BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0183.0007.p (336 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KAD8.1 B3KAD8_9BACI Carbohydrate-binding family V/XII 515 e-144 B7XCV4.1 B7XCV4_9RALS Lysozyme-like chitinolytic enzyme 261 8e-68 A6LX99.1 A6LX99_CLOB8 Carbohydrate-binding family V/XII 244 1e-62 A6LVP4.1 A6LVP4_CLOB8 Lytic transglycosylase, catalytic 238 5e-61 A6LX94.1 A6LX94_CLOB8 Beta and gamma crystallin 134 1e-29 >B3KAD8.1 B3KAD8_9BACI Carbohydrate-binding family V/XII Length = 338 Score = 515 bits (1326), Expect = e-144, Method: Compositional matrix adjust. Identities = 253/294 (86%), Positives = 270/294 (91%), Gaps = 1/294 (0%) Query: 44 YAVNDTVTYSGSTYTCLQAHTSLTGWEPPNVPALWQSGGXXXXXXXXXXAT-NGVTFYAD 102 YAVNDTVTYSGSTYTCLQAHTSL GWEP NVPALWQ GG T NGVTFYAD Sbjct: 45 YAVNDTVTYSGSTYTCLQAHTSLVGWEPSNVPALWQKGGSGGTTPPTTPPTTNGVTFYAD 104 Query: 103 INYGGKAVTLGVGNYVLSQLNAAGIPNDWMSSLKVPSGWTVEVYEDENFGGTKWTFTASS 162 INYGGKAVTLG+GNY LSQLNA GIPNDWMSSLKVPSGWTVEVYE++NFGGTKWTFT+ S Sbjct: 105 INYGGKAVTLGIGNYTLSQLNANGIPNDWMSSLKVPSGWTVEVYENDNFGGTKWTFTSDS 164 Query: 163 SWVGDSVNDKMTSVKIYTGSPPASVTRPSEVPSQIWTYVMNVDNKFGKGGDFALLLSAVI 222 SWVG+++NDKM+SVKIYTGSPP +VT+P+EVPS IWTYVMN DN +GKGGDFALLLSAVI Sbjct: 165 SWVGNTINDKMSSVKIYTGSPPPTVTKPAEVPSHIWTYVMNADNAYGKGGDFALLLSAVI 224 Query: 223 KKESSFGAGLPGSPSAGDGLMQVEPNTRNAYLSQFSAKFGRSYNHSSEQDQVCLGALILD 282 KKESSFGAGLPGSPSAGDGLMQVEPNTRNAYLSQFS+KFGR+YNHSSEQDQV LGALIL+ Sbjct: 225 KKESSFGAGLPGSPSAGDGLMQVEPNTRNAYLSQFSSKFGRAYNHSSEQDQVYLGALILN 284 Query: 283 EKIVRFGNIYNGLLHYNGGDNWYPGATDSYGRPILADQYANAVYATYKGYGGKN 336 EKI +FGNIYNGLLHYNGGDNWYPGATDSYGRPILADQYA+AVYATYKGYGGKN Sbjct: 285 EKITKFGNIYNGLLHYNGGDNWYPGATDSYGRPILADQYADAVYATYKGYGGKN 338 >B7XCV4.1 B7XCV4_9RALS Lysozyme-like chitinolytic enzyme Length = 252 Score = 261 bits (667), Expect = 8e-68, Method: Compositional matrix adjust. Identities = 123/145 (84%), Positives = 134/145 (92%) Query: 191 SEVPSQIWTYVMNVDNKFGKGGDFALLLSAVIKKESSFGAGLPGSPSAGDGLMQVEPNTR 250 +EVPS+IWTYVMN DN +GKGGDFALLLSAVIKKES FG GL GSPSAGDGLMQVEPNTR Sbjct: 107 AEVPSRIWTYVMNADNAYGKGGDFALLLSAVIKKESYFGDGLSGSPSAGDGLMQVEPNTR 166 Query: 251 NAYLSQFSAKFGRSYNHSSEQDQVCLGALILDEKIVRFGNIYNGLLHYNGGDNWYPGATD 310 NAYLSQFSAK+G +YNHSSEQDQV +G+LIL+EKIVRFG+IY+GLLHYNGGD WYPGATD Sbjct: 167 NAYLSQFSAKYGHAYNHSSEQDQVYMGSLILNEKIVRFGSIYSGLLHYNGGDYWYPGATD 226 Query: 311 SYGRPILADQYANAVYATYKGYGGK 335 SYGRPILADQYAN VYA YK YGG+ Sbjct: 227 SYGRPILADQYANTVYAQYKSYGGR 251 Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 43/78 (55%), Positives = 50/78 (64%), Gaps = 1/78 (1%) Query: 1 LNKKVPARALSVLIVLAVFLSVFFTXXXXXXXXXXXXXXXXXXYAVNDTVTYSGSTYTCL 60 + +KV +A S+L+ LAVFLS F YAVNDTVTY+GSTYTC+ Sbjct: 2 IRRKVSIKAASLLVALAVFLSTFLAVLPASAASRGAWAPNTS-YAVNDTVTYNGSTYTCI 60 Query: 61 QAHTSLTGWEPPNVPALW 78 QAHTSL GWEPP VPALW Sbjct: 61 QAHTSLVGWEPPVVPALW 78 >A6LX99.1 A6LX99_CLOB8 Carbohydrate-binding family V/XII Length = 311 Score = 244 bits (622), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 112/151 (74%), Positives = 132/151 (87%) Query: 186 SVTRPSEVPSQIWTYVMNVDNKFGKGGDFALLLSAVIKKESSFGAGLPGSPSAGDGLMQV 245 SV++P+E P IW Y +N DNKFGK GDFALL+ AVIKKE ++GAGL GSPS+GDGLMQV Sbjct: 161 SVSKPAEAPDDIWGYALNADNKFGKNGDFALLICAVIKKECNYGAGLGGSPSSGDGLMQV 220 Query: 246 EPNTRNAYLSQFSAKFGRSYNHSSEQDQVCLGALILDEKIVRFGNIYNGLLHYNGGDNWY 305 EPNTRNAY S+FS+ +G +YNHS+ QDQV +G++I+++ I +FGNIYNGLLHYNGG NWY Sbjct: 221 EPNTRNAYSSEFSSTYGHAYNHSNLQDQVYMGSMIINDNIKQFGNIYNGLLHYNGGPNWY 280 Query: 306 PGATDSYGRPILADQYANAVYATYKGYGGKN 336 PGATDSYGRPILADQYANAVYATYK YGGKN Sbjct: 281 PGATDSYGRPILADQYANAVYATYKSYGGKN 311 >A6LVP4.1 A6LVP4_CLOB8 Lytic transglycosylase, catalytic Length = 200 Score = 238 bits (608), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 110/150 (73%), Positives = 126/150 (84%) Query: 186 SVTRPSEVPSQIWTYVMNVDNKFGKGGDFALLLSAVIKKESSFGAGLPGSPSAGDGLMQV 245 SV++PSEVPS IW Y NVD KF K GDFALLL AVIKKES+FGAGL GSPS+GDGLMQV Sbjct: 50 SVSKPSEVPSNIWKYAYNVDKKFSKNGDFALLLCAVIKKESNFGAGLSGSPSSGDGLMQV 109 Query: 246 EPNTRNAYLSQFSAKFGRSYNHSSEQDQVCLGALILDEKIVRFGNIYNGLLHYNGGDNWY 305 EP+TRNAY ++F + +GR+Y+H + QDQV LG LI+ E + +FG +YNGLLHYNGG NWY Sbjct: 110 EPSTRNAYAAKFKSTYGRTYDHGNLQDQVALGGLIIKEMVDQFGGVYNGLLHYNGGPNWY 169 Query: 306 PGATDSYGRPILADQYANAVYATYKGYGGK 335 PG TDSYGRPILADQYANAVY TYK YGGK Sbjct: 170 PGCTDSYGRPILADQYANAVYKTYKNYGGK 199 >A6LX94.1 A6LX94_CLOB8 Beta and gamma crystallin Length = 589 Score = 134 bits (338), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 62/87 (71%), Positives = 73/87 (83%) Query: 94 TNGVTFYADINYGGKAVTLGVGNYVLSQLNAAGIPNDWMSSLKVPSGWTVEVYEDENFGG 153 T VTFY DINYGG +V+L GNY LSQLN A IPNDWM+SLKVPSGWTV+VYE++NF G Sbjct: 119 TKAVTFYEDINYGGASVSLQPGNYTLSQLNTAKIPNDWMTSLKVPSGWTVDVYENDNFTG 178 Query: 154 TKWTFTASSSWVGDSVNDKMTSVKIYT 180 TKWT+T+ + WVG+ NDKMTSVKIY+ Sbjct: 179 TKWTYTSDTPWVGNDANDKMTSVKIYS 205 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.315 0.133 0.407 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,092,364,255 Number of extensions: 88747048 Number of successful extensions: 143340 Number of sequences better than 1.0e-05: 77 Number of HSP's gapped: 143380 Number of HSP's successfully gapped: 85 Length of query: 336 Length of database: 3,060,696,203 Length adjustment: 136 Effective length of query: 200 Effective length of database: 1,779,438,163 Effective search space: 355887632600 Effective search space used: 355887632600 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 131 (55.1 bits)