BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0175.0009.p
         (64 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B1DGE0.1 B1DGE0_9BACL Putative uncharacterized protein                119   8e-26
B7K8X5.1 B7K8X5_CYAP7 Putative uncharacterized protein                 89   2e-16
Q03HR8.1 Q03HR8_PEDPA Putative uncharacterized protein                 87   5e-16
A7Z1J2.1 A7Z1J2_BACA2 YdaT                                             87   7e-16
P96595.1 YDAT_BACSU Uncharacterized protein ydaT                       86   7e-16

>B1DGE0.1 B1DGE0_9BACL Putative uncharacterized protein
          Length = 64

 Score =  119 bits (299), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 56/64 (87%), Positives = 60/64 (93%)

Query: 1  MPWNKDDYPDSLKNFMAPVRNKAIEIANALLDEGYEEGRAISIATAQAKEWGENHDKQIR 60
          MPWNKDDYPDSLKNFMAPVRNKAI+IAN LL +GY EGRAISIATA+AKEWGE+HDKQIR
Sbjct: 1  MPWNKDDYPDSLKNFMAPVRNKAIDIANELLKDGYSEGRAISIATAKAKEWGEHHDKQIR 60

Query: 61 KKNH 64
          KK H
Sbjct: 61 KKGH 64


>B7K8X5.1 B7K8X5_CYAP7 Putative uncharacterized protein
          Length = 65

 Score = 88.6 bits (218), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/64 (68%), Positives = 55/64 (85%), Gaps = 1/64 (1%)

Query: 1  MPWNKDDYPDSLKNFMAPVRNKAIEIANALL-DEGYEEGRAISIATAQAKEWGENHDKQI 59
          MPW++++YP SLKNF   VRNKAIEIANALL +E YEEGRAI+IATA+A+EW EN DK I
Sbjct: 1  MPWDENNYPQSLKNFSPEVRNKAIEIANALLEEEHYEEGRAIAIATAKAEEWAENRDKPI 60

Query: 60 RKKN 63
          ++K+
Sbjct: 61 KQKD 64


>Q03HR8.1 Q03HR8_PEDPA Putative uncharacterized protein
          Length = 57

 Score = 87.0 bits (214), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 40/57 (70%), Positives = 46/57 (80%)

Query: 1  MPWNKDDYPDSLKNFMAPVRNKAIEIANALLDEGYEEGRAISIATAQAKEWGENHDK 57
          MPW K DYP+S+KN    VRNKAIEIANALLDEGY+E RAI I  +QA++W ENHDK
Sbjct: 1  MPWTKKDYPESMKNLSETVRNKAIEIANALLDEGYDEDRAIPIGISQAEKWAENHDK 57


>A7Z1J2.1 A7Z1J2_BACA2 YdaT
          Length = 74

 Score = 86.7 bits (213), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 40/58 (68%), Positives = 47/58 (81%)

Query: 1  MPWNKDDYPDSLKNFMAPVRNKAIEIANALLDEGYEEGRAISIATAQAKEWGENHDKQ 58
          MPW+  DYP SLKN   PV+ KAIEIANA++DEGYEEGRAI IAT+QAKEW +N  K+
Sbjct: 1  MPWSMKDYPQSLKNLEEPVKKKAIEIANAMVDEGYEEGRAIPIATSQAKEWKKNASKE 58


>P96595.1 YDAT_BACSU Uncharacterized protein ydaT
          Length = 150

 Score = 86.3 bits (212), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 39/54 (72%), Positives = 45/54 (83%)

Query: 1  MPWNKDDYPDSLKNFMAPVRNKAIEIANALLDEGYEEGRAISIATAQAKEWGEN 54
          MPW+  DYP SLKN   PVR KAI+IANA++DEGYEEGRAI IAT++AKEW EN
Sbjct: 1  MPWSMKDYPASLKNLEKPVRKKAIDIANAMIDEGYEEGRAIPIATSKAKEWAEN 54


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.311    0.129    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 387,072,806
Number of extensions: 10849838
Number of successful extensions: 27209
Number of sequences better than 1.0e-05: 47
Number of HSP's gapped: 27209
Number of HSP's successfully gapped: 47
Length of query: 64
Length of database: 3,060,696,203
Length adjustment: 36
Effective length of query: 28
Effective length of database: 2,721,539,663
Effective search space: 76203110564
Effective search space used: 76203110564
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 126 (53.1 bits)