BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0183.0014.p (150 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value A6NT80.1 A6NT80_9BACE Putative uncharacterized protein 171 1e-41 B0P6H9.1 B0P6H9_9FIRM Putative uncharacterized protein 143 4e-33 A6TU63.1 A6TU63_ALKMQ 5'-Nucleotidase domain protein 142 8e-33 B2UXA7.1 B2UXA7_CLOBA 2', 3'-cuclic nucleotide 2'-phosphodiesterase 126 8e-28 C2JRZ6.1 C2JRZ6_ENTFA 5'-nucleotidase family protein EC=3.1.3.6 ... 125 1e-27 >A6NT80.1 A6NT80_9BACE Putative uncharacterized protein Length = 709 Score = 171 bits (434), Expect = 1e-41, Method: Composition-based stats. Identities = 80/147 (54%), Positives = 105/147 (71%), Gaps = 1/147 (0%) Query: 1 VYRIYPFDNVLYVVTVTGQELRAYMEVSATHFNQWQPGDREITANPEVPSYLYDMFAGID 60 ++ IY + NVLY V VTG E++AYME +A +NQWQPGD I+ NP+ YL+D F G++ Sbjct: 402 MFDIYKYPNVLYTVKVTGAEMKAYMEWAAECWNQWQPGDINISFNPDKAGYLHDHFIGLN 461 Query: 61 YQIDLSQPAGHRIINVLYQGQPLADTQQLQLAVNNYRYSSLLKASKLVSRAKHWESSCSV 120 Y+++LS+PAG RI NV ++GQPL D Q L L VN+YRY+ LK ++S K WESS SV Sbjct: 462 YEVNLSKPAGQRIENVTFKGQPLTDDQVLTLCVNDYRYTG-LKNEGIISGEKEWESSASV 520 Query: 121 RDMLVSYIKEQGTLSPEVDNNWSIVGI 147 RDMLV+Y+ E L P VDNNW I G+ Sbjct: 521 RDMLVAYLAEHDPLEPVVDNNWKITGV 547 >B0P6H9.1 B0P6H9_9FIRM Putative uncharacterized protein Length = 677 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 71/146 (48%), Positives = 96/146 (65%), Gaps = 3/146 (2%) Query: 3 RIYPFDNVLYVVTVTGQELRAYMEVSATHF-NQWQPGDREITANPEVPSYLYDMFAGIDY 61 +IY +DN L+ V VTG +L+ ME A +F NQ+QPGD I+ NP++ Y YDMFAG++Y Sbjct: 398 KIYKYDNTLFAVKVTGAQLKKIMEQQAGNFFNQYQPGDVTISFNPDIRMYNYDMFAGVNY 457 Query: 62 QIDLSQPAGHRIINVLYQGQPLADTQQLQLAVNNYRYSSLLKASKLVSRAKHWESSCSVR 121 +ID+S+P G RI+NV YQG+PL D Q L LA+NNYRY L+ A L+ + +VR Sbjct: 458 EIDISKPEGSRIVNVTYQGEPLRDDQSLVLALNNYRYGGLVSAG-LIQESDVVYEGGAVR 516 Query: 122 DMLVSYIKEQGT-LSPEVDNNWSIVG 146 DM+ Y+ L P DNNW I+G Sbjct: 517 DMITEYVAGLSEPLMPVCDNNWKIIG 542 >A6TU63.1 A6TU63_ALKMQ 5'-Nucleotidase domain protein Length = 729 Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 64/146 (43%), Positives = 95/146 (65%) Query: 1 VYRIYPFDNVLYVVTVTGQELRAYMEVSATHFNQWQPGDREITANPEVPSYLYDMFAGID 60 ++ IY + N LY V VTG EL+ YME SA+++N ++PGD I+ NP++ Y YDMF G+D Sbjct: 403 IFGIYKYPNTLYGVEVTGAELKNYMEWSASYYNTYKPGDITISFNPDIRGYNYDMFQGVD 462 Query: 61 YQIDLSQPAGHRIINVLYQGQPLADTQQLQLAVNNYRYSSLLKASKLVSRAKHWESSCSV 120 Y++D+SQ G RI+++ + G+ + D LA+NNYRY+ LL + + + A S+ Sbjct: 463 YKVDISQEPGDRIVDLTFNGESVMDDDTFNLAINNYRYNGLLDSGIISNDAYFISDPKSL 522 Query: 121 RDMLVSYIKEQGTLSPEVDNNWSIVG 146 R + YI E T+ PEVDNNW I+G Sbjct: 523 RSYIFDYISEMETIDPEVDNNWEIIG 548 >B2UXA7.1 B2UXA7_CLOBA 2', 3'-cuclic nucleotide 2'-phosphodiesterase Length = 659 Score = 126 bits (316), Expect = 8e-28, Method: Composition-based stats. Identities = 63/159 (39%), Positives = 98/159 (61%), Gaps = 16/159 (10%) Query: 4 IYPFDNVLYVVTVTGQELRAYMEVSATHFNQWQPGDREITANPEVPSYLYDMFAGIDYQI 63 IY FDN LY + +TG +L+ YME S ++N++ PGD ++ NP P Y +DMFAG+ Y + Sbjct: 456 IYKFDNTLYALKITGSQLKKYMEWSFAYYNKYNPGDLTVSFNPNTPGYNFDMFAGVKYNV 515 Query: 64 DLSQPAGHRIINVL-YQGQPLADTQQLQLAVNNYRYSSLLKASKLVSR---------AKH 113 D+S+ AG+RI+N+ G + D+ +L L VNNYR ++ L ++ + K Sbjct: 516 DISKDAGNRIVNLTKMDGSKINDSDELYLTVNNYRGATQLLTPGVIFKEGEQLPTLVGKS 575 Query: 114 WESS----CSVRDMLVSYIKE--QGTLSPEVDNNWSIVG 146 E++ +RD++ YIKE GT++P+ DNNWSI+G Sbjct: 576 EETAGLGEGRIRDLIGQYIKEVKGGTITPKCDNNWSIIG 614 >C2JRZ6.1 C2JRZ6_ENTFA 5'-nucleotidase family protein EC=3.1.3.6 (Fragment) Length = 886 Score = 125 bits (314), Expect = 1e-27, Method: Composition-based stats. Identities = 59/148 (39%), Positives = 88/148 (59%), Gaps = 2/148 (1%) Query: 1 VYRIYPFDNVLYVVTVTGQELRAYMEVSATHFNQWQPGDREITANPEVPSYLYDMFAGID 60 ++ IY + N L V + G+ L Y+E ++NQ QP D I+ NP + Y YDM +G+D Sbjct: 58 IFDIYKYPNTLVSVPINGENLLKYLEKQGAYYNQTQPDDLTISFNPNIRVYNYDMISGVD 117 Query: 61 YQIDLSQPAGHRIINVLYQGQPLADTQQLQLAVNNYRYSSLLKASKLVSRAKHWESSCSV 120 Y+ID+S+P G RI++ GQPL ++ +A+NNYRY L V ++ Sbjct: 118 YKIDISKPVGERIVDAKIDGQPLDPAKEYTIAMNNYRYGGLASQGIQVGEPIKNSDPETL 177 Query: 121 RDMLVSYIKEQGTLSP--EVDNNWSIVG 146 R M+V YIK++GTL P E++ NWSI+G Sbjct: 178 RGMIVDYIKKKGTLDPEQEIERNWSIIG 205 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.134 0.399 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 922,688,236 Number of extensions: 34682779 Number of successful extensions: 78182 Number of sequences better than 1.0e-05: 774 Number of HSP's gapped: 76806 Number of HSP's successfully gapped: 774 Length of query: 150 Length of database: 3,060,696,203 Length adjustment: 112 Effective length of query: 38 Effective length of database: 2,005,542,523 Effective search space: 76210615874 Effective search space used: 76210615874 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 126 (53.1 bits)