BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0183.0004.p
         (113 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A5D493.1 A5D493_PELTS Growth inhibitor                                161   2e-38
Q2RJQ4.1 Q2RJQ4_MOOTA Transcriptional modulator of MazE/toxin, MazF   157   3e-37
B4SBS6.1 B4SBS6_PELPB Transcriptional modulator of MazE/toxin, MazF   152   7e-36
Q3ATH3.1 Q3ATH3_CHLCH Transcriptional modulator of MazE/toxin, MazF   149   6e-35
C0GGW1.1 C0GGW1_9FIRM Transcriptional modulator of MazE/toxin, MazF   149   8e-35

>A5D493.1 A5D493_PELTS Growth inhibitor
          Length = 122

 Score =  161 bits (407), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 73/112 (65%), Positives = 92/112 (82%)

Query: 1   MVTGGYVPDRGDLIWLQFNPQAGHEQAGKRPALVVSPASYNRKVGLSLLCPVTSKQKDYP 60
           + +G YVP+RGD++WLQF+PQAGHEQAGKRPALV+SP  YN KVGL+L+CP+TS+ K YP
Sbjct: 2   VASGVYVPERGDVVWLQFDPQAGHEQAGKRPALVISPRPYNEKVGLALMCPITSRVKGYP 61

Query: 61  FEVVIPQDLPIEGVILADQVKSLDWQSRQAAFICKVPQIILSDVVAKLDLLI 112
           FEV +P DL + GV+LADQVKSLDWQ+R+A F CK P   + DVV K+ +LI
Sbjct: 62  FEVSLPADLAVSGVVLADQVKSLDWQARRAQFACKAPVEAVEDVVMKILVLI 113


>Q2RJQ4.1 Q2RJQ4_MOOTA Transcriptional modulator of MazE/toxin, MazF
          Length = 115

 Score =  157 bits (397), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 71/107 (66%), Positives = 90/107 (84%)

Query: 6   YVPDRGDLIWLQFNPQAGHEQAGKRPALVVSPASYNRKVGLSLLCPVTSKQKDYPFEVVI 65
           Y+P+RGD++WLQF+P+AGHEQAG+RPALV+SP  YN KVGL+L CPVT+K K YPFEV I
Sbjct: 8   YIPERGDIVWLQFDPRAGHEQAGRRPALVISPQLYNGKVGLALFCPVTTKAKGYPFEVEI 67

Query: 66  PQDLPIEGVILADQVKSLDWQSRQAAFICKVPQIILSDVVAKLDLLI 112
           P  L I GVILADQVKSLDW++R+A F CKVP  ++++V AK+ +LI
Sbjct: 68  PAGLKITGVILADQVKSLDWRAREAQFACKVPAGVVAEVQAKVQVLI 114


>B4SBS6.1 B4SBS6_PELPB Transcriptional modulator of MazE/toxin, MazF
          Length = 111

 Score =  152 bits (385), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 67/108 (62%), Positives = 87/108 (80%)

Query: 5   GYVPDRGDLIWLQFNPQAGHEQAGKRPALVVSPASYNRKVGLSLLCPVTSKQKDYPFEVV 64
            Y PDRGD++W+ FNPQAGHEQAG+RPALV+SP +YN KVGL+LLCP+TS+ K YPFEV+
Sbjct: 2   AYTPDRGDMVWIAFNPQAGHEQAGRRPALVLSPKAYNSKVGLALLCPITSQIKGYPFEVL 61

Query: 65  IPQDLPIEGVILADQVKSLDWQSRQAAFICKVPQIILSDVVAKLDLLI 112
           +P+ L I G IL+DQVKSLDW+ RQA  IC +P  ++ +V+ KL  L+
Sbjct: 62  LPEGLNINGAILSDQVKSLDWKIRQAELICLLPSSVVDEVLHKLHTLL 109


>Q3ATH3.1 Q3ATH3_CHLCH Transcriptional modulator of MazE/toxin, MazF
          Length = 116

 Score =  149 bits (377), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 67/111 (60%), Positives = 89/111 (80%)

Query: 3   TGGYVPDRGDLIWLQFNPQAGHEQAGKRPALVVSPASYNRKVGLSLLCPVTSKQKDYPFE 62
           T  Y+PD GD++W+ FNPQAGHEQAG+RPALV+SP +YN KVGL+LLCP+TS+ K YPFE
Sbjct: 6   TMAYIPDSGDIVWIMFNPQAGHEQAGRRPALVLSPKAYNGKVGLALLCPITSQIKGYPFE 65

Query: 63  VVIPQDLPIEGVILADQVKSLDWQSRQAAFICKVPQIILSDVVAKLDLLIR 113
           ++IP+ L ++G IL+DQVKSLDW++R+A FI K+P    + VV  L  LI+
Sbjct: 66  ILIPEGLEVKGAILSDQVKSLDWKARKAVFIGKLPAEKYNKVVKNLIALIQ 116


>C0GGW1.1 C0GGW1_9FIRM Transcriptional modulator of MazE/toxin, MazF
          Length = 112

 Score =  149 bits (376), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 62/112 (55%), Positives = 89/112 (79%)

Query: 1   MVTGGYVPDRGDLIWLQFNPQAGHEQAGKRPALVVSPASYNRKVGLSLLCPVTSKQKDYP 60
           MV   YVP RGD++WL F+PQ+GHEQAG+RPA+ +SP +YN+KVGL++ CP+TS QK YP
Sbjct: 1   MVGKVYVPCRGDIVWLDFSPQSGHEQAGRRPAVCISPNAYNKKVGLAIFCPITSNQKGYP 60

Query: 61  FEVVIPQDLPIEGVILADQVKSLDWQSRQAAFICKVPQIILSDVVAKLDLLI 112
           FEV++P  LPI+GV+LAD +K+LDW+SR  ++IC + +   ++V+ K+  LI
Sbjct: 61  FEVLLPDKLPIKGVVLADHLKNLDWRSRNTSYICSLDESTFAEVLGKIHTLI 112


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.321    0.139    0.422 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 720,074,085
Number of extensions: 26837920
Number of successful extensions: 48542
Number of sequences better than 1.0e-05: 231
Number of HSP's gapped: 48486
Number of HSP's successfully gapped: 231
Length of query: 113
Length of database: 3,060,696,203
Length adjustment: 80
Effective length of query: 33
Effective length of database: 2,307,015,003
Effective search space: 76131495099
Effective search space used: 76131495099
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 125 (52.8 bits)