BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0021.p (1036 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C2SIR1.1 C2SIR1_BACCE Cyclic peptide transporter 1060 0.0 A9VQN2.1 A9VQN2_BACWK Cyclic peptide transporter 1059 0.0 B8I5I6.1 B8I5I6_CLOCE Cyclic peptide transporter 994 0.0 C2XEI0.1 C2XEI0_BACCE Cyclic peptide transporter 944 0.0 B5UXL3.1 B5UXL3_BACCE Cyclic peptide transporter 944 0.0 >C2SIR1.1 C2SIR1_BACCE Cyclic peptide transporter Length = 1055 Score = 1060 bits (2740), Expect = 0.0, Method: Compositional matrix adjust. Identities = 511/993 (51%), Positives = 694/993 (69%), Gaps = 4/993 (0%) Query: 32 LSNEETASIEAWINKNMREGKIPGASVVIVKGEQTVYSKGFGDSDVAAKRPVTPETLFEL 91 + + +++ I K M+E KIPG SV++VKG+Q VY K FG S++ K+ VT +TLFE+ Sbjct: 34 FTENDKEQLDSLIKKQMQEAKIPGMSVIVVKGDQAVYKKSFGYSNLETKQRVTEKTLFEI 93 Query: 92 GSTSKAFTALAVLSLEKQGLLHMKDPVQKYLSWFQVSYAGE-DGSGTSRVAGITLEQLLH 150 GS SKAFTALA+ L ++GL+ +KDPV KYL WFQ+ Y G G ++ ITLEQLL+ Sbjct: 94 GSNSKAFTALAIYQLVQKGLIDLKDPVSKYLQWFQMIYEGNYKGQQLNKNVEITLEQLLY 153 Query: 151 HTSGLSFDTISDIPVGGDEQALERTVKAVVGAKLDFYPGERFQYASINYDILGLVIEKVT 210 HTSG+ F TI DIP+ D ALE TV+ ++ KL+ YPGE+F YASINYDILGLVI+KVT Sbjct: 154 HTSGIPFHTIGDIPISNDNDALENTVREILNQKLETYPGEQFNYASINYDILGLVIQKVT 213 Query: 211 GESFEVYLKNNVLNPLGLKNTYLFRTEAEQHEMARGYKLGFLKAREYQAPVYRGNTPAGY 270 +SFE Y++NN+LN + NT+LFR + +++M++GYK+GFLK E+ AP+YRGNTPAGY Sbjct: 214 NQSFEQYVQNNILNQFNMGNTFLFRKDVAKYDMSKGYKIGFLKPIEFNAPIYRGNTPAGY 273 Query: 271 VISNGNDMAAWLKIQMGGQAEAAVAADWIGRSHQPDRSVFPGLDGSSYAAGWFVYQKGSG 330 ISN DM WL++Q+G + I +H P+RSV P DGSSYA GW V+Q G G Sbjct: 274 FISNNEDMEKWLRMQLGIYGLSDDHQKAIYSTHIPNRSVPPSEDGSSYAGGWQVFQNGPG 333 Query: 331 ELSHGGSNPNYSSSVVFRPEEKIGVAVLANINSSYTQAMGQGIMEILHNQKLPENVSDQY 390 E+SH GSNPN+SS VVF P+EK+GVAV+AN+NS YTQ +GQ IM+ L + + N D Y Sbjct: 334 EISHAGSNPNFSSFVVFHPQEKLGVAVMANMNSEYTQNIGQAIMDTLVGESVVTNGKDTY 393 Query: 391 RSVDKISTVILCIAVPLILLTGWFFIMTIKEIITKERRLRRKTAKNIYXXXXXXXXXXXX 450 +S+D S +L VP ++T +F + + ++ K+R+L + K+I Sbjct: 394 KSIDAFSVTVLLFMVPFSIITLYFIFIVMIQVYKKKRKLEKNKFKSICIPFITFLFAFLA 453 Query: 451 SYCFYNIPSVLFSGLSWELVEVWAPSSFMIAIPGLLIGVFFFSVYYFTTSLFPKARDRTL 510 Y Y IP V F LSW+ V VW P S A+ LI + F +Y ++FP + Sbjct: 454 GYALYKIPFVFFGRLSWDFVNVWLPISMSFAVWATLISIVLFCLYLSLITVFPLHNKKNF 513 Query: 511 FPIILLSTXXXXXXXXXXXXXXEALNHTN-RFQVGLFSFFVMGIAVYVFGQRLVRTKLIT 569 FPI +LS EAL +N LF +F++GI YV Q+LVRT+LIT Sbjct: 514 FPIFVLSVTSGFGNAMIIFIINEALTRSNYSSNNSLFLYFLLGIITYVLAQKLVRTQLIT 573 Query: 570 LTNEMVFQKRTDLIDKILRSSYQNIETIENERIYSVLNNDTETISGVTNILIFGVTSLVT 629 +TN ++++KRT LI+ IL++ Y+ IE IE+ERI + LNNDTE IS +I G+T +T Sbjct: 574 ITNNLIYEKRTQLINDILKNPYEKIEKIESERIQTTLNNDTEAISNYAATIITGLTDSIT 633 Query: 630 LLCCFVYLGTINLLGLLISIAVILFAAGLYFLAGRHANQVWGETRDIQNTFFKFINHMVS 689 LLCC VYLG IN+ GLL+SIAVIL AAG+Y++AG+ AN +W +TR+IQNTFF++IN ++ Sbjct: 634 LLCCLVYLGVINVYGLLVSIAVILVAAGMYYVAGKSANNLWEQTRNIQNTFFRYINDLIG 693 Query: 690 GFKELSLHKGKKEEFQQELKQSCDTYRIKRIQGDLSFANVFVMGELLFTLVIGVVAFIFP 749 G+KELS+ K K+EEF Q +++SC+ Y+ KRIQG L FANVF++GELLF +VIG V F+FP Sbjct: 694 GYKELSIGKSKREEFGQGMQESCEDYKDKRIQGGLKFANVFIIGELLFVMVIGAVTFLFP 753 Query: 750 LLFKDISNSSLRAYIFVFLYMTGPVHGVLDAIPNFIRVRISWNRLNELSRQLDIAEERQE 809 LLFK + + LR+Y+FVFLYMTGP+H +L+ IPN I+++ISW R+N+ SR L E + Sbjct: 754 LLFKGVQSEFLRSYVFVFLYMTGPLHSILNTIPNAIQMKISWKRINDFSRYL--KTETNK 811 Query: 810 GPPDNEWSEAAPVHLVAKDITYHYQSQEGEQFAVGPLNLSVRSGQVTFVTGGNGSGKSTL 869 ++ + +++ K++ Y Y+S+ GE F VGP+N ++SG+V F+TGGNGSGKSTL Sbjct: 812 TDVNSTLIPQSKINMEIKELVYQYESEHGEPFQVGPINFELKSGEVVFITGGNGSGKSTL 871 Query: 870 GKLITGLYKPDQGEILLNGRQAAPEELSQSFSAIFSDFHLFERLYGMETGDKSQEIQEYL 929 KLITGLY + G I +N ++ E+L + +SAIFSDF+LF ++YG++ K +EI++YL Sbjct: 872 AKLITGLYSANSGNIFVNNQEINQEQLRELYSAIFSDFYLFTKVYGIDYSSKEEEIKKYL 931 Query: 930 QKLDIEHKVQIQQGAFSTVNLSTGQRKRLALLISCLEDRPIYLFDEWAADQDPEFRDYFY 989 + L I+ KVQIQ G FST LSTGQRKRLALLIS LED+ IYLFDEWAADQDPEFR +FY Sbjct: 932 KILRIDEKVQIQNGEFSTTKLSTGQRKRLALLISYLEDKSIYLFDEWAADQDPEFRHFFY 991 Query: 990 HVLIPELKQKGKCIIAITHDDRYFHMADQLLKM 1022 L+ ELK+KGK IIAITHDDRYFH+AD+++KM Sbjct: 992 TELLAELKEKGKAIIAITHDDRYFHIADKVIKM 1024 >A9VQN2.1 A9VQN2_BACWK Cyclic peptide transporter Length = 1055 Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 511/993 (51%), Positives = 694/993 (69%), Gaps = 4/993 (0%) Query: 32 LSNEETASIEAWINKNMREGKIPGASVVIVKGEQTVYSKGFGDSDVAAKRPVTPETLFEL 91 + + +++ I K M+E KIPG SV++VKG+Q VY K FG S++ K+ VT +TLFE+ Sbjct: 34 FTENDKEQLDSLIKKQMQEAKIPGMSVIVVKGDQAVYKKSFGYSNLETKQRVTEKTLFEI 93 Query: 92 GSTSKAFTALAVLSLEKQGLLHMKDPVQKYLSWFQVSYAGE-DGSGTSRVAGITLEQLLH 150 GS SKAFTALA+ L ++GL+ +KDPV KYL WFQ+ Y G G ++ ITLEQLL+ Sbjct: 94 GSNSKAFTALAIYQLVQKGLIDLKDPVSKYLQWFQMIYEGNYKGQQLNKNVEITLEQLLY 153 Query: 151 HTSGLSFDTISDIPVGGDEQALERTVKAVVGAKLDFYPGERFQYASINYDILGLVIEKVT 210 HTSG+ F TI DIP+ D ALE TV+ ++ KL+ YPGE+F YASINYDILGLVI+KVT Sbjct: 154 HTSGIPFHTIGDIPISNDNDALENTVREILNQKLETYPGEQFNYASINYDILGLVIQKVT 213 Query: 211 GESFEVYLKNNVLNPLGLKNTYLFRTEAEQHEMARGYKLGFLKAREYQAPVYRGNTPAGY 270 +SFE Y++NN+LN + NT+LFR + +++M++GYK+GFLK E+ AP+YRGNTPAGY Sbjct: 214 NQSFEQYVQNNILNQFNMGNTFLFRKDVAKYDMSKGYKIGFLKPIEFNAPIYRGNTPAGY 273 Query: 271 VISNGNDMAAWLKIQMGGQAEAAVAADWIGRSHQPDRSVFPGLDGSSYAAGWFVYQKGSG 330 ISN DM WL++Q+G + I +H P+RSV P DGSSYA GW V+Q G G Sbjct: 274 FISNNEDMEKWLRMQLGIYGLSDDHQKAIYSTHIPNRSVPPSEDGSSYAGGWQVFQNGPG 333 Query: 331 ELSHGGSNPNYSSSVVFRPEEKIGVAVLANINSSYTQAMGQGIMEILHNQKLPENVSDQY 390 E+SH GSNPN+SS VVF P+EK+GVAV+AN+NS YTQ +GQ IM+ L + + N D Y Sbjct: 334 EISHAGSNPNFSSFVVFHPQEKLGVAVMANMNSDYTQNIGQAIMDTLVGESVVTNGKDTY 393 Query: 391 RSVDKISTVILCIAVPLILLTGWFFIMTIKEIITKERRLRRKTAKNIYXXXXXXXXXXXX 450 +S+D S +L VP ++T +F + + ++ K+R+L + K+I Sbjct: 394 KSIDAFSVTVLLFMVPFSIITLYFIFIVMIQVYKKKRKLEKNKFKSICIPFITFLFAFLA 453 Query: 451 SYCFYNIPSVLFSGLSWELVEVWAPSSFMIAIPGLLIGVFFFSVYYFTTSLFPKARDRTL 510 Y Y IP V F LSW+ V VW P S A+ LI + F +Y ++FP + Sbjct: 454 GYALYKIPFVFFGRLSWDFVNVWLPISMSFAVWATLISIVLFCLYLSLITVFPLHNKKNF 513 Query: 511 FPIILLSTXXXXXXXXXXXXXXEALNHTN-RFQVGLFSFFVMGIAVYVFGQRLVRTKLIT 569 FPI +LS EAL +N LF +F++GI YV Q+LVRT+LIT Sbjct: 514 FPIFVLSVTSGFGNAMIIFIINEALTRSNYSSNNSLFLYFLLGIITYVLAQKLVRTQLIT 573 Query: 570 LTNEMVFQKRTDLIDKILRSSYQNIETIENERIYSVLNNDTETISGVTNILIFGVTSLVT 629 +TN ++++KRT LI+ IL++ Y+ IE IE+ERI + LNNDTE IS +I G+T +T Sbjct: 574 ITNNLIYEKRTQLINDILKNPYEKIEKIESERIQTTLNNDTEAISNYAATIITGLTDSIT 633 Query: 630 LLCCFVYLGTINLLGLLISIAVILFAAGLYFLAGRHANQVWGETRDIQNTFFKFINHMVS 689 LLCC VYLG IN+ GLL+SIAVIL AAG+Y++AG+ AN +W +TR+IQNTFF++IN ++ Sbjct: 634 LLCCLVYLGVINVYGLLVSIAVILVAAGMYYVAGKSANNLWEQTRNIQNTFFRYINDLIG 693 Query: 690 GFKELSLHKGKKEEFQQELKQSCDTYRIKRIQGDLSFANVFVMGELLFTLVIGVVAFIFP 749 G+KELS+ K K+EEF Q +++SC+ Y+ KRIQG L FANVF++GELLF +VIG V F+FP Sbjct: 694 GYKELSIGKSKREEFGQGMQESCEDYKDKRIQGGLKFANVFIIGELLFVMVIGAVTFLFP 753 Query: 750 LLFKDISNSSLRAYIFVFLYMTGPVHGVLDAIPNFIRVRISWNRLNELSRQLDIAEERQE 809 LLFK + + LR+Y+FVFLYMTGP+H +L+ IPN I+++ISW R+N+ SR L E + Sbjct: 754 LLFKGVQSEFLRSYVFVFLYMTGPLHSILNTIPNAIQMKISWKRINDFSRYL--KTETNK 811 Query: 810 GPPDNEWSEAAPVHLVAKDITYHYQSQEGEQFAVGPLNLSVRSGQVTFVTGGNGSGKSTL 869 ++ + +++ K++ Y Y+S+ GE F VGP+N ++SG+V F+TGGNGSGKSTL Sbjct: 812 TDVNSTLIPQSKINMEIKELVYQYESEHGEPFQVGPINFELKSGEVVFITGGNGSGKSTL 871 Query: 870 GKLITGLYKPDQGEILLNGRQAAPEELSQSFSAIFSDFHLFERLYGMETGDKSQEIQEYL 929 KLITGLY + G I +N ++ E+L + +SAIFSDF+LF ++YG++ K +EI++YL Sbjct: 872 AKLITGLYSANSGNIFVNNQEINQEQLRELYSAIFSDFYLFTKVYGIDYSSKEEEIKKYL 931 Query: 930 QKLDIEHKVQIQQGAFSTVNLSTGQRKRLALLISCLEDRPIYLFDEWAADQDPEFRDYFY 989 + L I+ KVQIQ G FST LSTGQRKRLALLIS LED+ IYLFDEWAADQDPEFR +FY Sbjct: 932 KILRIDEKVQIQNGEFSTTKLSTGQRKRLALLISYLEDKSIYLFDEWAADQDPEFRHFFY 991 Query: 990 HVLIPELKQKGKCIIAITHDDRYFHMADQLLKM 1022 L+ ELK+KGK IIAITHDDRYFH+AD+++KM Sbjct: 992 TELLAELKEKGKAIIAITHDDRYFHIADKVIKM 1024 >B8I5I6.1 B8I5I6_CLOCE Cyclic peptide transporter Length = 1032 Score = 994 bits (2571), Expect = 0.0, Method: Compositional matrix adjust. Identities = 503/986 (51%), Positives = 680/986 (68%), Gaps = 11/986 (1%) Query: 40 IEAWINKNMREGKIPGASVVIVKGEQTVYSKGFGDSDVAAKRPVTPETLFELGSTSKAFT 99 IE I+K M+ GKIPG SVV+VK ++ +Y FG SD+ K VT TLFELGS SKAFT Sbjct: 46 IEDHIHKYMKSGKIPGLSVVVVKDDRDIYKSSFGYSDLKRKEKVTENTLFELGSNSKAFT 105 Query: 100 ALAVLSLEKQGLLHMKDPVQKYLSWFQVSYAGEDGSGTSRVAGITLEQLLHHTSGLSFDT 159 + +L L+++GL+ ++D + KY+ W ++ Y GE IT+EQ LHHTSG+ F++ Sbjct: 106 GIGILQLQEKGLIKLEDSINKYIPWLKLKYKGE-------AVDITVEQFLHHTSGIPFES 158 Query: 160 ISDIPVGGDEQALERTVKAVVGAKLDFYPGERFQYASINYDILGLVIEKVTGESFEVYLK 219 I I E ALE TVK +VG++L +YPG + YA+INYD+LGL+I+ VTGES+E Y+ Sbjct: 159 IGYIKPDQRENALENTVKTLVGSELQYYPGTEYSYATINYDVLGLLIKIVTGESYEKYMH 218 Query: 220 NNVLNPLGLKNTYLFRTEAEQHE-MARGYKLGFLKAREYQAPVYRGNTPAGYVISNGNDM 278 +N++ GL NT+LFR +A + +A+GYK+GFL+ EY AP+YRGNTPAGY+ISN ND+ Sbjct: 219 DNIVKTYGLNNTFLFREQASKKGVIAKGYKVGFLRPLEYNAPIYRGNTPAGYLISNINDI 278 Query: 279 AAWLKIQMGGQAEAAVAADWIGRSHQPDRSVFPGLDGSSYAAGWFVYQKGSGELSHGGSN 338 A WLKIQMG + + I SH P+RSV P +DGSSYAAGW V+Q G GELSHGGSN Sbjct: 279 AGWLKIQMG-TSNSVNDKKLIQESHIPNRSVRPYVDGSSYAAGWSVFQSGGGELSHGGSN 337 Query: 339 PNYSSSVVFRPEEKIGVAVLANINSSYTQAMGQGIMEILHNQKLPENVSDQYRSVDKIST 398 PNYSS +VFRPEEK+GVAVLAN+NSSY Q +GQGI++I+ +++ D Y +D +S Sbjct: 338 PNYSSFIVFRPEEKLGVAVLANLNSSYVQTLGQGIIDIILDRETAAPQDDIYLIIDNVSV 397 Query: 399 VILCIAVPLILLTGWFFIMTIKEIITKERRLRRKTAKNIYXXXXXXXXXXXXSYCFYNIP 458 I CIAV +I++ + I +I+ R+ K YC Y+IP Sbjct: 398 TISCIAVSIIIILLVLILHFIFQILKGNRKFEGSKIKCFVSTILSAVFILGFGYCLYSIP 457 Query: 459 SVLFSGLSWELVEVWAPSSFMIAIPGLLIGVFFFSVYYFTTSLFPKAR--DRTLFPIILL 516 VL+ GL W+ V+VWAP + M A+ L I V+ LF K + +R LF + +L Sbjct: 458 EVLYWGLPWDFVKVWAPFTLMAAVISLFILAIMVIVFLNLNFLFKKNKKNNRPLFIMAIL 517 Query: 517 STXXXXXXXXXXXXXXEALNHTNRFQVGLFSFFVMGIAVYVFGQRLVRTKLITLTNEMVF 576 S +A+N FQ GLF +F+ GI +YV GQRL+R L+ +TNE V+ Sbjct: 518 SVFSGFGNALIIFIINQAVNGGREFQKGLFLYFMAGIVIYVAGQRLLRNMLVNITNEDVY 577 Query: 577 QKRTDLIDKILRSSYQNIETIENERIYSVLNNDTETISGVTNILIFGVTSLVTLLCCFVY 636 KR +ID+IL + YQ+IE IEN RIY+ LNNDTE IS N++I G+TSLVTL+CC VY Sbjct: 578 SKRIMMIDRILNTPYQSIERIENGRIYAGLNNDTEVISNFANVVITGITSLVTLICCLVY 637 Query: 637 LGTINLLGLLISIAVILFAAGLYFLAGRHANQVWGETRDIQNTFFKFINHMVSGFKELSL 696 LG IN++GL+ISI VIL AAGLYF+ GR AN+ W +TRDIQNTFF FIN + GFKEL L Sbjct: 638 LGIINIMGLIISIIVILVAAGLYFVMGRSANKFWEQTRDIQNTFFGFINDLTGGFKELYL 697 Query: 697 HKGKKEEFQQELKQSCDTYRIKRIQGDLSFANVFVMGELLFTLVIGVVAFIFPLLFKDIS 756 +K K+++F +++K C Y+ KRI+GD+ F NVF++GEL+FTLVIGVV F FP+ +I Sbjct: 698 NKFKRKQFSEDMKDKCYIYKEKRIRGDMKFNNVFIIGELMFTLVIGVVVFFFPVFLSNIQ 757 Query: 757 NSSLRAYIFVFLYMTGPVHGVLDAIPNFIRVRISWNRLNELSRQLDIAEERQEGPPDNEW 816 N+ L+ Y+ VFLYMTGPVHG+L IPN +VRIS++R++EL QL E+ + Sbjct: 758 NTELKNYVLVFLYMTGPVHGLLSTIPNIFQVRISYSRISELIEQLPSIEDSENEKKALGA 817 Query: 817 SEAAPVHLVAKDITYHYQSQEGEQFAVGPLNLSVRSGQVTFVTGGNGSGKSTLGKLITGL 876 + +++ + + Y Y ++ E F VGP++ + +SG++ F+TGGNGSGKSTL KLITGL Sbjct: 818 DSSEKLNISLRGVEYSYINENSEAFKVGPIDCTFKSGEIIFITGGNGSGKSTLAKLITGL 877 Query: 877 YKPDQGEILLNGRQAAPEELSQSFSAIFSDFHLFERLYGMETGDKSQEIQEYLQKLDIEH 936 Y+PD GEI LN + EL + FS +FSDF+LF+RLYG+++ +KS +I++YL+ L + Sbjct: 878 YQPDNGEITLNEVKTEISELVEKFSTVFSDFYLFKRLYGVDSINKSDDIKKYLELLHLSD 937 Query: 937 KVQIQQGAFSTVNLSTGQRKRLALLISCLEDRPIYLFDEWAADQDPEFRDYFYHVLIPEL 996 KV I+ G F T+ LSTGQRKRLALLI+ LEDRP+ LFDEWAADQDPEF+ +FY L+P+L Sbjct: 938 KVHIEDGEFDTLKLSTGQRKRLALLITYLEDRPVLLFDEWAADQDPEFKRFFYRTLLPDL 997 Query: 997 KQKGKCIIAITHDDRYFHMADQLLKM 1022 K +GKC+IA+THDDRYF AD+++KM Sbjct: 998 KTRGKCVIAVTHDDRYFDCADRIIKM 1023 >C2XEI0.1 C2XEI0_BACCE Cyclic peptide transporter Length = 1005 Score = 944 bits (2440), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/985 (46%), Positives = 658/985 (66%), Gaps = 10/985 (1%) Query: 40 IEAWINKNMREGKIPGASVVIVKGEQTVYSKGFGDSDVAAKRPVTPETLFELGSTSKAFT 99 I+ I + + + IPG SVVIVKG +T+Y K +G +D+ KR VT ETLFELGSTSKAFT Sbjct: 14 IQKHIEEQISQAGIPGLSVVIVKGNETIYKKNYGYADIDNKRQVTNETLFELGSTSKAFT 73 Query: 100 ALAVLSLEKQGLLHMKDPVQKYLSWFQVSYAGEDGSGTSRVAGITLEQLLHHTSGLSFDT 159 ALAVL LEK+G + + D + KY+SWF++ Y G+ ITL LLHHTSG+ Sbjct: 74 ALAVLQLEKEGKIKLSDSLTKYVSWFEMEYKGKPYE-------ITLYDLLHHTSGIPEKA 126 Query: 160 ISDIPVGGDEQALERTVKAVVGAKLDFYPGERFQYASINYDILGLVIEKVTGESFEVYLK 219 I IP+ + ++E+T++ V+ L+ PG F+Y+++NYD+LGLVIEK T +SFE Y++ Sbjct: 127 IGYIPITNGKDSIEKTIRNVMPIGLNREPGSSFEYSTVNYDLLGLVIEKATNQSFERYVQ 186 Query: 220 NNVLNPLGLKNTYLFRTEAEQHEMARGYKLGFLKAREYQAPVYRGNTPAGYVISNGNDMA 279 ++VL+ L L +TY R A MA+GYK FL++ Y AP YRGNTPAGY ISN NDM Sbjct: 187 DHVLSKLDLLSTYAGREMAPLDNMAQGYKRNFLQSLPYDAPNYRGNTPAGYFISNINDME 246 Query: 280 AWLKIQMGGQAEAAVAADWIGRSHQPDRSVFPGLDGSSYAAGWFVYQKGSGELSHGGSNP 339 WLK+Q+G + + I SH+ +R V P +G+SYAAGW VYQ G GE+SHGGSNP Sbjct: 247 RWLKLQLGVEKPRMFPEELINDSHKANRKVAPDSNGASYAAGWEVYQSGGGEISHGGSNP 306 Query: 340 NYSSSVVFRPEEKIGVAVLANINSSYTQAMGQGIMEILHNQKLPENVSDQYRSVDKISTV 399 NYSS + FR EE+IGV VLAN+NS+YT +G ++ ++ ++++ + D+Y+ D+I T Sbjct: 307 NYSSYIGFRDEEQIGVVVLANLNSNYTYYIGSSLLNMMIDKEVKPLLYDEYKKTDQIGTA 366 Query: 400 ILCIAVPLILLTGWFFIMTIKEIITKERRLRRKTAKNIYXXXXXXXXXXXXSYCFYNIPS 459 + I+ +L I+EII ++R+ T K Y Y +P+ Sbjct: 367 LFVISSLCLLTLLVMLFHLIREIIFRKRKFILPTGKTWLHMVLVVAIYGLMIYALYQLPN 426 Query: 460 VLFSGLSWELVEVWAPSSFMIAIPGLLIGVFFFSVYYFTTSLFPKARDRTLFPIILLSTX 519 +LF GL W ++VWAPS+ ++AI + + ++ F FP+ + ++L +I+L Sbjct: 427 LLFGGLPWAFIKVWAPSTVVLAIYAIAGVGLAYVIHTFLNLCFPRQKGKSLLTLIVLGLI 486 Query: 520 XXXXXXXXXXXXXEALNHTNRFQVGLFSFFVMGIAVYVFGQRLVRTKLITLTNEMVFQKR 579 E +N + GL +FV+GI +YVF QR++RT +++ TNE+V++KR Sbjct: 487 SGFGNAFLIFVINETFVRSNNLENGLLFYFVLGIVMYVFSQRIIRTSIVSYTNELVYEKR 546 Query: 580 TDLIDKILRSSYQNIETIENERIYSVLNNDTETISGVTNILIFGVTSLVTLLCCFVYLGT 639 +L DK+L++ Y +E IE RI + LNNDTE IS N+L+ TSL+TLL CF+YLG Sbjct: 547 MELTDKLLQTPYYKLELIEKGRIEATLNNDTEVISRSLNLLVTAGTSLLTLLFCFLYLGV 606 Query: 640 INLLGLLISIAVILFAAGLYFLAGRHANQVWGETRDIQNTFFKFINHMVSGFKELSLHKG 699 +N+ L+S+ +I AG+Y L GR A++VW ETRDIQN +F+ I + GFKEL LH G Sbjct: 607 MNMYAFLLSLCIIFITAGVYSLIGRQADKVWNETRDIQNVYFRLIGDLRHGFKELRLHTG 666 Query: 700 KKEEFQQELKQSCDTYRIKRIQGDLSFANVFVMGELLFTLVIGVVAFIFPLLFKDISNSS 759 K+ +F++ + +SC+ YR+KR GD+ FANVFV+GELLF VIG+V F+FP +F ++ + Sbjct: 667 KRNDFREVMNESCNNYRVKRTIGDIKFANVFVLGELLFIFVIGIVVFVFPEIFVNMPKET 726 Query: 760 LRAYIFVFLYMTGPVHGVLDAIPNFIRVRISWNRLNELSRQLDIAEERQEGPPDNEWSEA 819 + Y+ VFLYMTGPV+ +L IP + VRISW R+ ++ + +D + ++ E+ + Sbjct: 727 ISNYVIVFLYMTGPVNEILGGIPQLVNVRISWQRIQQMVKSVDHIKANEQIATTKEYLD- 785 Query: 820 APVHLVAKDITYHYQSQEGE--QFAVGPLNLSVRSGQVTFVTGGNGSGKSTLGKLITGLY 877 P+ L ++++Y Y++++G+ F +GP+++ SG++ F+ GGNGSGKSTL KLITGLY Sbjct: 786 VPICLQLQNVSYKYKNKDGDFTGFGIGPIDMEFNSGEIVFIAGGNGSGKSTLSKLITGLY 845 Query: 878 KPDQGEILLNGRQAAPEELSQSFSAIFSDFHLFERLYGMETGDKSQEIQEYLQKLDIEHK 937 +P++G ILLNG++ APEEL+Q +SAI SDFH+F+RLYG+ T EI YL+ L + K Sbjct: 846 EPNEGNILLNGKEIAPEELNQYYSAILSDFHVFDRLYGINTEGMKAEIDHYLELLQLSDK 905 Query: 938 VQIQQGAFSTVNLSTGQRKRLALLISCLEDRPIYLFDEWAADQDPEFRDYFYHVLIPELK 997 V I+ G F+T LSTGQ+KRLALL++ LEDRPI LFDEWAADQDP +R +FY L+P+++ Sbjct: 906 VGIENGRFTTTQLSTGQKKRLALLVTYLEDRPILLFDEWAADQDPGYRRFFYEELLPQMR 965 Query: 998 QKGKCIIAITHDDRYFHMADQLLKM 1022 KGKCIIAITHDD+YFH+AD+L+ M Sbjct: 966 AKGKCIIAITHDDQYFHLADKLIVM 990 >B5UXL3.1 B5UXL3_BACCE Cyclic peptide transporter Length = 1027 Score = 944 bits (2439), Expect = 0.0, Method: Compositional matrix adjust. Identities = 456/985 (46%), Positives = 657/985 (66%), Gaps = 10/985 (1%) Query: 40 IEAWINKNMREGKIPGASVVIVKGEQTVYSKGFGDSDVAAKRPVTPETLFELGSTSKAFT 99 I+ I + + + IPG SVVIVKG +T+Y K +G +D KR VT ETLFELGSTSKAFT Sbjct: 36 IQKHIEEQISQAGIPGLSVVIVKGNETIYKKNYGYADTNKKRQVTNETLFELGSTSKAFT 95 Query: 100 ALAVLSLEKQGLLHMKDPVQKYLSWFQVSYAGEDGSGTSRVAGITLEQLLHHTSGLSFDT 159 ALAVL LEK+G + + D + KY+SWF++ Y G+ ITL LLHHTSG+ Sbjct: 96 ALAVLQLEKEGKIKLSDSLTKYVSWFEMEYKGKPYE-------ITLYDLLHHTSGIPEKA 148 Query: 160 ISDIPVGGDEQALERTVKAVVGAKLDFYPGERFQYASINYDILGLVIEKVTGESFEVYLK 219 I IP+ + ++E+T++ V+ L+ PG F+Y+++NYD+LGLVIEK T +SFE Y++ Sbjct: 149 IGYIPITNGKDSIEKTIRNVMPIGLNREPGSSFEYSTVNYDLLGLVIEKATNQSFERYVQ 208 Query: 220 NNVLNPLGLKNTYLFRTEAEQHEMARGYKLGFLKAREYQAPVYRGNTPAGYVISNGNDMA 279 ++VL+ L L +TY R A MA+GYK FL++ Y AP YRGNTPAGY ISN NDM Sbjct: 209 DHVLSKLDLLSTYAGREMAPLDNMAQGYKRNFLQSLPYDAPNYRGNTPAGYFISNINDME 268 Query: 280 AWLKIQMGGQAEAAVAADWIGRSHQPDRSVFPGLDGSSYAAGWFVYQKGSGELSHGGSNP 339 WLK+Q+G + + I SH+ +R V P +G+SYAAGW VYQ G GE+SHGGSNP Sbjct: 269 RWLKLQLGVEKPRMFPEELINDSHKANRKVAPDSNGASYAAGWEVYQSGGGEISHGGSNP 328 Query: 340 NYSSSVVFRPEEKIGVAVLANINSSYTQAMGQGIMEILHNQKLPENVSDQYRSVDKISTV 399 NYSS + FR EE+IGV VLAN+NS+YT +G ++ ++ ++++ + D+Y+ D+I T Sbjct: 329 NYSSYIGFRDEEQIGVVVLANLNSNYTYYIGSSLLNMMIDKEVKPLLYDEYKKTDQIGTA 388 Query: 400 ILCIAVPLILLTGWFFIMTIKEIITKERRLRRKTAKNIYXXXXXXXXXXXXSYCFYNIPS 459 + I+ +L I+EII ++R+ T K Y Y +P+ Sbjct: 389 LFVISSLCLLTLLVMLFHLIREIIFRKRKFILPTGKTWLHMVLVVAIYGLMIYALYQLPN 448 Query: 460 VLFSGLSWELVEVWAPSSFMIAIPGLLIGVFFFSVYYFTTSLFPKARDRTLFPIILLSTX 519 +LF GL W ++VWAPS+ ++AI + + ++ F FP+ + ++L +I+L Sbjct: 449 LLFGGLPWAFIKVWAPSTVVLAIYAIAGVGLAYVIHTFLNLCFPRQKGKSLLTLIVLGLI 508 Query: 520 XXXXXXXXXXXXXEALNHTNRFQVGLFSFFVMGIAVYVFGQRLVRTKLITLTNEMVFQKR 579 E +N + GL +FV+GI +YVF QR++RT +++ TNE+V++KR Sbjct: 509 SGFGNAFLIFVINETFVRSNNLENGLLFYFVLGIVMYVFSQRIIRTSIVSYTNELVYEKR 568 Query: 580 TDLIDKILRSSYQNIETIENERIYSVLNNDTETISGVTNILIFGVTSLVTLLCCFVYLGT 639 +L DK+L++ Y +E IE RI + LNNDTE IS N+L+ TSL+TLL CF+YLG Sbjct: 569 MELTDKLLQTPYYKLELIEKGRIEATLNNDTEVISRSLNLLVTAGTSLLTLLFCFLYLGV 628 Query: 640 INLLGLLISIAVILFAAGLYFLAGRHANQVWGETRDIQNTFFKFINHMVSGFKELSLHKG 699 +N+ L+S+ +I AG+Y L GR A++VW ETRDIQN +F+ I + GFKEL LH G Sbjct: 629 MNMYAFLLSLCIIFITAGVYSLIGRQADKVWNETRDIQNVYFRLIGDLRHGFKELRLHTG 688 Query: 700 KKEEFQQELKQSCDTYRIKRIQGDLSFANVFVMGELLFTLVIGVVAFIFPLLFKDISNSS 759 K+ +F++ + +SC+ YR+KR GD+ FANVFV+GELLF VIG+V F+FP +F ++ + Sbjct: 689 KRNDFREVMNESCNNYRVKRTIGDIKFANVFVLGELLFIFVIGIVVFVFPEIFVNMPKET 748 Query: 760 LRAYIFVFLYMTGPVHGVLDAIPNFIRVRISWNRLNELSRQLDIAEERQEGPPDNEWSEA 819 + Y+ VFLYMTGPV+ +L IP + VRISW R+ ++ + +D + ++ E+ + Sbjct: 749 ISNYVIVFLYMTGPVNEILGGIPQLVNVRISWQRIQQMVKSVDHIKANEQIATTKEYLD- 807 Query: 820 APVHLVAKDITYHYQSQEGE--QFAVGPLNLSVRSGQVTFVTGGNGSGKSTLGKLITGLY 877 P+ L ++++Y Y++++G+ F +GP+++ SG++ F+ GGNGSGKSTL KLITGLY Sbjct: 808 VPICLQLQNVSYKYKNKDGDFTGFGIGPIDMEFNSGEIVFIAGGNGSGKSTLSKLITGLY 867 Query: 878 KPDQGEILLNGRQAAPEELSQSFSAIFSDFHLFERLYGMETGDKSQEIQEYLQKLDIEHK 937 +P++G ILLNG++ APEEL+Q +SAI SDFH+F+RLYG+ T EI YL+ L + K Sbjct: 868 EPNEGNILLNGKEIAPEELNQYYSAILSDFHVFDRLYGINTEGMKAEIDHYLELLQLSDK 927 Query: 938 VQIQQGAFSTVNLSTGQRKRLALLISCLEDRPIYLFDEWAADQDPEFRDYFYHVLIPELK 997 V I+ G F+T LSTGQ+KRLALL++ LEDRPI LFDEWAADQDP +R +FY L+P+++ Sbjct: 928 VGIENGRFTTTQLSTGQKKRLALLVTYLEDRPILLFDEWAADQDPGYRRFFYEELLPQMR 987 Query: 998 QKGKCIIAITHDDRYFHMADQLLKM 1022 KGKCIIAITHDD+YFH+AD+L+ M Sbjct: 988 AKGKCIIAITHDDQYFHLADKLIVM 1012 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.321 0.137 0.405 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 5,882,592,859 Number of extensions: 250677630 Number of successful extensions: 948025 Number of sequences better than 1.0e-05: 30026 Number of HSP's gapped: 944493 Number of HSP's successfully gapped: 30179 Length of query: 1036 Length of database: 3,060,696,203 Length adjustment: 146 Effective length of query: 890 Effective length of database: 1,685,228,013 Effective search space: 1499852931570 Effective search space used: 1499852931570 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 137 (57.4 bits)