BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0025.p (230 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B7DMN0.1 B7DMN0_9BACL Putative uncharacterized protein 84 1e-14 C1PQ82.1 C1PQ82_ALIAC Putative uncharacterized protein 83 1e-14 Q2BAK5.1 Q2BAK5_9BACI Putative uncharacterized protein 79 4e-13 A6CP70.1 A6CP70_9BACI Putative uncharacterized protein 77 1e-12 C1XT51.1 C1XT51_9DEIN Putative uncharacterized protein 74 1e-11 >B7DMN0.1 B7DMN0_9BACL Putative uncharacterized protein Length = 358 Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 24/162 (14%) Query: 58 RKLLKGIQVQPQPRILELGAGTGFLTRLLLTMY-GGSGVLVDN---CRT----------S 103 R L +G+ V+ +PRIL LGA G+ L MY GG V+VD CR Sbjct: 166 RALFRGLDVK-RPRILFLGAAEGYEAMQLYAMYPGGEAVMVDYDAFCRDHRFGDFPEDYP 224 Query: 104 FDAY------SRIKEKNEDRITYRLEDIFALKVPEPFDIVCSFGLIEHFQE--KQEILSI 155 F Y +R ++E ++TY +EDI L FDIV S GL+EHF + K E + Sbjct: 225 FLGYDPATGSARPWYRSEMKLTYLVEDIRKLPFGREFDIVLSVGLLEHFPDEYKPECIEW 284 Query: 156 HKEHCRPDGHMILIVPMDSFLTRAYYEVHPE-INLGYRELLT 196 H++ RP G+ IL P + T+ +Y V E +N YREL+T Sbjct: 285 HRKFLRPGGYAILTTPRLGWRTKLFYHVMAEAMNYTYRELMT 326 >C1PQ82.1 C1PQ82_ALIAC Putative uncharacterized protein Length = 380 Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 61/162 (37%), Positives = 84/162 (51%), Gaps = 24/162 (14%) Query: 58 RKLLKGIQVQPQPRILELGAGTGFLTRLLLTMY-GGSGVLVDN---CRT----------S 103 R L +G+ V+ +PRIL LGA G+ L MY GG V+VD CR Sbjct: 188 RALFRGLDVK-RPRILFLGAAEGYEAMQLYAMYPGGEAVMVDYDAFCRDHRFGDFPEDYP 246 Query: 104 FDAY------SRIKEKNEDRITYRLEDIFALKVPEPFDIVCSFGLIEHFQE--KQEILSI 155 F Y +R ++E ++TY +EDI L FDIV S GL+EHF + K E + Sbjct: 247 FLGYDPATGSARPWYRSEMKLTYLVEDIRKLPFGREFDIVLSVGLLEHFPDEYKPECIEW 306 Query: 156 HKEHCRPDGHMILIVPMDSFLTRAYYEVHPE-INLGYRELLT 196 H++ RP G+ IL P + T+ +Y V E +N YREL+T Sbjct: 307 HRKFLRPGGYAILTTPRLGWRTKLFYHVMAEAMNYTYRELMT 348 >Q2BAK5.1 Q2BAK5_9BACI Putative uncharacterized protein Length = 343 Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 55/151 (36%), Positives = 79/151 (52%), Gaps = 23/151 (15%) Query: 69 QPRILELGAGTGFLTRLLLTMY-GGSGVLVDN---CR--------TSFDAYSRIKE---- 112 +PRIL LGA G+ L MY GG VLVD CR S+ + K+ Sbjct: 161 KPRILFLGAAEGYEAMQLSAMYPGGEAVLVDYDPFCRDARFEEFPESYPFLGQNKQTGGR 220 Query: 113 ----KNEDRITYRLEDIFALKVPEPFDIVCSFGLIEHFQE--KQEILSIHKEHCRPDGHM 166 KN+ +I Y +EDI L + FDIV S GL+EHF + K E++ H+ +P G++ Sbjct: 221 KAFYKNDFQIDYVVEDIRNLPYGKEFDIVLSVGLLEHFPDKLKPEVVDWHRSFVKPSGYI 280 Query: 167 ILIVPMDSFLTRAYYEVHPEI-NLGYRELLT 196 I+ P ++ YYE+ ++ N YREL+T Sbjct: 281 IMTTPRAQLRSKLYYEIMADVMNHTYRELMT 311 >A6CP70.1 A6CP70_9BACI Putative uncharacterized protein Length = 350 Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 24/162 (14%) Query: 58 RKLLKGIQVQPQPRILELGAGTGFLTRLLLTMYGGSGVLV----DNCRTSF-----DAYS 108 R L +G+ V +P+IL LGA G+ L MY G+ V++ + C+T+ D+Y Sbjct: 158 RALFEGLNVS-KPKILFLGAAEGYEAMQLAAMYPGAKVVMVDYDEYCKTTRFEHFPDSYP 216 Query: 109 RIKE-----------KNEDRITYRLEDIFALKVPEPFDIVCSFGLIEHFQE--KQEILSI 155 + E K++ I Y ++DI L + FDIV S GL+EHF + K E++ Sbjct: 217 FLGENPLTGQRKVYYKDDLNIEYVVDDIRNLAYGKEFDIVISVGLLEHFPDEYKPEVIDW 276 Query: 156 HKEHCRPDGHMILIVPMDSFLTRAYYEVHPEI-NLGYRELLT 196 H++ + +G++I+ P + +R YY + ++ N YREL+T Sbjct: 277 HRKFLKANGYVIMTTPRNQLRSRIYYNIFADVMNHTYRELMT 318 >C1XT51.1 C1XT51_9DEIN Putative uncharacterized protein Length = 337 Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust. Identities = 56/179 (31%), Positives = 89/179 (49%), Gaps = 24/179 (13%) Query: 58 RKLLKGIQVQPQPRILELGAGTGFLTRLLLTMY-GGSGVLVDN---CRTS---------- 103 R L +G++V+ +P IL LGA G+ L MY GG VLVD CR Sbjct: 145 RALFEGLEVR-RPSILFLGAAEGYEAMQLSAMYPGGEIVLVDYDAFCRDERFGKFPEAYP 203 Query: 104 FDAYS------RIKEKNEDRITYRLEDIFALKVPEPFDIVCSFGLIEHFQE--KQEILSI 155 F Y+ + + + R+ + +EDI L FDIV S GL+EHF + K ++ Sbjct: 204 FLGYNPATGSWKTYHREDFRVDFVVEDIRNLNYGPEFDIVLSVGLLEHFPDSLKPMVVEW 263 Query: 156 HKEHCRPDGHMILIVPMDSFLTRAYYEVHPEI-NLGYRELLTKKTALEQIQTSGLQPVR 213 H++ +P G++IL P ++ +Y + + N GYREL+ + + +GL+ +R Sbjct: 264 HRKFVKPGGYVILTTPRRQLKSKLFYRIMGRLMNYGYRELMDARQLGKYAHENGLEILR 322 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.323 0.141 0.418 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,413,994,574 Number of extensions: 59907222 Number of successful extensions: 140270 Number of sequences better than 1.0e-05: 6 Number of HSP's gapped: 140467 Number of HSP's successfully gapped: 6 Length of query: 230 Length of database: 3,060,696,203 Length adjustment: 131 Effective length of query: 99 Effective length of database: 1,826,543,238 Effective search space: 180827780562 Effective search space used: 180827780562 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.5 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 129 (54.3 bits)