BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0188.0068.p
         (119 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q67PZ2.1 Q67PZ2_SYMTH Putative uncharacterized protein                 83   9e-15
B8I8B3.1 B8I8B3_CLOCE Putative uncharacterized protein                 78   3e-13
C0GIF0.1 C0GIF0_9FIRM Putative uncharacterized protein                 58   3e-07
B2A0J5.1 B2A0J5_NATTJ Putative uncharacterized protein                 54   5e-06

>Q67PZ2.1 Q67PZ2_SYMTH Putative uncharacterized protein
          Length = 121

 Score = 82.8 bits (203), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 1/116 (0%)

Query: 5   ISMEKKTVAEAIQYHEEHFTKRVLFQKGDSLVFVLNFMPGQQLPVHKHPGAEVYLLALKG 64
           I+ E+  +A      E  FTKR+ F     LVFVL F PGQ+LP H+HPG+ + +    G
Sbjct: 5   IATEQTNLAAVSLLSEARFTKRICFSNPQVLVFVLTFAPGQELPKHRHPGSTLVVHVTGG 64

Query: 65  KGSIQVNEADYAFVEGDILHIAGDESFAYTNTSDQPASLHVVLSKTPA-PMYAKEI 119
            G +  +  +     GDIL + G+E FA  NT  +   L   LS  P+ P YA+ +
Sbjct: 65  SGVVVADGRETPVAAGDILLVEGEEEFAVRNTGSEALVLLASLSPNPSDPRYAQPV 120


>B8I8B3.1 B8I8B3_CLOCE Putative uncharacterized protein
          Length = 114

 Score = 77.8 bits (190), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 2/114 (1%)

Query: 7   MEKKTVAEAIQYHEEHFTKRVLFQKGDSLVFVLNFMPGQQLPVHKHPGAEVYLLALKGKG 66
           ME K + +++ ++E++ TKR+LF     L FVLN  PGQ LPVHKH  +E+    L G G
Sbjct: 1   MELKNIQDSMVFNEKNLTKRILFANPKVLAFVLNLKPGQTLPVHKHENSELIYYVLTGSG 60

Query: 67  SIQVNEADYAFVEGDILHIAGDESFAYTNTSDQPASLHVVLSKTPA-PMYAKEI 119
            I+VN+  +    G I   +G + F+     +   SL+V +S  P+  MY+K I
Sbjct: 61  QIRVNDEVHEISFGSIGSASGQDDFSIPLVKED-LSLYVTISPNPSNEMYSKGI 113


>C0GIF0.1 C0GIF0_9FIRM Putative uncharacterized protein
          Length = 116

 Score = 58.2 bits (139), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%)

Query: 20  EEHFTKRVLFQKGDSLVFVLNFMPGQQLPVHKHPGAEVYLLALKGKGSIQVNEADYAFVE 79
           E    KR++++  + + F+LN   G  LP H H    V L  L GK S+ V+    A  E
Sbjct: 14  EGKIAKRMIYKDANVICFILNIASGASLPPHTHFDCTVLLQVLTGKASVNVDGNSLAAAE 73

Query: 80  GDILHIAGDESFAYTNTSDQPASLHVVLSKTP 111
            D++ + G E  +  N  ++  +L+V +S  P
Sbjct: 74  QDLIQLDGPEKMSVDNVGEETLALYVSISPAP 105


>B2A0J5.1 B2A0J5_NATTJ Putative uncharacterized protein
          Length = 116

 Score = 53.9 bits (128), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 7   MEKKTVAEAIQYHEEHFTKRVLFQKGDSLVFVLNFMPGQQLPVHKHPGAEVYLLALKGKG 66
           M+K  + + IQ  +    KRV+F+  + + F+LN    Q LP H H G+ V +  ++G  
Sbjct: 1   MKKFELNDYIQEPKGKVAKRVIFKDDNVITFILNIAKRQSLPRHTHFGSTVLIKVIQGSA 60

Query: 67  SIQVNEADYAFVEGDILHIAGDESFAYTNTSDQPASLHVVLSKTPAP 113
           ++  ++      + +++ + G E  +  N  ++   L+V +S  PAP
Sbjct: 61  NLNYDDKSIGISQDNLVQLDGPEEMSVDNLGEKTLVLYVTIS--PAP 105


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.317    0.134    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 707,402,956
Number of extensions: 26731401
Number of successful extensions: 60927
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 60948
Number of HSP's successfully gapped: 4
Length of query: 119
Length of database: 3,060,696,203
Length adjustment: 85
Effective length of query: 34
Effective length of database: 2,259,909,928
Effective search space: 76836937552
Effective search space used: 76836937552
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 126 (53.1 bits)