BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0175.0007.p
         (111 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

B3KGQ1.1 B3KGQ1_9BACI Putative uncharacterized protein                138   2e-31
B1D6A1.1 B1D6A1_9BACL Putative uncharacterized protein                122   1e-26

>B3KGQ1.1 B3KGQ1_9BACI Putative uncharacterized protein
          Length = 114

 Score =  138 bits (347), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 63/106 (59%), Positives = 81/106 (76%)

Query: 1   MSSLLEARNVYEDFEVETDILFFKVGDHDLVIFHGRNYNIKKRMTAEQLNRLVSNPSYYH 60
           M  + E+RN+YEDF VETDILFFK G H LV FHGRNYNIKKRMTAE++  L+S   +YH
Sbjct: 2   MKHVSESRNMYEDFVVETDILFFKTGSHGLVSFHGRNYNIKKRMTAEKIASLLSGKQFYH 61

Query: 61  VYGGCYVNLNKISSIEDDSIYFGEMGLFAKTVRVPRRKQESIRHLL 106
           V G CYVN++KI+++E   +YFGE    AK +R+PR KQES++ L+
Sbjct: 62  VGGNCYVNVDKITTVEQGIVYFGEKAPSAKHLRIPRWKQESLKRLV 107


>B1D6A1.1 B1D6A1_9BACL Putative uncharacterized protein
          Length = 120

 Score =  122 bits (305), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 58/106 (54%), Positives = 74/106 (69%)

Query: 1   MSSLLEARNVYEDFEVETDILFFKVGDHDLVIFHGRNYNIKKRMTAEQLNRLVSNPSYYH 60
           M++ L  RNVYEDFE+E+D+L+FK+G   LV FHGRNYNIKKRMTAEQ+ +L +N S+Y 
Sbjct: 2   MNTTLSGRNVYEDFELESDVLYFKLGTLGLVSFHGRNYNIKKRMTAEQIQQLTANSSFYP 61

Query: 61  VYGGCYVNLNKISSIEDDSIYFGEMGLFAKTVRVPRRKQESIRHLL 106
           V   CY+N+ KI SI    +YFG      K V VPRRKQ  ++ L 
Sbjct: 62  VNTNCYINIGKIKSIAGGVVYFGSEYHETKQVPVPRRKQYVLQQLF 107


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.322    0.138    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 608,119,892
Number of extensions: 21591638
Number of successful extensions: 50936
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 50936
Number of HSP's successfully gapped: 2
Length of query: 111
Length of database: 3,060,696,203
Length adjustment: 78
Effective length of query: 33
Effective length of database: 2,325,857,033
Effective search space: 76753282089
Effective search space used: 76753282089
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 126 (53.1 bits)