BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0188.0044.p (214 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B1DJV1.1 B1DJV1_9BACL Adenylate kinase EC=2.7.4.3 335 1e-90 C5D3T8.1 C5D3T8_9BACI Adenylate kinase EC=2.7.4.3 286 6e-76 Q5UIN7.1 Q5UIN7_BACST Adenylate kinase EC=2.7.4.3 285 2e-75 A7Z0Q9.1 KAD_BACA2 Adenylate kinase EC=2.7.4.3 284 3e-75 B7GJ88.1 B7GJ88_ANOFW Adenylate kinase EC=2.7.4.3 280 9e-74 >B1DJV1.1 B1DJV1_9BACL Adenylate kinase EC=2.7.4.3 Length = 216 Score = 335 bits (860), Expect = 1e-90, Method: Compositional matrix adjust. Identities = 158/214 (73%), Positives = 184/214 (85%) Query: 1 VNILFMGPPGAGKGTQAAVVVKELGIPHISTGDAFRLAIKQGTPVGLKAKSYIDQGLLVP 60 +NILFMGPPGAGKGTQA +V E GIPHISTGDAFRLA+KQGTP+GLKAK Y+DQG LV Sbjct: 1 MNILFMGPPGAGKGTQAERIVGEFGIPHISTGDAFRLAMKQGTPLGLKAKEYVDQGKLVS 60 Query: 61 DDVTIGIVEERLQQSDCEKGFLLDGFPRTLSQAEALEDILSRLNRSLDHVINLNVDRGLL 120 D++T GIV+ERL Q DC KGFLLDGFPRTL QAEAL+ +L+ LNRS+DHV+NL VDRGLL Sbjct: 61 DEITNGIVKERLAQDDCNKGFLLDGFPRTLQQAEALDVMLTELNRSIDHVVNLKVDRGLL 120 Query: 121 MARLTGRRICTVCGTSYHLIFNPPKQEGICDIDGGALYQRPDDNEESVGKRLDEYDNKTA 180 +ARLTGRRIC CG++YH++FNPPKQEG+CD GG LYQR DD EE VG RLDEY +KTA Sbjct: 121 LARLTGRRICKACGSTYHVMFNPPKQEGVCDKCGGELYQRSDDTEEKVGTRLDEYISKTA 180 Query: 181 PLLTFYDNKGLLRQVNGENEINVVTSEIVSLLRG 214 PLL +Y+ KGLLR+V+GE EI+ VT+EIVS LRG Sbjct: 181 PLLDYYNGKGLLREVDGEKEIDTVTAEIVSCLRG 214 >C5D3T8.1 C5D3T8_9BACI Adenylate kinase EC=2.7.4.3 Length = 216 Score = 286 bits (733), Expect = 6e-76, Method: Compositional matrix adjust. Identities = 134/214 (62%), Positives = 170/214 (79%) Query: 1 VNILFMGPPGAGKGTQAAVVVKELGIPHISTGDAFRLAIKQGTPVGLKAKSYIDQGLLVP 60 +N++ MG PGAGKGTQA +V+ GIPHISTGD FR AIK+GTP+GL+AK Y+D+G LVP Sbjct: 1 MNLVLMGLPGAGKGTQAEKIVETYGIPHISTGDMFRAAIKEGTPLGLQAKEYMDRGDLVP 60 Query: 61 DDVTIGIVEERLQQSDCEKGFLLDGFPRTLSQAEALEDILSRLNRSLDHVINLNVDRGLL 120 D+VTIGIV ERL + DC+KGFLLDGFPRT++QAEALE+IL+ LNRS+D+VI++ VD+ +L Sbjct: 61 DEVTIGIVRERLSKDDCQKGFLLDGFPRTVAQAEALENILAELNRSIDYVIHIQVDKDIL 120 Query: 121 MARLTGRRICTVCGTSYHLIFNPPKQEGICDIDGGALYQRPDDNEESVGKRLDEYDNKTA 180 M RLTGRRIC CG +YHL+FNPP + G+CD GG LYQR DDNEE+V RL+ +T Sbjct: 121 MERLTGRRICKNCGATYHLVFNPPAKSGVCDKCGGELYQRADDNEETVANRLEVNIKQTQ 180 Query: 181 PLLTFYDNKGLLRQVNGENEINVVTSEIVSLLRG 214 PLL FY+ KG LR +NG+ +I V ++I LL G Sbjct: 181 PLLEFYEKKGYLRHINGQQDIEKVFADIRELLGG 214 >Q5UIN7.1 Q5UIN7_BACST Adenylate kinase EC=2.7.4.3 Length = 213 Score = 285 bits (729), Expect = 2e-75, Method: Compositional matrix adjust. Identities = 133/212 (62%), Positives = 170/212 (80%) Query: 1 VNILFMGPPGAGKGTQAAVVVKELGIPHISTGDAFRLAIKQGTPVGLKAKSYIDQGLLVP 60 +N++ MG PGAGKGTQA +V+ GIPHISTGD FR AIK+GTP+GL+AK Y+D+G LVP Sbjct: 1 MNLVLMGLPGAGKGTQAEKIVETYGIPHISTGDMFRAAIKEGTPLGLQAKEYMDRGDLVP 60 Query: 61 DDVTIGIVEERLQQSDCEKGFLLDGFPRTLSQAEALEDILSRLNRSLDHVINLNVDRGLL 120 D+VTIGIV ERL + DC+KGFLLDGFPRT++QAEALE+IL+ LNRS+D+VI+++VD+ +L Sbjct: 61 DEVTIGIVRERLSKDDCQKGFLLDGFPRTVAQAEALENILAELNRSIDYVIHIHVDKDIL 120 Query: 121 MARLTGRRICTVCGTSYHLIFNPPKQEGICDIDGGALYQRPDDNEESVGKRLDEYDNKTA 180 M RLTGRRIC CG +YHL+FNPP + G+CD GG LYQR DDNEE+V RL+ +T Sbjct: 121 MERLTGRRICKNCGATYHLVFNPPAKPGVCDKCGGELYQRADDNEETVANRLEVNVKQTQ 180 Query: 181 PLLTFYDNKGLLRQVNGENEINVVTSEIVSLL 212 PLL FY+ KG LR +NG+ +I V ++I LL Sbjct: 181 PLLDFYEKKGYLRHINGQQDIEKVFADIRELL 212 >A7Z0Q9.1 KAD_BACA2 Adenylate kinase EC=2.7.4.3 Length = 217 Score = 284 bits (727), Expect = 3e-75, Method: Compositional matrix adjust. Identities = 135/214 (63%), Positives = 169/214 (78%) Query: 1 VNILFMGPPGAGKGTQAAVVVKELGIPHISTGDAFRLAIKQGTPVGLKAKSYIDQGLLVP 60 +N++ MG PGAGKGTQ +V++ GIPHISTGD FR A+K+ TP+GL+AKSYID+G LVP Sbjct: 1 MNLVLMGLPGAGKGTQGERIVEDYGIPHISTGDMFRAAMKEETPLGLEAKSYIDKGELVP 60 Query: 61 DDVTIGIVEERLQQSDCEKGFLLDGFPRTLSQAEALEDILSRLNRSLDHVINLNVDRGLL 120 D+VTIGIV+ERL + DCE+GFLLDGFPRT++QAEALE+IL + +D+VIN+ VD+ L Sbjct: 61 DEVTIGIVKERLGKDDCERGFLLDGFPRTVAQAEALENILEEYGKPIDYVINIKVDKDSL 120 Query: 121 MARLTGRRICTVCGTSYHLIFNPPKQEGICDIDGGALYQRPDDNEESVGKRLDEYDNKTA 180 M RLTGRRIC+VCGT+YHL+FNPPK G+CD DGG LYQR DDNEE+V KRL+ +T Sbjct: 121 MERLTGRRICSVCGTTYHLVFNPPKTPGVCDKDGGDLYQRADDNEETVSKRLEVNMKQTQ 180 Query: 181 PLLTFYDNKGLLRQVNGENEINVVTSEIVSLLRG 214 PLL FY KG L VNG+ +IN V ++ LL G Sbjct: 181 PLLDFYSEKGYLVNVNGQQDINDVYKDVKELLGG 214 >B7GJ88.1 B7GJ88_ANOFW Adenylate kinase EC=2.7.4.3 Length = 217 Score = 280 bits (715), Expect = 9e-74, Method: Compositional matrix adjust. Identities = 131/214 (61%), Positives = 167/214 (78%) Query: 1 VNILFMGPPGAGKGTQAAVVVKELGIPHISTGDAFRLAIKQGTPVGLKAKSYIDQGLLVP 60 +N++ MG PGAGKGTQA +V++ IPHISTGD FR AIK+GT +GL+AKSY+D+G LVP Sbjct: 2 MNLVLMGLPGAGKGTQAEKIVEKYKIPHISTGDMFRAAIKEGTELGLQAKSYMDRGDLVP 61 Query: 61 DDVTIGIVEERLQQSDCEKGFLLDGFPRTLSQAEALEDILSRLNRSLDHVINLNVDRGLL 120 D+VTIGIV ERL + DC+ GFLLDGFPRT++QAEALE +L +L+RS+D+VIN+ VD+ +L Sbjct: 62 DEVTIGIVRERLSKDDCQNGFLLDGFPRTVAQAEALETLLQQLDRSIDYVINIEVDKSIL 121 Query: 121 MARLTGRRICTVCGTSYHLIFNPPKQEGICDIDGGALYQRPDDNEESVGKRLDEYDNKTA 180 M RLTGRRIC CG +YHL+FNPP Q G+CD GG LYQR DDNE +V RL+ +T Sbjct: 122 MERLTGRRICKECGATYHLVFNPPAQAGVCDKCGGELYQRADDNEATVANRLEVNMKQTQ 181 Query: 181 PLLTFYDNKGLLRQVNGENEINVVTSEIVSLLRG 214 PLL FY+ KG LR +NG+ I+ V ++I LL G Sbjct: 182 PLLDFYEAKGYLRNINGQQHIDQVFADICELLGG 215 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.140 0.406 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,350,124,127 Number of extensions: 58249560 Number of successful extensions: 197562 Number of sequences better than 1.0e-05: 2805 Number of HSP's gapped: 194672 Number of HSP's successfully gapped: 2849 Length of query: 214 Length of database: 3,060,696,203 Length adjustment: 130 Effective length of query: 84 Effective length of database: 1,835,964,253 Effective search space: 154220997252 Effective search space used: 154220997252 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 128 (53.9 bits)