BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0175.0011.p (240 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B8DAZ8.1 B8DAZ8_LISMH Serine/threonine protein phosphatase famil... 201 3e-50 Q4EP27.1 Q4EP27_LISMO Serine/threonine protein phosphatase famil... 201 3e-50 Q4EFN0.1 Q4EFN0_LISMO Serine/threonine protein phosphatase famil... 201 4e-50 C1KZJ0.1 C1KZJ0_LISMC Putative uncharacterized protein 201 5e-50 Q71WD6.1 Q71WD6_LISMF Serine/threonine protein phosphatase famil... 201 6e-50 >B8DAZ8.1 B8DAZ8_LISMH Serine/threonine protein phosphatase family protein Length = 443 Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 139/209 (66%), Gaps = 10/209 (4%) Query: 29 QAEADTAPV------SFWVATDTHYLDKDLQDGGAAFQAYVNGGDGKILPYSEELMEALV 82 + E TAP+ S V TD HY L D G AF+ YV GDGK L YS+E+ +A + Sbjct: 26 KTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFL 85 Query: 83 YDVEQKKPKFLILSGDLTNNGETSSHKKLAEKLKRVEEAGTEVYVIPGNHDLNNPWARSF 142 DVE KK LI+SGDLTNNGE +SH++LA+KL +VE+ GT+V+V+PGNHD+NNPWAR F Sbjct: 86 ADVESKKTDVLIISGDLTNNGEKTSHEELAKKLTQVEKTGTQVFVVPGNHDINNPWARKF 145 Query: 143 KADKQIVAEHIAPEDFTEMYADFGYSEALSRDKVSLSYLVNAAPGLYLLMIDSSQYANNE 202 + DKQ+ + I+P DF+++Y+DFGY +A+S D+ SLSYL + ++LLM+D++ Y N Sbjct: 146 EKDKQLPTDTISPTDFSKIYSDFGYEDAISTDEFSLSYLAAPSSKVWLLMLDTAIYKTNM 205 Query: 203 SYGFPQTDGRXXXXSLLPFPGWMIAQSSL 231 G P T+G +L W+ S+L Sbjct: 206 QQGNPTTEGGLTAGTL----DWIKESSAL 230 >Q4EP27.1 Q4EP27_LISMO Serine/threonine protein phosphatase family protein Length = 443 Score = 201 bits (512), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 139/209 (66%), Gaps = 10/209 (4%) Query: 29 QAEADTAPV------SFWVATDTHYLDKDLQDGGAAFQAYVNGGDGKILPYSEELMEALV 82 + E TAP+ S V TD HY L D G AF+ YV GDGK L YS+E+ +A + Sbjct: 26 KTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFL 85 Query: 83 YDVEQKKPKFLILSGDLTNNGETSSHKKLAEKLKRVEEAGTEVYVIPGNHDLNNPWARSF 142 DVE KK LI+SGDLTNNGE +SH++LA+KL +VE+ GT+V+V+PGNHD+NNPWAR F Sbjct: 86 ADVESKKTDVLIISGDLTNNGEKTSHEELAKKLTQVEKTGTQVFVVPGNHDINNPWARKF 145 Query: 143 KADKQIVAEHIAPEDFTEMYADFGYSEALSRDKVSLSYLVNAAPGLYLLMIDSSQYANNE 202 + DKQ+ + I+P DF+++Y+DFGY +A+S D+ SLSYL + ++LLM+D++ Y N Sbjct: 146 EKDKQLPTDTISPTDFSKIYSDFGYEDAISTDEFSLSYLAAPSSKVWLLMLDTAIYKTNM 205 Query: 203 SYGFPQTDGRXXXXSLLPFPGWMIAQSSL 231 G P T+G +L W+ S+L Sbjct: 206 QQGNPTTEGGLTAGTL----DWIKESSAL 230 >Q4EFN0.1 Q4EFN0_LISMO Serine/threonine protein phosphatase family protein Length = 443 Score = 201 bits (511), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 138/209 (66%), Gaps = 10/209 (4%) Query: 29 QAEADTAPV------SFWVATDTHYLDKDLQDGGAAFQAYVNGGDGKILPYSEELMEALV 82 + E TAP+ S V TD HY L D G AF+ YV GDGK L YS+E+ +A + Sbjct: 26 KTENITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFL 85 Query: 83 YDVEQKKPKFLILSGDLTNNGETSSHKKLAEKLKRVEEAGTEVYVIPGNHDLNNPWARSF 142 DVE KK LI+SGDLTNNGE +SH++LA+KL +VE+ GT+V+V+PGNHD+NNPWAR F Sbjct: 86 ADVEAKKTDVLIISGDLTNNGEKTSHEELAKKLTQVEKTGTQVFVVPGNHDINNPWARKF 145 Query: 143 KADKQIVAEHIAPEDFTEMYADFGYSEALSRDKVSLSYLVNAAPGLYLLMIDSSQYANNE 202 + DKQ+ + I+P DF+++Y DFGY +A+S D+ SLSYL + ++LLM+D++ Y N Sbjct: 146 EKDKQLPTDTISPTDFSKIYGDFGYKDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNM 205 Query: 203 SYGFPQTDGRXXXXSLLPFPGWMIAQSSL 231 G P T+G +L W+ S+L Sbjct: 206 QQGTPTTEGGLTAGTL----DWIKESSAL 230 >C1KZJ0.1 C1KZJ0_LISMC Putative uncharacterized protein Length = 443 Score = 201 bits (511), Expect = 5e-50, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 138/209 (66%), Gaps = 10/209 (4%) Query: 29 QAEADTAPV------SFWVATDTHYLDKDLQDGGAAFQAYVNGGDGKILPYSEELMEALV 82 + E TAP+ S V TD HY L D G AF+ YV GDGK L YS+E+ +A + Sbjct: 26 KTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFL 85 Query: 83 YDVEQKKPKFLILSGDLTNNGETSSHKKLAEKLKRVEEAGTEVYVIPGNHDLNNPWARSF 142 DVE KK LI+SGDLTNNGE +SH++LA+KL +VE+ GT+V+V+PGNHD+NNPWAR F Sbjct: 86 ADVEAKKTDVLIISGDLTNNGEKTSHEELAKKLTQVEKTGTQVFVVPGNHDINNPWARKF 145 Query: 143 KADKQIVAEHIAPEDFTEMYADFGYSEALSRDKVSLSYLVNAAPGLYLLMIDSSQYANNE 202 + DKQ+ + I+P DF+++Y DFGY +A+S D+ SLSYL + ++LLM+D++ Y N Sbjct: 146 EKDKQLPTDTISPTDFSKIYGDFGYKDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNM 205 Query: 203 SYGFPQTDGRXXXXSLLPFPGWMIAQSSL 231 G P T+G +L W+ S+L Sbjct: 206 QQGNPTTEGGLTAGTL----DWIKESSAL 230 >Q71WD6.1 Q71WD6_LISMF Serine/threonine protein phosphatase family protein Length = 443 Score = 201 bits (510), Expect = 6e-50, Method: Compositional matrix adjust. Identities = 100/209 (47%), Positives = 138/209 (66%), Gaps = 10/209 (4%) Query: 29 QAEADTAPV------SFWVATDTHYLDKDLQDGGAAFQAYVNGGDGKILPYSEELMEALV 82 + E TAP+ S V TD HY L D G AF+ YV GDGK L YS+E+ +A + Sbjct: 26 KTENITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFL 85 Query: 83 YDVEQKKPKFLILSGDLTNNGETSSHKKLAEKLKRVEEAGTEVYVIPGNHDLNNPWARSF 142 DVE KK LI+SGDLTNNGE +SH++LA+KL +VE+ GT+V+V+PGNHD+NNPWAR F Sbjct: 86 ADVEAKKTDVLIISGDLTNNGEKTSHEELAKKLTQVEKTGTQVFVVPGNHDINNPWARKF 145 Query: 143 KADKQIVAEHIAPEDFTEMYADFGYSEALSRDKVSLSYLVNAAPGLYLLMIDSSQYANNE 202 + DKQ+ + I+P DF+++Y DFGY +A+S D+ SLSYL + ++LLM+D++ Y N Sbjct: 146 EKDKQLPTDTISPTDFSKIYGDFGYKDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNM 205 Query: 203 SYGFPQTDGRXXXXSLLPFPGWMIAQSSL 231 G P T+G +L W+ S+L Sbjct: 206 QQGNPTTEGGLTAGTL----DWIKESSAL 230 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.314 0.133 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,509,284,772 Number of extensions: 63566794 Number of successful extensions: 118466 Number of sequences better than 1.0e-05: 65 Number of HSP's gapped: 118510 Number of HSP's successfully gapped: 65 Length of query: 240 Length of database: 3,060,696,203 Length adjustment: 132 Effective length of query: 108 Effective length of database: 1,817,122,223 Effective search space: 196249200084 Effective search space used: 196249200084 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 129 (54.3 bits)