Length of database: 3,060,696,203 Length adjustment: 142 Effective length of query: 491 Effective length of database: 1,722,912,073 Effective search space: 845949827843 Effective search space used: 845949827843 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 135 (56.6 bits)