BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0178.0029.p (503 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C5DAV1.1 C5DAV1_9BACI Aminotransferase class V 570 e-160 A4INU9.1 A4INU9_GEOTN Aminotransferase, putative 567 e-159 B4BSH3.1 B4BSH3_9BACI Aminotransferase class V 567 e-159 C3IZK4.1 C3IZK4_9BACI Aminotransferase class V 565 e-159 B7Y6R8.1 B7Y6R8_9BACI Aminotransferase class V 565 e-159 >C5DAV1.1 C5DAV1_9BACI Aminotransferase class V Length = 499 Score = 570 bits (1469), Expect = e-160, Method: Compositional matrix adjust. Identities = 266/475 (56%), Positives = 342/475 (72%), Gaps = 2/475 (0%) Query: 15 SLLEHFAAFREHTIGGRHVISTPYGRQPLLYADWTASGRLYEPLERKIQESFGPYVSNPH 74 L +F FRE TIG STP+G+Q ++YADWTASGRLY P+ERKI E GP+V+N H Sbjct: 17 ELETYFQPFREATIGTNVTFSTPFGQQKMIYADWTASGRLYAPIERKITEELGPFVANTH 76 Query: 75 TESNTTGLTMTLAYNEARKIIRDHVNAGPDDALLFCGNGTTGAINKLQRLMGLKLPEWLQ 134 TESN T MTLAY A+++I+ HV+A D ++ G G T A+NKLQRL+GL++PE + Sbjct: 77 TESNVTSTKMTLAYQYAKELIKRHVHADEHDVIIMEGAGMTSAVNKLQRLLGLRVPEQWK 136 Query: 135 EDYLCVPEERPVIFVSHMEHHSNLLPWQEGIGDVVTVPAGADGTADLKELERLLMLYRNR 194 E+RPVIFV+HMEHHSNLL W E IG+VV + A+G DL+ ++LL Y +R Sbjct: 137 SHLKLPDEKRPVIFVTHMEHHSNLLSWAETIGEVVMIRPTANGDVDLEHFQQLLQTYAHR 196 Query: 195 RFKIGSFTACSNVTGIHTPYHRLAAAMHRHGGVCFVDFAACAPYVSINMHPADPLEKLDA 254 + KIG+FTACSNVTGI TPYH+LA +H+H G+CFVDFAA APYV INMHP DPLEKLD Sbjct: 197 QLKIGAFTACSNVTGIQTPYHQLAKMIHKHEGICFVDFAASAPYVPINMHPDDPLEKLDG 256 Query: 255 IFFSPHKFLGGPGTGGVLIFDSGLSRGQLPDEPGGGTVVWVDAWGGRRYIHSVEVREDSG 314 I+FSPHKFLGGPG+ GVLIFD+ L + ++PD PGGGTV+W D WG +YI +E RED G Sbjct: 257 IYFSPHKFLGGPGSAGVLIFDARLYQNRIPDHPGGGTVIWTDPWGNYKYIKDIETREDGG 316 Query: 315 TPGFLQAFRTALCLKLKEAMNGDGGFMLARDQQLCGRLLTGLHSIPGCTILAGEHTRRHG 374 TP LQ + AL +KLKE M + +L R+++L LL+ L IP IL G R G Sbjct: 317 TPPILQTIKAALAVKLKEKMGVER--ILKREKELTTLLLSHLKKIPRVHILEGHREDRLG 374 Query: 375 IVSFNLEDIHYNLVVRLLNDRFGIQARGGCSCAGPYGHHLLGLDRELSREFIQAIHAGDQ 434 IVSF +E +HYNLVV+LLNDRFGIQ RGGCSCAGPYGH+LLG+D+E S+ + + G+ Sbjct: 375 IVSFIIEGMHYNLVVKLLNDRFGIQVRGGCSCAGPYGHYLLGIDKEQSKNILMQVEQGNL 434 Query: 435 SLKPGWVRLSLHPIMTDDEVEFMIHAVHSIVRHISVWRQDYRYNRSTNSWVHPAD 489 +KPGWVR+S+HPIMT++++ +I A+ IVRH W+Q+Y Y+ + N + H D Sbjct: 435 LIKPGWVRISVHPIMTNEDIYHIIRAIRHIVRHEDKWKQEYIYDHTKNEFYHRHD 489 >A4INU9.1 A4INU9_GEOTN Aminotransferase, putative Length = 499 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 274/475 (57%), Positives = 334/475 (70%), Gaps = 2/475 (0%) Query: 15 SLLEHFAAFREHTIGGRHVISTPYGRQPLLYADWTASGRLYEPLERKIQESFGPYVSNPH 74 L HF FR+ TIG H STP+G Q L+YADWTASGRLY P+E K+ GP+V N H Sbjct: 17 ELETHFQPFRDGTIGRFHPFSTPFGEQRLIYADWTASGRLYRPIEEKMVHELGPFVGNTH 76 Query: 75 TESNTTGLTMTLAYNEARKIIRDHVNAGPDDALLFCGNGTTGAINKLQRLMGLKLPEWLQ 134 TESN TG MTLAY A++II+ HV+AG D L+ G G T A+NKLQRL+GL++PE + Sbjct: 77 TESNVTGTKMTLAYQYAKEIIKQHVHAGRGDVLIMQGAGMTSAVNKLQRLLGLRVPEQWK 136 Query: 135 EDYLCVPEERPVIFVSHMEHHSNLLPWQEGIGDVVTVPAGADGTADLKELERLLMLYRNR 194 +ERPV+FV+HMEHHSNLL W E I +VVTV A G DL L LL YR+R Sbjct: 137 SRLALTNDERPVVFVTHMEHHSNLLSWAETIAEVVTVRPTASGEVDLDHLRELLERYRHR 196 Query: 195 RFKIGSFTACSNVTGIHTPYHRLAAAMHRHGGVCFVDFAACAPYVSINMHPADPLEKLDA 254 KIG+FTACSNVTG+ TPYH LA MH +GG+CFVDFAA APYV I+MHP DP+EKLDA Sbjct: 197 PQKIGAFTACSNVTGLETPYHELAKLMHEYGGLCFVDFAASAPYVRIDMHPDDPMEKLDA 256 Query: 255 IFFSPHKFLGGPGTGGVLIFDSGLSRGQLPDEPGGGTVVWVDAWGGRRYIHSVEVREDSG 314 I+FSPHKFLGGPG+ GVL+FD L R PD PGGGTV W D WG Y+ ++E RED G Sbjct: 257 IYFSPHKFLGGPGSAGVLVFDGRLYRQHAPDHPGGGTVYWTDPWGHYEYVEAIEEREDGG 316 Query: 315 TPGFLQAFRTALCLKLKEAMNGDGGFMLARDQQLCGRLLTGLHSIPGCTILAGEHTRRHG 374 TP F Q + AL ++LKE MN M AR+++L LL L IPG +L G + R G Sbjct: 317 TPPFWQTIKAALAIQLKEQMN--IAKMRAREKELVSLLLPALQKIPGVHVLEGHRSDRLG 374 Query: 375 IVSFNLEDIHYNLVVRLLNDRFGIQARGGCSCAGPYGHHLLGLDRELSREFIQAIHAGDQ 434 IVSF +E +HYNLVV+LLNDRFGIQARGGCSCAGPYGH+LLG+D+E S ++ + +G+ Sbjct: 375 IVSFVIEGLHYNLVVKLLNDRFGIQARGGCSCAGPYGHYLLGIDKEQSAALLEEVKSGNA 434 Query: 435 SLKPGWVRLSLHPIMTDDEVEFMIHAVHSIVRHISVWRQDYRYNRSTNSWVHPAD 489 KPGWVRLSLHP MT++EV +IHAV I R W+ +Y Y+ + N +VH D Sbjct: 435 LAKPGWVRLSLHPTMTNEEVYTIIHAVRQIARDGCRWQDEYEYDEAKNEFVHRGD 489 >B4BSH3.1 B4BSH3_9BACI Aminotransferase class V Length = 499 Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust. Identities = 274/475 (57%), Positives = 334/475 (70%), Gaps = 2/475 (0%) Query: 15 SLLEHFAAFREHTIGGRHVISTPYGRQPLLYADWTASGRLYEPLERKIQESFGPYVSNPH 74 L HF FR+ TIG H STP+G Q L+YADWTASGRLY P+E K+ GP+V N H Sbjct: 17 ELETHFQPFRDGTIGRFHPFSTPFGEQRLIYADWTASGRLYRPIEEKMVHELGPFVGNTH 76 Query: 75 TESNTTGLTMTLAYNEARKIIRDHVNAGPDDALLFCGNGTTGAINKLQRLMGLKLPEWLQ 134 TESN TG MTLAY A++II+ HV+AG D L+ G G T A+NKLQRL+GL++PE + Sbjct: 77 TESNVTGTKMTLAYQYAKEIIKQHVHAGRGDVLIMQGAGMTSAVNKLQRLLGLRVPEQWK 136 Query: 135 EDYLCVPEERPVIFVSHMEHHSNLLPWQEGIGDVVTVPAGADGTADLKELERLLMLYRNR 194 +ERPV+FV+HMEHHSNLL W E I +VVTV A G DL L LL YR+R Sbjct: 137 SRLALTNDERPVVFVTHMEHHSNLLSWAETIAEVVTVRPTASGEVDLDHLRELLERYRHR 196 Query: 195 RFKIGSFTACSNVTGIHTPYHRLAAAMHRHGGVCFVDFAACAPYVSINMHPADPLEKLDA 254 KIG+FTACSNVTG+ TPYH LA MH +GG+CFVDFAA APYV I+MHP DP+EKLDA Sbjct: 197 PQKIGAFTACSNVTGLETPYHELAKLMHEYGGLCFVDFAASAPYVRIDMHPDDPMEKLDA 256 Query: 255 IFFSPHKFLGGPGTGGVLIFDSGLSRGQLPDEPGGGTVVWVDAWGGRRYIHSVEVREDSG 314 I+FSPHKFLGGPG+ GVL+FD L R PD PGGGTV W D WG Y+ ++E RED G Sbjct: 257 IYFSPHKFLGGPGSAGVLVFDGRLYRQHAPDHPGGGTVYWTDPWGHYEYVEAIEEREDGG 316 Query: 315 TPGFLQAFRTALCLKLKEAMNGDGGFMLARDQQLCGRLLTGLHSIPGCTILAGEHTRRHG 374 TP F Q + AL ++LKE MN M AR+++L LL L IPG +L G + R G Sbjct: 317 TPPFWQTIKAALAIQLKEQMN--IAKMRAREKELVSLLLPALQKIPGVHVLEGHRSDRLG 374 Query: 375 IVSFNLEDIHYNLVVRLLNDRFGIQARGGCSCAGPYGHHLLGLDRELSREFIQAIHAGDQ 434 IVSF +E +HYNLVV+LLNDRFGIQARGGCSCAGPYGH+LLG+D+E S ++ + +G+ Sbjct: 375 IVSFVIEGLHYNLVVKLLNDRFGIQARGGCSCAGPYGHYLLGIDKEQSAALLEEVKSGNA 434 Query: 435 SLKPGWVRLSLHPIMTDDEVEFMIHAVHSIVRHISVWRQDYRYNRSTNSWVHPAD 489 KPGWVRLSLHP MT++EV +IHAV I R W+ +Y Y+ + N +VH D Sbjct: 435 LAKPGWVRLSLHPTMTNEEVYTIIHAVRQIARDGCRWQDEYEYDEAKNEFVHRGD 489 >C3IZK4.1 C3IZK4_9BACI Aminotransferase class V Length = 499 Score = 565 bits (1455), Expect = e-159, Method: Compositional matrix adjust. Identities = 273/475 (57%), Positives = 335/475 (70%), Gaps = 2/475 (0%) Query: 15 SLLEHFAAFREHTIGGRHVISTPYGRQPLLYADWTASGRLYEPLERKIQESFGPYVSNPH 74 L +F FR+ TIG H STP+G+Q L+YADWTASGRLY P+E K+ GP+V N H Sbjct: 17 ELETYFQPFRDGTIGRFHPFSTPFGKQRLIYADWTASGRLYRPIEEKLTHELGPFVGNTH 76 Query: 75 TESNTTGLTMTLAYNEARKIIRDHVNAGPDDALLFCGNGTTGAINKLQRLMGLKLPEWLQ 134 TESN TG TLAY A++II+ HV+AG +D L+ G GTT A+NKLQRL+GL++PE + Sbjct: 77 TESNVTGTKTTLAYRYAKEIIKQHVHAGKNDVLIMQGAGTTSAVNKLQRLLGLRVPERWK 136 Query: 135 EDYLCVPEERPVIFVSHMEHHSNLLPWQEGIGDVVTVPAGADGTADLKELERLLMLYRNR 194 EERPV+FV+HMEHHSNLLPW E I +VV V +G DL L LL YR+R Sbjct: 137 HRLSLHDEERPVVFVTHMEHHSNLLPWVETIAEVVAVRPTENGDVDLDHLRELLERYRDR 196 Query: 195 RFKIGSFTACSNVTGIHTPYHRLAAAMHRHGGVCFVDFAACAPYVSINMHPADPLEKLDA 254 KIG+FTACSNVTG+ TPYH+LA MH HGG+CFVDFAA APYV I+MHP DP+E+LDA Sbjct: 197 PQKIGAFTACSNVTGLETPYHKLAKIMHEHGGLCFVDFAASAPYVRIDMHPDDPMEQLDA 256 Query: 255 IFFSPHKFLGGPGTGGVLIFDSGLSRGQLPDEPGGGTVVWVDAWGGRRYIHSVEVREDSG 314 I+FSPHKFLGGPG+ GVLIFDS L PD PGGGTV W D WG YI ++E RED G Sbjct: 257 IYFSPHKFLGGPGSAGVLIFDSRLYHQHAPDHPGGGTVYWTDPWGNYEYIQAIEEREDGG 316 Query: 315 TPGFLQAFRTALCLKLKEAMNGDGGFMLARDQQLCGRLLTGLHSIPGCTILAGEHTRRHG 374 TP F Q + AL ++LKE MN M AR+++L LL L S PG +L G R G Sbjct: 317 TPPFWQTIKAALAIQLKEQMNVKQ--MRAREKELVSLLLPALKSTPGVRVLEGHRDDRLG 374 Query: 375 IVSFNLEDIHYNLVVRLLNDRFGIQARGGCSCAGPYGHHLLGLDRELSREFIQAIHAGDQ 434 I+SF ++ +HYNLVV+LLNDRFGIQARGGCSCAGPYGH+LLG+D+E S +Q + G+ Sbjct: 375 IISFVIDGLHYNLVVKLLNDRFGIQARGGCSCAGPYGHYLLGIDKEQSAALLQEVKNGNP 434 Query: 435 SLKPGWVRLSLHPIMTDDEVEFMIHAVHSIVRHISVWRQDYRYNRSTNSWVHPAD 489 KPGWVRLSLHP MT++EV +I AV I R+ W+++Y Y+ N +VH D Sbjct: 435 LAKPGWVRLSLHPTMTNEEVYAIIRAVRQIARYGRRWQEEYEYDAGKNEFVHRDD 489 >B7Y6R8.1 B7Y6R8_9BACI Aminotransferase class V Length = 499 Score = 565 bits (1455), Expect = e-159, Method: Compositional matrix adjust. Identities = 273/475 (57%), Positives = 335/475 (70%), Gaps = 2/475 (0%) Query: 15 SLLEHFAAFREHTIGGRHVISTPYGRQPLLYADWTASGRLYEPLERKIQESFGPYVSNPH 74 L +F FR+ TIG H STP+G+Q L+YADWTASGRLY P+E K+ GP+V N H Sbjct: 17 ELETYFQPFRDGTIGRFHPFSTPFGKQRLIYADWTASGRLYRPIEEKLTHELGPFVGNTH 76 Query: 75 TESNTTGLTMTLAYNEARKIIRDHVNAGPDDALLFCGNGTTGAINKLQRLMGLKLPEWLQ 134 TESN TG TLAY A++II+ HV+AG +D L+ G GTT A+NKLQRL+GL++PE + Sbjct: 77 TESNVTGTKTTLAYRYAKEIIKQHVHAGKNDVLIMQGAGTTSAVNKLQRLLGLRVPERWK 136 Query: 135 EDYLCVPEERPVIFVSHMEHHSNLLPWQEGIGDVVTVPAGADGTADLKELERLLMLYRNR 194 EERPV+FV+HMEHHSNLLPW E I +VV V +G DL L LL YR+R Sbjct: 137 HRLSLHDEERPVVFVTHMEHHSNLLPWVETIAEVVAVRPTENGDVDLDHLRELLERYRDR 196 Query: 195 RFKIGSFTACSNVTGIHTPYHRLAAAMHRHGGVCFVDFAACAPYVSINMHPADPLEKLDA 254 KIG+FTACSNVTG+ TPYH+LA MH HGG+CFVDFAA APYV I+MHP DP+E+LDA Sbjct: 197 PQKIGAFTACSNVTGLETPYHKLAKIMHEHGGLCFVDFAASAPYVRIDMHPDDPMEQLDA 256 Query: 255 IFFSPHKFLGGPGTGGVLIFDSGLSRGQLPDEPGGGTVVWVDAWGGRRYIHSVEVREDSG 314 I+FSPHKFLGGPG+ GVLIFDS L PD PGGGTV W D WG YI ++E RED G Sbjct: 257 IYFSPHKFLGGPGSAGVLIFDSRLYHQHAPDHPGGGTVYWTDPWGNYEYIQAIEEREDGG 316 Query: 315 TPGFLQAFRTALCLKLKEAMNGDGGFMLARDQQLCGRLLTGLHSIPGCTILAGEHTRRHG 374 TP F Q + AL ++LKE MN M AR+++L LL L S PG +L G R G Sbjct: 317 TPPFWQTIKAALAIQLKEQMNVKQ--MRAREKELVSLLLPALKSTPGVRVLEGHRDDRLG 374 Query: 375 IVSFNLEDIHYNLVVRLLNDRFGIQARGGCSCAGPYGHHLLGLDRELSREFIQAIHAGDQ 434 I+SF ++ +HYNLVV+LLNDRFGIQARGGCSCAGPYGH+LLG+D+E S +Q + G+ Sbjct: 375 IISFVIDGLHYNLVVKLLNDRFGIQARGGCSCAGPYGHYLLGIDKEQSAALLQEVKNGNP 434 Query: 435 SLKPGWVRLSLHPIMTDDEVEFMIHAVHSIVRHISVWRQDYRYNRSTNSWVHPAD 489 KPGWVRLSLHP MT++EV +I AV I R+ W+++Y Y+ N +VH D Sbjct: 435 LAKPGWVRLSLHPTMTNEEVYAIIRAVRQIARYGRRWQEEYEYDAGKNEFVHRDD 489 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.322 0.139 0.441 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 3,374,488,111 Number of extensions: 154411433 Number of successful extensions: 282276 Number of sequences better than 1.0e-05: 1709 Number of HSP's gapped: 279326 Number of HSP's successfully gapped: 1741 Length of query: 503 Length of database: 3,060,696,203 Length adjustment: 140 Effective length of query: 363 Effective length of database: 1,741,754,103 Effective search space: 632256739389 Effective search space used: 632256739389 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.9 bits) S2: 133 (55.8 bits)