BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0190.0009.p (196 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KDY5.1 B3KDY5_9BACI Putative uncharacterized protein 236 1e-60 C0Z8R2.1 C0Z8R2_BREBN Putative uncharacterized protein 164 5e-39 B9E273.1 B9E273_CLOK1 Putative uncharacterized protein 157 4e-37 A5N8S5.1 A5N8S5_CLOK5 Putative uncharacterized protein 157 4e-37 >B3KDY5.1 B3KDY5_9BACI Putative uncharacterized protein Length = 213 Score = 236 bits (601), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 112/196 (57%), Positives = 146/196 (74%), Gaps = 2/196 (1%) Query: 1 VSSRVEDRFCTLRWRWPDGVQAVCIHKAPAEA--ADSGELPPSGMKLYTREEYKANNGYR 58 +S +++D +CTLRW WP G+QAV IH+A + +G+ P GM+LYTR+EYKANNGYR Sbjct: 16 LSYQLDDGYCTLRWSWPPGLQAVYIHRAMDDGFGQPAGDSQPGGMRLYTRDEYKANNGYR 75 Query: 59 DRLDDIGLVAYTVYARLADGTDTLLVRQRDGANRTLVSAGKARIYYSIQQKKSLFGKQKT 118 DRLD IG + YTVYA ++ + L+RQ D +NR S GKA++ YSI++K KT Sbjct: 76 DRLDGIGQITYTVYALSSEDGEMALIRQEDESNRIRFSTGKAKLVYSIREKSRWLQPYKT 135 Query: 119 VHMTITAEVPVSKEVLCYVKKRGGFPASKEDGVLFPFVQDFAAGRNILPPIEIGKEDAVR 178 + + +TAEVPV KE LCYVKK+G +P +KEDG+L+PFV+DFAAGRN LP IE+GK D VR Sbjct: 136 IEIQVTAEVPVPKEALCYVKKQGAYPVNKEDGILYPFVRDFAAGRNDLPAIEVGKNDYVR 195 Query: 179 IFFTDGRKYGIFYELV 194 +FFTDG+KYG YELV Sbjct: 196 LFFTDGKKYGQRYELV 211 >C0Z8R2.1 C0Z8R2_BREBN Putative uncharacterized protein Length = 211 Score = 164 bits (414), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 84/188 (44%), Positives = 118/188 (62%), Gaps = 3/188 (1%) Query: 11 TLRWRWPDGVQAVCIHKAPAEAA-DSGELPPSGMKLYTREEYKANNGYRDRLDDIGLVAY 69 L W W + V +HK+ A D EL KLYTREEYK + G R++ D IG Y Sbjct: 25 VLNWHWAQDIPCVYVHKSQFGAPFDISELDDRQFKLYTREEYKVHKGLREKTDGIGRYTY 84 Query: 70 TVY-ARLADGTDTLLVRQRDGANRTLVSAGKARIYYSIQQKKSLFGKQKTVHMTITAEVP 128 ++ RL G LL+ D A+ VS GKA+IYYS ++ S F K +++ + I +E+P Sbjct: 85 RIFPCRLESGKPLLLMPDGD-AHVVHVSTGKAKIYYSFKRGGSWFSKYQSLQIRIFSEIP 143 Query: 129 VSKEVLCYVKKRGGFPASKEDGVLFPFVQDFAAGRNILPPIEIGKEDAVRIFFTDGRKYG 188 ++++VLCYVKK G PA K+DG + F++D G N++P IE+ K+D VR+FFTDG+KYG Sbjct: 144 IARDVLCYVKKEGSPPAHKDDGTRYNFIRDLEPGVNLMPEIEVRKKDVVRLFFTDGKKYG 203 Query: 189 IFYELVPE 196 YEL+PE Sbjct: 204 EMYELIPE 211 >B9E273.1 B9E273_CLOK1 Putative uncharacterized protein Length = 215 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 76/192 (39%), Positives = 118/192 (61%), Gaps = 5/192 (2%) Query: 6 EDRFCTLRWRWPDGVQAVCIHKAPA-EAADSGELPPSGMKLYTREEYKANNGYRDRLDDI 64 +D+F T+RWRWP + V I K + +L S +KLYTREEY+ NGY + + +I Sbjct: 22 KDKF-TIRWRWPGNIDIVYIVKTNTLDNFSLDDLDESNIKLYTREEYREFNGYFEVVKEI 80 Query: 65 GLVAYTVYARLADGTDTLLVRQRDGANRTLVSAGKARIYYSIQQKKSL---FGKQKTVHM 121 Y ++ + LL +Q++G N+ L++ GK IYY I+Q KSL F K+K + + Sbjct: 81 SQYTYYIFPAALKEDEILLFKQQNGKNKVLINTGKPEIYYEIKQLKSLKNFFSKEKVLQI 140 Query: 122 TITAEVPVSKEVLCYVKKRGGFPASKEDGVLFPFVQDFAAGRNILPPIEIGKEDAVRIFF 181 I +E ++K+VLCYVKK +P ++EDG+ F F+ + +AG+NI+P I++ K + V++F Sbjct: 141 IIDSETALNKDVLCYVKKSNSYPINREDGIAFDFIDNISAGKNIMPEIKVNKNEYVKVFI 200 Query: 182 TDGRKYGIFYEL 193 D KYG Y L Sbjct: 201 KDVNKYGNAYTL 212 >A5N8S5.1 A5N8S5_CLOK5 Putative uncharacterized protein Length = 215 Score = 157 bits (398), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 76/192 (39%), Positives = 118/192 (61%), Gaps = 5/192 (2%) Query: 6 EDRFCTLRWRWPDGVQAVCIHKAPA-EAADSGELPPSGMKLYTREEYKANNGYRDRLDDI 64 +D+F T+RWRWP + V I K + +L S +KLYTREEY+ NGY + + +I Sbjct: 22 KDKF-TIRWRWPGNIDIVYIVKTNTLDNFSLDDLDESNIKLYTREEYREFNGYFEVVKEI 80 Query: 65 GLVAYTVYARLADGTDTLLVRQRDGANRTLVSAGKARIYYSIQQKKSL---FGKQKTVHM 121 Y ++ + LL +Q++G N+ L++ GK IYY I+Q KSL F K+K + + Sbjct: 81 SQYTYYIFPAALKEDEILLFKQQNGKNKVLINTGKPEIYYEIKQLKSLKNFFSKEKVLQI 140 Query: 122 TITAEVPVSKEVLCYVKKRGGFPASKEDGVLFPFVQDFAAGRNILPPIEIGKEDAVRIFF 181 I +E ++K+VLCYVKK +P ++EDG+ F F+ + +AG+NI+P I++ K + V++F Sbjct: 141 IIDSETALNKDVLCYVKKSNSYPINREDGIAFDFIDNISAGKNIMPEIKVNKNEYVKVFI 200 Query: 182 TDGRKYGIFYEL 193 D KYG Y L Sbjct: 201 KDVNKYGNAYTL 212 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.138 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,208,108,600 Number of extensions: 49502957 Number of successful extensions: 103521 Number of sequences better than 1.0e-05: 4 Number of HSP's gapped: 103516 Number of HSP's successfully gapped: 4 Length of query: 196 Length of database: 3,060,696,203 Length adjustment: 129 Effective length of query: 67 Effective length of database: 1,845,385,268 Effective search space: 123640812956 Effective search space used: 123640812956 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 127 (53.5 bits)