BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0188.0096.p
         (152 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KKJ8.1 B3KKJ8_9BACI Putative uncharacterized protein                220   3e-56
B1DK04.1 B1DK04_9BACL Putative uncharacterized protein                176   4e-43
C0ZIF1.1 C0ZIF1_BREBN Putative uncharacterized protein                149   8e-35
Q67JP2.1 Q67JP2_SYMTH Putative uncharacterized protein                142   1e-32
B2A4A6.1 B2A4A6_NATTJ Putative uncharacterized protein                138   2e-31

>B3KKJ8.1 B3KKJ8_9BACI Putative uncharacterized protein
          Length = 131

 Score =  220 bits (560), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 106/131 (80%), Positives = 117/131 (89%)

Query: 22  MSAPSLQAFQDQVSELLLRHRSLLDVMSKNGQSSASVNRAVVKAITECGCIQLHATKQVF 81
           MSAPSLQAFQDQVSELLLRHRSLLDV+SKNGQS+ASVNRAV KAITECGCI+LHATKQ F
Sbjct: 1   MSAPSLQAFQDQVSELLLRHRSLLDVLSKNGQSNASVNRAVTKAITECGCIELHATKQTF 60

Query: 82  EPGLGLEQAKELAGTHLQGELCENCREVVASELGRELFYMSALCNLLDINMDEVVEKGSQ 141
           + G  LE A+ELAGTH++G LCENCRE V++ELGR LFYMSAL NLLDI +DEVV K SQ
Sbjct: 61  DIGADLESARELAGTHVEGHLCENCREAVSTELGRNLFYMSALANLLDIQLDEVVVKESQ 120

Query: 142 KCATLGLFNFS 152
           KC+TLGLFN S
Sbjct: 121 KCSTLGLFNLS 131


>B1DK04.1 B1DK04_9BACL Putative uncharacterized protein
          Length = 131

 Score =  176 bits (447), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 84/131 (64%), Positives = 102/131 (77%)

Query: 22  MSAPSLQAFQDQVSELLLRHRSLLDVMSKNGQSSASVNRAVVKAITECGCIQLHATKQVF 81
           MSAP+L+ FQ QVSELLLRHRSLLDVMSK GQS  SVNRAV K +T+CGCI+L+A KQ +
Sbjct: 1   MSAPTLEQFQQQVSELLLRHRSLLDVMSKFGQSGTSVNRAVTKTVTDCGCIELNARKQEY 60

Query: 82  EPGLGLEQAKELAGTHLQGELCENCREVVASELGRELFYMSALCNLLDINMDEVVEKGSQ 141
                LE AK    +H+ G +CE+CR+V+ SELGR LFYM+A+CNLLDI +DEVV K   
Sbjct: 61  ADEPNLESAKSTLQSHISGHVCESCRDVLKSELGRNLFYMTAMCNLLDIKLDEVVAKEYD 120

Query: 142 KCATLGLFNFS 152
           KC+TLGLFN +
Sbjct: 121 KCSTLGLFNLT 131


>C0ZIF1.1 C0ZIF1_BREBN Putative uncharacterized protein
          Length = 131

 Score =  149 bits (376), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 66/131 (50%), Positives = 96/131 (73%)

Query: 22  MSAPSLQAFQDQVSELLLRHRSLLDVMSKNGQSSASVNRAVVKAITECGCIQLHATKQVF 81
           M   ++  FQ QVSELL+RHRS+LDVMSK  ++++ +NR++ KAITECGC+++ A KQ +
Sbjct: 1   MDNRNIDDFQTQVSELLIRHRSVLDVMSKVQETASRINRSLTKAITECGCVEVVAKKQTY 60

Query: 82  EPGLGLEQAKELAGTHLQGELCENCREVVASELGRELFYMSALCNLLDINMDEVVEKGSQ 141
           +    LE  K    TH  G LCE+CR+VV +ELG+ LFY++ALCN+ DI +++V++K S 
Sbjct: 61  DSNKNLEDNKSHLDTHFNGPLCEHCRDVVTAELGKNLFYLTALCNITDIKLEDVLQKESN 120

Query: 142 KCATLGLFNFS 152
           +  TLG+FN S
Sbjct: 121 RLNTLGVFNLS 131


>Q67JP2.1 Q67JP2_SYMTH Putative uncharacterized protein
          Length = 132

 Score =  142 bits (357), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 62/123 (50%), Positives = 95/123 (77%)

Query: 30  FQDQVSELLLRHRSLLDVMSKNGQSSASVNRAVVKAITECGCIQLHATKQVFEPGLGLEQ 89
           FQ+ VSE L+RHRS+LD+M+K  +S+A VNRA+ K++T CGCI++H TKQ +     LEQ
Sbjct: 9   FQETVSECLIRHRSVLDIMAKYQESNARVNRALTKSVTSCGCIEIHGTKQRYPQDATLEQ 68

Query: 90  AKELAGTHLQGELCENCREVVASELGRELFYMSALCNLLDINMDEVVEKGSQKCATLGLF 149
            ++ A  H+ G+LC++CREV+ +E+G  LFY++ALCN+LD+N+ +V+ K  +K + LGL+
Sbjct: 69  LRDHAMEHITGKLCDHCREVIEAEIGNNLFYLAALCNVLDLNLYDVLLKEHKKLSALGLY 128

Query: 150 NFS 152
           NF+
Sbjct: 129 NFA 131


>B2A4A6.1 B2A4A6_NATTJ Putative uncharacterized protein
          Length = 132

 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 62/125 (49%), Positives = 91/125 (72%)

Query: 28  QAFQDQVSELLLRHRSLLDVMSKNGQSSASVNRAVVKAITECGCIQLHATKQVFEPGLGL 87
           Q  Q QVS+LLLRH+S+LD ++K  +S+A VNRAV+K++T CGC+Q+ A KQV      +
Sbjct: 8   QDLQKQVSQLLLRHKSILDNITKFQESNARVNRAVIKSVTNCGCLQVDADKQVIPESATI 67

Query: 88  EQAKELAGTHLQGELCENCREVVASELGRELFYMSALCNLLDINMDEVVEKGSQKCATLG 147
           E   +   THL+G+LC+NC EV+ +E+G  LFYM+AL N L+IN+++V++  S K +TLG
Sbjct: 68  EDFHKHLSTHLKGDLCDNCHEVLTNEIGNHLFYMAALANTLNINLNDVIDNESDKISTLG 127

Query: 148 LFNFS 152
            FN +
Sbjct: 128 FFNLT 132


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.132    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 827,235,573
Number of extensions: 27205133
Number of successful extensions: 66408
Number of sequences better than 1.0e-05: 52
Number of HSP's gapped: 66378
Number of HSP's successfully gapped: 52
Length of query: 152
Length of database: 3,060,696,203
Length adjustment: 114
Effective length of query: 38
Effective length of database: 1,986,700,493
Effective search space: 75494618734
Effective search space used: 75494618734
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 125 (52.8 bits)