BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0178.0027.p (169 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZFX3.1 C0ZFX3_BREBN Putative uncharacterized protein 158 2e-37 Q7NHZ9.1 Q7NHZ9_GLOVI Glr2385 protein 153 5e-36 Q8ET96.1 Q8ET96_OCEIH Hypothetical conserved protein 147 3e-34 A8MFP8.1 A8MFP8_ALKOO GCN5-related N-acetyltransferase 135 2e-30 B7B246.1 B7B246_9FIRM Putative uncharacterized protein 119 1e-25 >C0ZFX3.1 C0ZFX3_BREBN Putative uncharacterized protein Length = 170 Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 77/157 (49%), Positives = 104/157 (66%), Gaps = 1/157 (0%) Query: 8 VDLRKTTIKDLEFVMHAEGSEPNRRFIGQWSIEQHTAALEDSDILHLIIREK-TGEPAGY 66 + LR+TT D+ FV E + N FI WS ++H AL D DILH+I +K TG P GY Sbjct: 3 IHLRRTTPADIPFVCEVENAPENTPFIIPWSEDRHHNALGDPDILHMIAEKKETGHPVGY 62 Query: 67 VILTGLLDPNLSICIKRIVVQSKGRGYGKSTLALLMHWVFTQTPAHRLWLDVKDYNTRAH 126 VI+ GL +P+ SI + RI + KG GYG++ L + HW F AHRLWLDVK+ N RA Sbjct: 63 VIIAGLTNPHQSIELIRITIAVKGEGYGRNILRQIKHWAFIGQKAHRLWLDVKETNDRAR 122 Query: 127 HVYVRAGFTAEGTLRDCIRTDDSFESLMIMSILRQEY 163 +Y+ GF EGTLRDC+++ D++ESL+I+S+L EY Sbjct: 123 SLYLSEGFHIEGTLRDCLKSGDTYESLIILSMLATEY 159 >Q7NHZ9.1 Q7NHZ9_GLOVI Glr2385 protein Length = 171 Score = 153 bits (386), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 75/156 (48%), Positives = 103/156 (66%), Gaps = 1/156 (0%) Query: 8 VDLRKTTIKDLEFVMHAEGSEPNRRFIGQWSIEQHTAALEDSDILHLIIREKTGEPAGYV 67 V LR T DL+FV+ E S NR +I QWS+++H A L D D HL+I E GE GYV Sbjct: 5 VSLRPTAEADLDFVLAQEQSPNNRPYIRQWSVDEHRARLLDPDWAHLVI-ESEGEAVGYV 63 Query: 68 ILTGLLDPNLSICIKRIVVQSKGRGYGKSTLALLMHWVFTQTPAHRLWLDVKDYNTRAHH 127 IL GL + + S+C+KRIVV KG G+G+ + + + F + +HRLWL+VKD+NT A H Sbjct: 64 ILHGLRNSDDSLCLKRIVVARKGEGFGRRAVQQVKRFAFDRVGSHRLWLEVKDFNTAARH 123 Query: 128 VYVRAGFTAEGTLRDCIRTDDSFESLMIMSILRQEY 163 +Y GF AEG +R+ R + ++SL++MSIL QEY Sbjct: 124 LYRSEGFVAEGIMRESARIGERYDSLIVMSILEQEY 159 >Q8ET96.1 Q8ET96_OCEIH Hypothetical conserved protein Length = 167 Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust. Identities = 73/167 (43%), Positives = 104/167 (62%), Gaps = 1/167 (0%) Query: 1 MLLQTEIVDLRKTTIKDLEFVMHAEGSEPNRRFIGQWSIEQHTAALEDSDILHLIIREK- 59 M Q+ + +R+ T D+ ++++ E SE N+ I W+ EQH L+D D +LII EK Sbjct: 1 MTFQSNQIYIREATNNDIGYMINVENSEENKPHILPWTEEQHRKTLQDEDSYYLIIVEKV 60 Query: 60 TGEPAGYVILTGLLDPNLSICIKRIVVQSKGRGYGKSTLALLMHWVFTQTPAHRLWLDVK 119 T G++IL GL + N I + RI ++ KG+G GK L L+ W F AHRLWLDVK Sbjct: 61 TNRNVGFIILRGLTNTNKGIELVRIAIEEKGKGIGKEALNLIKIWAFNSYKAHRLWLDVK 120 Query: 120 DYNTRAHHVYVRAGFTAEGTLRDCIRTDDSFESLMIMSILRQEYIKR 166 N RA +Y + GFT EGTLR+C+R +++ESL +MS+L+ EY R Sbjct: 121 TDNKRAITIYKKEGFTLEGTLRECLRVGNTYESLHVMSLLKHEYDNR 167 >A8MFP8.1 A8MFP8_ALKOO GCN5-related N-acetyltransferase Length = 174 Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust. Identities = 64/161 (39%), Positives = 98/161 (60%), Gaps = 1/161 (0%) Query: 4 QTEIVDLRKTTIKDLEFVMHAEGSEPNRRFIGQWSIEQHTAALEDSDILHLIIRE-KTGE 62 Q+ ++ LR TT DL+FV+ E N +++ QW+ EQH A+ED D+LHL+I + +T Sbjct: 7 QSNLIILRNTTEDDLDFVVQTERDLENAKYVLQWTKEQHRGAMEDEDMLHLVIEDSQTHN 66 Query: 63 PAGYVILTGLLDPNLSICIKRIVVQSKGRGYGKSTLALLMHWVFTQTPAHRLWLDVKDYN 122 GY I+ GL + + +I +KRI + K +GYG+ + + F HRLWLD N Sbjct: 67 LVGYAIIAGLKNYDRNIELKRIAISEKNKGYGREAIKQIRKISFEDLNGHRLWLDAICKN 126 Query: 123 TRAHHVYVRAGFTAEGTLRDCIRTDDSFESLMIMSILRQEY 163 +AH +Y GF EG LR+C+ + +ES+++MSIL +EY Sbjct: 127 HKAHRLYESEGFVQEGVLRECMFINGQYESIVVMSILEEEY 167 >B7B246.1 B7B246_9FIRM Putative uncharacterized protein Length = 188 Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 62/162 (38%), Positives = 93/162 (57%), Gaps = 2/162 (1%) Query: 8 VDLRKTTIKDLEFVMHAEGSEPNRRFIGQWSIEQHTAALEDSDI-LHLIIRE-KTGEPAG 65 + LRK T+ DL+F+M E N +FI + + HT +E+ + +I+ E +T EP G Sbjct: 21 LQLRKATMADLDFIMKLEYDPENLKFIVPFDRDVHTKIIEEGKASMDVIVEEIETKEPVG 80 Query: 66 YVILTGLLDPNLSICIKRIVVQSKGRGYGKSTLALLMHWVFTQTPAHRLWLDVKDYNTRA 125 Y+++ GL P + I++ KG GYG + LL W F HR WLD KDYN RA Sbjct: 81 YLLINGLTTPAKELEWTHIIIAKKGMGYGHEAMKLLKAWGFDDLKFHRAWLDCKDYNARA 140 Query: 126 HHVYVRAGFTAEGTLRDCIRTDDSFESLMIMSILRQEYIKRR 167 H+Y G EG +R+ I T+ +E+L+I+ IL +EY +R+ Sbjct: 141 LHLYESEGMQREGLIRETILTNGVYENLVILGILDREYQERK 182 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.324 0.138 0.415 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 991,411,685 Number of extensions: 39234944 Number of successful extensions: 115136 Number of sequences better than 1.0e-05: 297 Number of HSP's gapped: 115235 Number of HSP's successfully gapped: 297 Length of query: 169 Length of database: 3,060,696,203 Length adjustment: 125 Effective length of query: 44 Effective length of database: 1,883,069,328 Effective search space: 82855050432 Effective search space used: 82855050432 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 15 ( 7.0 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 40 (21.6 bits) S2: 126 (53.1 bits)