BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0184.0018.p (426 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C3J351.1 C3J351_9BACI Putative uncharacterized protein 600 e-169 B7YCN5.1 B7YCN5_9BACI Putative uncharacterized protein 600 e-169 B1DGF3.1 B1DGF3_9BACL Putative uncharacterized protein 587 e-166 Q9KBQ5.1 Q9KBQ5_BACHD BH1870 protein 580 e-163 C2D030.1 C2D030_LACBR Alpha-galactosidase 496 e-138 >C3J351.1 C3J351_9BACI Putative uncharacterized protein Length = 433 Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust. Identities = 279/418 (66%), Positives = 330/418 (78%) Query: 1 MNHKLAAPTPPLGWNSWDCYGAAVTEDEIRGNAEYMAEHLKDFGWSYITVDIQWYEPHAN 60 M+H A TPP+GWNSWDCYGA+VTEDE++GNAEYMA++LK FGW Y+ VDIQWYEP AN Sbjct: 1 MHHYQWAKTPPMGWNSWDCYGASVTEDEVKGNAEYMAKYLKPFGWEYVVVDIQWYEPGAN 60 Query: 61 SSQYRPFVPLVMDEYSRLMPAANRFPSAADGQGFKPLADYVHSLGLQFGIHIMRGIPRQA 120 SS YRPFVPL MDEYSRLMPA NRFPS G+GFKPLADY+H+LGL+FGIHIMRGIPRQA Sbjct: 61 SSIYRPFVPLEMDEYSRLMPAVNRFPSTKGGKGFKPLADYIHNLGLKFGIHIMRGIPRQA 120 Query: 121 VHAATPILGTTATARDVAHTNSICPWNTDMYGVDASKEGAQAYYDSLFELYAQWGVDLVK 180 VH TPILGT ARD+A TNSICPWNTDMYGVD KEGAQAYYDSLF+LYAQWGVD VK Sbjct: 121 VHQNTPILGTNVGARDIADTNSICPWNTDMYGVDHRKEGAQAYYDSLFQLYAQWGVDFVK 180 Query: 181 VDDIAASRLYDTHQPEIALISKAIERCGRPMVLSLSPGPAPVEYAGFFTGHANMWRVTDD 240 VDDIAAS+LY TH EI +I KAI+RCGRPMVLSLSPGPAP+++A F +ANMWR+TDD Sbjct: 181 VDDIAASKLYGTHTEEIKMIRKAIDRCGRPMVLSLSPGPAPLDHATLFVENANMWRMTDD 240 Query: 241 FWDQWPLLLDMFSRCRKWQGVPQAGSWPDCDMLPLGHIGIRSVDGGGADRWTRFTRDEQL 300 FWD+W LL DMF RC KW + G WPD DMLPLGHIGIRSVDGGG DR TRFT+DEQ Sbjct: 241 FWDRWELLYDMFERCYKWCKLVGPGHWPDADMLPLGHIGIRSVDGGGTDRMTRFTKDEQR 300 Query: 301 TMMSLWSIFRSPLIFGGELRDNDDWTLSLLTNRGVLRMHRESYGAKEALCKDELIVWTAG 360 TMM+LW IFRSPL+FGGELRDND+WTLSLLTN VL +H+ YGA++ +++ +VWT+ Sbjct: 301 TMMTLWIIFRSPLMFGGELRDNDEWTLSLLTNEEVLHVHQNGYGARQVYRENDHVVWTSQ 360 Query: 361 HTDGTRYAAVFNVGESPLQLDLALEEIGLSGTAAGTELWSGTPAELNAGSLQTTIPPH 418 +G ++ A+FN+ E + ++L+++G +LW+ L L + PH Sbjct: 361 DAEGNQFVAMFNISEKRSVVSVSLKDLGCMEPMKARDLWAKEDLGLVKHQLAFELGPH 418 >B7YCN5.1 B7YCN5_9BACI Putative uncharacterized protein Length = 433 Score = 600 bits (1546), Expect = e-169, Method: Compositional matrix adjust. Identities = 279/418 (66%), Positives = 330/418 (78%) Query: 1 MNHKLAAPTPPLGWNSWDCYGAAVTEDEIRGNAEYMAEHLKDFGWSYITVDIQWYEPHAN 60 M+H A TPP+GWNSWDCYGA+VTEDE++GNAEYMA++LK FGW Y+ VDIQWYEP AN Sbjct: 1 MHHYQWAKTPPMGWNSWDCYGASVTEDEVKGNAEYMAKYLKPFGWEYVVVDIQWYEPGAN 60 Query: 61 SSQYRPFVPLVMDEYSRLMPAANRFPSAADGQGFKPLADYVHSLGLQFGIHIMRGIPRQA 120 SS YRPFVPL MDEYSRLMPA NRFPS G+GFKPLADY+H+LGL+FGIHIMRGIPRQA Sbjct: 61 SSIYRPFVPLEMDEYSRLMPAVNRFPSTKGGKGFKPLADYIHNLGLKFGIHIMRGIPRQA 120 Query: 121 VHAATPILGTTATARDVAHTNSICPWNTDMYGVDASKEGAQAYYDSLFELYAQWGVDLVK 180 VH TPILGT ARD+A TNSICPWNTDMYGVD KEGAQAYYDSLF+LYAQWGVD VK Sbjct: 121 VHQNTPILGTNVGARDIADTNSICPWNTDMYGVDHRKEGAQAYYDSLFQLYAQWGVDFVK 180 Query: 181 VDDIAASRLYDTHQPEIALISKAIERCGRPMVLSLSPGPAPVEYAGFFTGHANMWRVTDD 240 VDDIAAS+LY TH EI +I KAI+RCGRPMVLSLSPGPAP+++A F +ANMWR+TDD Sbjct: 181 VDDIAASKLYGTHTEEIKMIRKAIDRCGRPMVLSLSPGPAPLDHATLFVENANMWRMTDD 240 Query: 241 FWDQWPLLLDMFSRCRKWQGVPQAGSWPDCDMLPLGHIGIRSVDGGGADRWTRFTRDEQL 300 FWD+W LL DMF RC KW + G WPD DMLPLGHIGIRSVDGGG DR TRFT+DEQ Sbjct: 241 FWDRWELLYDMFERCYKWCKLVGPGHWPDADMLPLGHIGIRSVDGGGTDRMTRFTKDEQR 300 Query: 301 TMMSLWSIFRSPLIFGGELRDNDDWTLSLLTNRGVLRMHRESYGAKEALCKDELIVWTAG 360 TMM+LW IFRSPL+FGGELRDND+WTLSLLTN VL +H+ YGA++ +++ +VWT+ Sbjct: 301 TMMTLWIIFRSPLMFGGELRDNDEWTLSLLTNEEVLHVHQNGYGARQVYRENDHVVWTSQ 360 Query: 361 HTDGTRYAAVFNVGESPLQLDLALEEIGLSGTAAGTELWSGTPAELNAGSLQTTIPPH 418 +G ++ A+FN+ E + ++L+++G +LW+ L L + PH Sbjct: 361 DAEGNQFVAMFNISEKRSVVSVSLKDLGCMEPMKARDLWAKEDLGLVKHQLAFELGPH 418 >B1DGF3.1 B1DGF3_9BACL Putative uncharacterized protein Length = 427 Score = 587 bits (1512), Expect = e-166, Method: Compositional matrix adjust. Identities = 281/427 (65%), Positives = 331/427 (77%), Gaps = 5/427 (1%) Query: 1 MNHKLAAPTPPLGWNSWDCYGAAVTEDEIRGNAEYMAEHLKDFGWSYITVDIQWYEPHAN 60 M H APTPPLGWNSWDCYGA V EDE+RGNA+YMAEHLK FGW Y+ VDIQWYEP A Sbjct: 1 MQHLEFAPTPPLGWNSWDCYGATVREDEVRGNADYMAEHLKAFGWEYVVVDIQWYEPGAV 60 Query: 61 SSQYRPFVPLVMDEYSRLMPAANRFPSAADGQGFKPLADYVHSLGLQFGIHIMRGIPRQA 120 S YRPFV L MD+YSRL+PA NRFPSA DGQGFKPLADYVHSLGL+FGIHIMRGIPRQA Sbjct: 61 SDLYRPFVRLEMDDYSRLIPAVNRFPSAEDGQGFKPLADYVHSLGLKFGIHIMRGIPRQA 120 Query: 121 VHAATPILGTTATARDVAHTNSICPWNTDMYGVDASKEGAQAYYDSLFELYAQWGVDLVK 180 VH TPI GT+ TARD+AHT S C WNTDMYGVDA KEGAQ YY+SLFE+YA+WGVD +K Sbjct: 121 VHDNTPIKGTSLTARDIAHTCSFCGWNTDMYGVDAKKEGAQEYYNSLFEMYAEWGVDYIK 180 Query: 181 VDDIAASRLY-DTHQPEIALISKAIERCGRPMVLSLSPGPAPVEYAGFFTGHANMWRVTD 239 VDDIA S L+ H EI LI KAI+ GRP+VLSLSPGPAPV++A F +AN+WR+TD Sbjct: 181 VDDIADSWLHGGAHLGEIELIRKAIDHVGRPIVLSLSPGPAPVKHADFLEQNANLWRMTD 240 Query: 240 DFWDQWPLLLDMFSRCRKWQGVPQAGSWPDCDMLPLGHIGIRSVDGGGADRWTRFTRDEQ 299 DFWD+WPLLLDMF RC+ W+G P+ G+WPDCDMLPLG IG+R DR T FTRDEQ Sbjct: 241 DFWDRWPLLLDMFDRCKTWEGRPKPGNWPDCDMLPLGRIGVRC---SHPDRMTNFTRDEQ 297 Query: 300 LTMMSLWSIFRSPLIFGGELRDNDDWTLSLLTNRGVLRMHRESYGAKEALCKDELIVWTA 359 LTMM+LWSIFRSPL+ GGE+RDND+WTLSLLTNR VL MHR S+GAK+ + +VWTA Sbjct: 298 LTMMTLWSIFRSPLMMGGEMRDNDEWTLSLLTNRDVLHMHRTSFGAKQVSRIGDRVVWTA 357 Query: 360 GHTDGTRYAAVFNVGESPLQLDLALEEIGLSGTAAGTE-LWSGTPAELNAGSLQTTIPPH 418 ++G RY A+FN GE ++ ++ ++G+ G A+ + +WSG + SL + I PH Sbjct: 358 EGSNGERYVALFNTGEEETEVSVSFGDLGMDGEASSIKNVWSGEIIGTQSSSLSSVIAPH 417 Query: 419 GVRLYSF 425 G L+ Sbjct: 418 GAALFRL 424 >Q9KBQ5.1 Q9KBQ5_BACHD BH1870 protein Length = 432 Score = 580 bits (1495), Expect = e-163, Method: Compositional matrix adjust. Identities = 270/422 (63%), Positives = 325/422 (77%), Gaps = 10/422 (2%) Query: 3 HKLAAPTPPLGWNSWDCYGAAVTEDEIRGNAEYMAEHLKDFGWSYITVDIQWYEPHANSS 62 ++L+A TPP+GWNSWDCYGA+VTE+E+ GNAEYMA HLK +GW YI VDIQWYEP ANSS Sbjct: 4 NRLSALTPPMGWNSWDCYGASVTEEEVLGNAEYMANHLKKYGWEYIVVDIQWYEPTANSS 63 Query: 63 QYRPFVPLVMDEYSRLMPAANRFPSAADGQGFKPLADYVHSLGLQFGIHIMRGIPRQAVH 122 Y PF PL MDEY RL+PA NRFPSA +G GFKPL+D +H LGL+FGIHIMRGIPRQAV+ Sbjct: 64 AYNPFAPLCMDEYGRLLPATNRFPSAKNGAGFKPLSDAIHDLGLKFGIHIMRGIPRQAVY 123 Query: 123 AATPILGTTATARDVAHTNSICPWNTDMYGVDASKEGAQAYYDSLFELYAQWGVDLVKVD 182 +P+LG+T TAR++AHTNSICPWNTDMYGVD +KEGAQ+YY+SLFELYAQWGVD VKVD Sbjct: 124 ENSPVLGSTKTAREIAHTNSICPWNTDMYGVDPTKEGAQSYYNSLFELYAQWGVDFVKVD 183 Query: 183 DIAASRLYDTHQPEIALISKAIERCGRPMVLSLSPGPAPVEYAGFFTGHANMWRVTDDFW 242 DIAASRLYDTH EI +I +AI+ CGRPMVLSLSPGPAP++YA F +ANMWR+TDDFW Sbjct: 184 DIAASRLYDTHLEEIKMIQRAIQACGRPMVLSLSPGPAPIKYAHHFKTNANMWRITDDFW 243 Query: 243 DQWPLLLDMFSRCRKWQGVPQAGSWPDCDMLPLGHIGIRSVDGGGADRWTRFTRDEQLTM 302 D W LL MF RC W+ G WPDCDMLPLGHIGIRSVDG G DRWTRFT+DEQLTM Sbjct: 244 DDWSLLYQMFERCEVWEKHIGTGHWPDCDMLPLGHIGIRSVDGPGGDRWTRFTKDEQLTM 303 Query: 303 MSLWSIFRSPLIFGGELRDNDDWTLSLLTNRGVLRMHRESYGAKEALCKDELIVWTAGHT 362 M+LW+I RSPL+FGGELRDND+WTLSLLTN G+L ++++S + +++ + W A Sbjct: 304 MNLWAICRSPLMFGGELRDNDEWTLSLLTNEGILSINQKSVLNRFVYREEDKVAWAANGR 363 Query: 363 DGTRYAAVFNVGESPLQLDLALEEIGLSGTAAGTELW------SGTPAELNAGSLQTTIP 416 +G Y A+FN+ + L L+ +G+ T +W S P+E S Q + Sbjct: 364 NGEAYVALFNLHDQQKTLQFRLDMVGIMETVQLFNVWDRSFLQSLAPSE----SFQIELK 419 Query: 417 PH 418 PH Sbjct: 420 PH 421 >C2D030.1 C2D030_LACBR Alpha-galactosidase Length = 435 Score = 496 bits (1276), Expect = e-138, Method: Compositional matrix adjust. Identities = 235/375 (62%), Positives = 281/375 (74%), Gaps = 3/375 (0%) Query: 7 APTPPLGWNSWDCYGAAVTEDEIRGNAEYMAEHLKDFGWSYITVDIQWYEPHANSSQYRP 66 A PP GWNSWD YGA+V EDE++ NA+YM++HLK FGW YITVDIQWYEP A+SS+Y Sbjct: 17 AKVPPKGWNSWDGYGASVREDEVKRNADYMSQHLKQFGWQYITVDIQWYEPSADSSKYHD 76 Query: 67 FVPLVMDEYSRLMPAANRFPSAADGQGFKPLADYVHSLGLQFGIHIMRGIPRQAVHAATP 126 F PLVMD+YSRL+P RFPSA +G GFKPLADYVH LGL+FGIHIMRGIPRQAVH A+P Sbjct: 77 FAPLVMDDYSRLLPDPKRFPSATNGSGFKPLADYVHHLGLKFGIHIMRGIPRQAVHKASP 136 Query: 127 ILGTTATARDVAHTNSICPWNTDMYGVDASKEGAQAYYDSLFELYAQWGVDLVKVDDIAA 186 I GT TARD+A N+ICPWN+DMYGV+ Q YYDSL LYA WGVD +K DDIA Sbjct: 137 IKGTDKTARDIA-LNNICPWNSDMYGVNVDMPEGQGYYDSLMALYASWGVDFIKCDDIAN 195 Query: 187 SRLYD-THQPEIALISKAIERCGRPMVLSLSPGPAPVEYAGFFTGHANMWRVTDDFWDQW 245 S +Y+ TH+ E+ + KAI++ GR MVLSLSPGPAPVE FF ANMWR+TDDFWD+W Sbjct: 196 SVIYNGTHKKEVEALRKAIDKTGRDMVLSLSPGPAPVENGAFFQHTANMWRITDDFWDEW 255 Query: 246 PLLLDMFSRCRKWQGVPQAGSWPDCDMLPLGHIGIRSVDGGGADRWTRFTRDEQLTMMSL 305 LLL+MF R KW + + G+WPDCDMLPLGHIGIRSVDG G +R TRFT+ EQ TMM+L Sbjct: 256 SLLLNMFDRAEKWSSMSRPGNWPDCDMLPLGHIGIRSVDGPGGNRQTRFTKAEQKTMMTL 315 Query: 306 WSIFRSPLIFGGELRDNDDWTLSLLTNRGVLRMHRESYGAKEALCKDELIVWTAGHTDGT 365 WS+ +SPLI GGEL D DDWT LLTNR +L+M + ++I+W A +D + Sbjct: 316 WSLMQSPLIMGGELPDLDDWTSRLLTNRELLKMDDRITEKYQIYRDKKMIIWYAASSD-S 374 Query: 366 RYAAVFNVGESPLQL 380 Y A+FNV + L L Sbjct: 375 EYHAIFNVSDDELTL 389 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.320 0.136 0.446 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,902,378,159 Number of extensions: 129327877 Number of successful extensions: 316983 Number of sequences better than 1.0e-05: 385 Number of HSP's gapped: 316165 Number of HSP's successfully gapped: 501 Length of query: 426 Length of database: 3,060,696,203 Length adjustment: 138 Effective length of query: 288 Effective length of database: 1,760,596,133 Effective search space: 507051686304 Effective search space used: 507051686304 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 133 (55.8 bits)