BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0175.0004.p
         (208 letters)

Database: pfamseq 
           9,421,015 sequences; 3,060,696,203 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Q06074.1 Q06074_BACME ORF2 protein                                    143   7e-33
B3KGP4.1 B3KGP4_9BACI Phosphoesterase PA-phosphatase related          128   3e-28
B1D5A6.1 B1D5A6_9BACL Phosphoesterase PA-phosphatase related          110   9e-23
A9VU35.1 A9VU35_BACWK Phosphoesterase PA-phosphatase related           90   1e-16
Q81QV6.1 Q81QV6_BACAN PAP2 family protein                              89   3e-16

>Q06074.1 Q06074_BACME ORF2 protein
          Length = 216

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 74/132 (56%), Positives = 95/132 (71%)

Query: 42  FDNFMIHTVQSAESPGLTSLAKGLSLIGSSKLAIGISLLAMVLLYFVLKHRIELILFLAV 101
           FD  +I  VQ  ESP LT + K  + IGS+   I +SL+ +  LY +LKHR+EL+LF AV
Sbjct: 36  FDEDVISLVQGWESPLLTDIMKFFTYIGSTASLIILSLVILFFLYRILKHRLELVLFTAV 95

Query: 102 GAGSQLLNTWMKLWFHRERPNIHRLIEQAGYSFPSGHSMAAFSLYGIIAYLLWRHMRRRS 161
             GS LLN  +KL+F R RP++HRLI+  GYSFPSGH+M AFSLYGI+ +LLWRH+  R 
Sbjct: 96  MVGSPLLNLMVKLFFQRARPDLHRLIDIGGYSFPSGHAMNAFSLYGILTFLLWRHITARW 155

Query: 162 ERILFILFTVLM 173
            RIL ILF++LM
Sbjct: 156 ARILLILFSMLM 167


>B3KGP4.1 B3KGP4_9BACI Phosphoesterase PA-phosphatase related
          Length = 228

 Score =  128 bits (322), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 93/139 (66%)

Query: 35  KMDRISGFDNFMIHTVQSAESPGLTSLAKGLSLIGSSKLAIGISLLAMVLLYFVLKHRIE 94
           K + ++  D  +I TVQ+ E P LT +A GLS IGS    I +SL+ + +LY++L HR E
Sbjct: 35  KRESLAALDLAIITTVQALEHPLLTDIAIGLSFIGSIGPVIVLSLIVIAVLYWILGHRKE 94

Query: 95  LILFLAVGAGSQLLNTWMKLWFHRERPNIHRLIEQAGYSFPSGHSMAAFSLYGIIAYLLW 154
           ++L + V  GS +LN  +K  F R RP+I+RLIE  GYS+PSGHSM AFS Y ++AYLLW
Sbjct: 95  ILLLIVVVFGSSILNLLLKWVFQRARPDINRLIEITGYSYPSGHSMGAFSFYSVLAYLLW 154

Query: 155 RHMRRRSERILFILFTVLM 173
           RH+  R+ R   I  +++M
Sbjct: 155 RHIDSRAGRGTLIAVSIVM 173


>B1D5A6.1 B1D5A6_9BACL Phosphoesterase PA-phosphatase related
          Length = 235

 Score =  110 bits (274), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 57/139 (41%), Positives = 88/139 (63%), Gaps = 1/139 (0%)

Query: 37  DRISGFDNFMIHTVQSAESPGLTSLAKGLSLIGSSKLAIGISLLAMVLLYFVLKHRIELI 96
            RI+ FDN +   ++S  S  +T + +  + +GS  L + I ++A   L+  + +R ELI
Sbjct: 37  KRIAAFDNKITDAIRSVRSDAMTVIMRVFTELGSEFLVVLI-VIAFSSLFAFIGYRRELI 95

Query: 97  LFLAVGAGSQLLNTWMKLWFHRERPNIHRLIEQAGYSFPSGHSMAAFSLYGIIAYLLWRH 156
            +L V   S LLN  +K +FHR RP+I+R+IE +G+SFPSGHSM+AF+LYGI  Y LW+H
Sbjct: 96  FYLGVIGSSALLNLVLKTFFHRARPDINRIIEASGFSFPSGHSMSAFTLYGISIYFLWKH 155

Query: 157 MRRRSERILFILFTVLMTG 175
           ++ R  R   IL  +++  
Sbjct: 156 LKYRWMRAAVILIGIVIIA 174


>A9VU35.1 A9VU35_BACWK Phosphoesterase PA-phosphatase related
          Length = 213

 Score = 90.1 bits (222), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 78/132 (59%), Gaps = 3/132 (2%)

Query: 39  ISGFDNFMIHTVQSAESPGLTSLAKGLSLIGSSKLAIGISLLAMVLLYFVLKHRIELILF 98
           I  FDN + H +QS  +  LT+    +S IGS +  I   LL ++++YF+L+ +I   L 
Sbjct: 32  IEKFDNVVAHFIQSFRNEYLTTYFTWVSFIGSKR--IYFPLLIILVMYFLLRKKILSALL 89

Query: 99  LAVGA-GSQLLNTWMKLWFHRERPNIHRLIEQAGYSFPSGHSMAAFSLYGIIAYLLWRHM 157
           L +   GS+ LN+ +KLW+ R RP++ +L+   GYSFPSGH+M A +  G IAY+     
Sbjct: 90  LTINYYGSRYLNSMLKLWYERARPDVTQLVTATGYSFPSGHTMNATAFLGFIAYVTITED 149

Query: 158 RRRSERILFILF 169
           R    + L I+F
Sbjct: 150 RISLHKKLLIIF 161


>Q81QV6.1 Q81QV6_BACAN PAP2 family protein
          Length = 213

 Score = 89.0 bits (219), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/132 (37%), Positives = 78/132 (59%), Gaps = 3/132 (2%)

Query: 39  ISGFDNFMIHTVQSAESPGLTSLAKGLSLIGSSKLAIGISLLAMVLLYFVLKHRIELILF 98
           I  FDN + H +QS  +  LT+    +S IGS +  I   LL ++++YF+++ ++   L 
Sbjct: 32  IEKFDNIVAHFIQSFRNDYLTTYFTWMSFIGSKR--IYFPLLIILVMYFLVRKKLLSALL 89

Query: 99  LAVGA-GSQLLNTWMKLWFHRERPNIHRLIEQAGYSFPSGHSMAAFSLYGIIAYLLWRHM 157
           L +   GS+ LN+ +KLW+ R RP++ +L+   GYSFPSGH+M A +  G IAY+     
Sbjct: 90  LTINYYGSRYLNSMLKLWYERARPDVTQLVTATGYSFPSGHTMNATAFLGFIAYVTITEE 149

Query: 158 RRRSERILFILF 169
           R    + L I+F
Sbjct: 150 RITLHKKLLIIF 161


  Database: pfamseq
    Posted date:  Aug 5, 2010  3:22 PM
  Number of letters in database: 3,060,696,203
  Number of sequences in database:  9,421,015
  
Lambda     K      H
   0.327    0.141    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 9421015
Number of Hits to DB: 1,120,235,432
Number of extensions: 39057311
Number of successful extensions: 133113
Number of sequences better than 1.0e-05: 279
Number of HSP's gapped: 133126
Number of HSP's successfully gapped: 279
Length of query: 208
Length of database: 3,060,696,203
Length adjustment: 130
Effective length of query: 78
Effective length of database: 1,835,964,253
Effective search space: 143205211734
Effective search space used: 143205211734
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 128 (53.9 bits)