BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0183.0016.p
         (110 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A6LZC9.1 A6LZC9_CLOB8 Putative uncharacterized protein                121   2e-26
A1ZDM9.1 A1ZDM9_9SPHI Putative uncharacterized protein                105   9e-22
B0PAF9.1 B0PAF9_9FIRM Putative uncharacterized protein                 66   1e-09

>A6LZC9.1 A6LZC9_CLOB8 Putative uncharacterized protein
          Length = 104

 Score =  121 bits (304), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 53/95 (55%), Positives = 67/95 (70%)

Query: 15  HHCNLNIWVHLPDEVWDKVANIYELMPGWKGYTDGIPHWFGQEEDDVYMQASVEPSGLSF 74
           H+ NLNI    PD +WDK+A +Y  MPGW G+ DGIPHW+ Q+ D   + ASVEPSGL F
Sbjct: 4   HNHNLNINYSSPDYIWDKLAELYSKMPGWSGFIDGIPHWYAQDNDKRIVTASVEPSGLQF 63

Query: 75  HAQMNQSEWDSWMDRFKSETTRVLGFEVGEPEDGV 109
           +A+M Q EWD W   FK++ +  LGFE+GEPEDG 
Sbjct: 64  YAEMQQEEWDEWFKLFKTKASATLGFEIGEPEDGF 98


>A1ZDM9.1 A1ZDM9_9SPHI Putative uncharacterized protein
          Length = 100

 Score =  105 bits (263), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 48/99 (48%), Positives = 70/99 (70%), Gaps = 1/99 (1%)

Query: 9   VNEINAHHCNLNIWVHLPDEVWDKVANIYELMPGWKGYT-DGIPHWFGQEEDDVYMQASV 67
           +++ +  HCNLNI  +LP +VW+K+  +Y+ +PGWKG++ +GIPHWFG + D+V + ASV
Sbjct: 1   MSQFSPQHCNLNIHYNLPKKVWNKMPKVYKQLPGWKGWSKEGIPHWFGYDHDEVSISASV 60

Query: 68  EPSGLSFHAQMNQSEWDSWMDRFKSETTRVLGFEVGEPE 106
           EPSGL F   ++   ++ W+  FK   T VLGFEV EPE
Sbjct: 61  EPSGLQFSGNLDAEVFEVWIATFKQIATNVLGFEVVEPE 99


>B0PAF9.1 B0PAF9_9FIRM Putative uncharacterized protein
          Length = 96

 Score = 65.9 bits (159), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 15  HHCNLNIWVHLPDEVWDKVANIYELMPGWKGYTDGIPHWFGQEEDDVYMQASVEPSGLSF 74
           H  NLNI   +  E WDK+  +Y+ MP W G  D    W G+  D   + AS E SG+  
Sbjct: 3   HTVNLNIHYSVCKETWDKILQVYKSMPYWAG-DDKDVKWIGKGID---LWASAERSGIQI 58

Query: 75  HAQMNQSEWDSWMDRFKSETTRVLGFEVGEPEDG 108
             +M +  WD W    K + T+ LG+E+GE E+G
Sbjct: 59  AGRMPECIWDEWYRTLKYKLTKSLGYEIGELEEG 92


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.316    0.135    0.450 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 768,899,825
Number of extensions: 29447029
Number of successful extensions: 63556
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 63555
Number of HSP's successfully gapped: 3
Length of query: 110
Length of database: 3,060,696,203
Length adjustment: 77
Effective length of query: 33
Effective length of database: 2,335,278,048
Effective search space: 77064175584
Effective search space used: 77064175584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 126 (53.1 bits)