BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0172.0011.p (383 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KG55.1 B3KG55_9BACI Aminotransferase class V 444 e-123 B1DBU9.1 B1DBU9_9BACL Aminotransferase class V 384 e-105 C3IXL3.1 C3IXL3_9BACI Aminotransferase class V 327 1e-87 B7YAM0.1 B7YAM0_9BACI Aminotransferase class V 327 1e-87 Q5KW55.1 Q5KW55_GEOKA Cysteine desulfurase EC=4.4.1.- 324 9e-87 >B3KG55.1 B3KG55_9BACI Aminotransferase class V Length = 420 Score = 444 bits (1143), Expect = e-123, Method: Compositional matrix adjust. Identities = 217/376 (57%), Positives = 271/376 (72%) Query: 1 MLYWXXXXXXXXXXEVVQTVEQIMRLHYANPSSLHRAGMEAERLITRAREVCAAALAVQP 60 ++YW EVV T+ ++M+LHYANPS+LHR+G A +L RAREVCAAAL V+P Sbjct: 35 LIYWDHAATTPPFDEVVDTMAEVMKLHYANPSALHRSGEAAAKLQKRAREVCAAALDVKP 94 Query: 61 HEILFTSGATESNNLAIKGAALQYQGRGRHIVTTQLEHPSVYESCRQLQELGWEVSFVAP 120 EI+FTSGATE NN+AIKGAA+QY RG+HI+TT EHPSVYE CRQL+ LGWEV+++ Sbjct: 95 DEIVFTSGATEGNNMAIKGAAMQYSSRGKHIITTGTEHPSVYECCRQLETLGWEVTYLPV 154 Query: 121 TGTGIVXXXXXXXXXXXXTVLVSVMHVNNEIGTVQPLREIGQGIKAVNRRTLFHVDGVQG 180 G+V TVLVS+MHVNNE G VQPL E+G+ +K N RTL HVDGVQG Sbjct: 155 DAEGMVDLAALSQAVRKDTVLVSIMHVNNETGAVQPLAEVGRIVKERNPRTLLHVDGVQG 214 Query: 181 YGKLETRLKEWQAELYSLSPHKIRGPRGTGILVVREGTALFPLLTGGSHENGNRAGTENV 240 +GKL L WQA+LYSLS HK GPRG G+L +R+G LFPL++GGS E+G+RAGTENV Sbjct: 215 FGKLPVSLSGWQADLYSLSAHKFNGPRGMGVLYIRQGVQLFPLISGGSQESGHRAGTENV 274 Query: 241 AGIVASAKAVRMSGERREELVRRLIPLRNRLLHFIAAMPELVLNSREDGAPHIVHFSYPG 300 AG VA +KA+R+S E + EL R+ +R L I +P LVLNS E APHI+HFSYPG Sbjct: 275 AGAVAMSKAMRLSRENQPELYARMTEIRELLFQGIRKIPGLVLNSSEQSAPHIIHFSYPG 334 Query: 301 MKGEVLARKLEELGMTVSTRSACSSRLAEPSRILLSMGRDVPAALGGIRISLGDIHTEAD 360 +K EV+ LEE+GM VST+SACSS+L+EPSR+LL+MG+D+ AA GIRISLG H D Sbjct: 335 LKPEVMVHALEEMGMLVSTKSACSSKLSEPSRVLLAMGKDMEAASSGIRISLGKEHQLGD 394 Query: 361 VALLEQALLTAVLSLK 376 VA L + L +L+ Sbjct: 395 VARLVEVLAKVCGNLR 410 >B1DBU9.1 B1DBU9_9BACL Aminotransferase class V Length = 385 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 196/382 (51%), Positives = 257/382 (67%), Gaps = 4/382 (1%) Query: 1 MLYWXXXXXXXXXXEVVQTVEQIMRLHYANPSSLHRAGMEAERLITRAREVCAAALAVQP 60 MLY+ EVV T ++M+ HYANPSS+HRAG+EA++LI R+R V A V+P Sbjct: 1 MLYFDHCASTPPYAEVVDTFAEVMKAHYANPSSIHRAGVEADKLIVRSRSVLAEQFGVKP 60 Query: 61 HEILFTSGATESNNLAIKGAALQYQGRGRHIVTTQLEHPSVYESCRQLQELGWEVSFVAP 120 E LFTSG TESNNLA+KGAA Q++ RG H++TTQ+EH SV ++ RQL++ G+ V+++ Sbjct: 61 EEWLFTSGGTESNNLAVKGAARQFRSRGNHLITTQIEHSSVNDAFRQLEQEGFRVTYLPV 120 Query: 121 TGTGIVXXXXXXXXXXXXTVLVSVMHVNNEIGTVQPLREIGQGIKAVNRRTLFHVDGVQG 180 + TG V T+L+S+MHVNNE+G++QP+ +IGQ + R LFHVD VQ Sbjct: 121 SPTGHVDLKLLQASITDETILISIMHVNNEVGSIQPIEKIGQLLSEYP-RILFHVDAVQS 179 Query: 181 YGKLETRLKEWQAELYSLSPHKIRGPRGTGILVVREGTALFPLLTGGSHENGNRAGTENV 240 GKL +LK+W+ +L S S HK+RGP+G G L VREG PL +GGS E G RAGT+NV Sbjct: 180 IGKLPVKLKKWRIDLLSGSAHKLRGPKGVGYLYVREGLQFQPLQSGGSQERGMRAGTQNV 239 Query: 241 AGIVASAKAVRMSGERREELVRRLIPLRNRLLHFIAAMPELVLNSREDG---APHIVHFS 297 GIVASAKA+RMS + E+ R+ LR RL+ +A +P+L+LN ED APHIVHFS Sbjct: 240 PGIVASAKALRMSMQAEEKNRYRMYALRERLIRQLAKIPQLMLNGSEDAAVMAPHIVHFS 299 Query: 298 YPGMKGEVLARKLEELGMTVSTRSACSSRLAEPSRILLSMGRDVPAALGGIRISLGDIHT 357 YPGMK EV+ +EE G +ST+SACSS+ +PS++LL+MG A GGIRIS GD HT Sbjct: 300 YPGMKPEVIVHMMEEQGAIISTKSACSSKDNKPSKVLLAMGSTPERAAGGIRISFGDEHT 359 Query: 358 EADVALLEQALLTAVLSLKKAE 379 E D+ L L V LK E Sbjct: 360 EQDIDKLVDMLSRTVAQLKPLE 381 >C3IXL3.1 C3IXL3_9BACI Aminotransferase class V Length = 381 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 182/379 (48%), Positives = 246/379 (64%), Gaps = 3/379 (0%) Query: 1 MLYWXXXXXXXXXXEVVQTVEQIMRLHYANPSSLHRAGMEAERLITRAREVCAAALAVQP 60 M+Y EVV + + ++ANPSSLH GM+AERL+ +ARE AA L V+P Sbjct: 1 MIYLDNSATTKPFPEVVDSFVAVATNYFANPSSLHGLGMKAERLLAQAREQIAAMLRVKP 60 Query: 61 HEILFTSGATESNNLAIKGAALQYQGRGRHIVTTQLEHPSVYESCRQLQELGWEVSFVAP 120 +EI+FTSG TE+NN AIKG A QYQ RGRHI+TT++EHPSV E CRQL+ELG+EV+++ Sbjct: 61 NEIVFTSGGTEANNFAIKGVAWQYQRRGRHIITTKIEHPSVAEPCRQLEELGFEVTYLPV 120 Query: 121 TGTGIVXXXXXXXXXXXXTVLVSVMHVNNEIGTVQPLREIGQGIKAVNRRTLFHVDGVQG 180 G V T+LVSVMHVNNE+GTVQP+ EIG + + +TLFHVD VQG Sbjct: 121 DREGRVSVEQVERALRDDTILVSVMHVNNEVGTVQPIEEIG-ALLSRYPKTLFHVDRVQG 179 Query: 181 YGKLETRLKEWQAELYSLSPHKIRGPRGTGILVVREGTALFPLLTGGSHENGNRAGTENV 240 K+ LK+ +L ++S HK G RG G+L VREG L PL+ GG E R+GTENV Sbjct: 180 ISKVPLDLKQAGVDLCTISAHKFHGLRGAGLLYVREGVRLAPLIAGGGQERQLRSGTENV 239 Query: 241 AGIVASAKAVRMSGERREELVRRLIPLRNRLLHFIAAMPELVLNSREDG-APHIVHFSYP 299 A IVA AKA+R++ ER E + RL L++ L ++A+P++ +N+ DG APHI++FS Sbjct: 240 AAIVAMAKALRLAMERYERDIGRLQALKDEWLEALSAIPDIEINTPRDGAAPHIINFSLK 299 Query: 300 -GMKGEVLARKLEELGMTVSTRSACSSRLAEPSRILLSMGRDVPAALGGIRISLGDIHTE 358 G+K EV +LE+ G+ VST SACSS+ PS+ LL+MG A GIRISL ++ Sbjct: 300 SGIKPEVFVHELEKSGIYVSTTSACSSKKKAPSKTLLAMGLGEDRAERGIRISLSFDNSR 359 Query: 359 ADVALLEQALLTAVLSLKK 377 ++A A+ A+ +L + Sbjct: 360 EEIAPAVAAIKQAIKTLSE 378 >B7YAM0.1 B7YAM0_9BACI Aminotransferase class V Length = 381 Score = 327 bits (837), Expect = 1e-87, Method: Compositional matrix adjust. Identities = 182/379 (48%), Positives = 246/379 (64%), Gaps = 3/379 (0%) Query: 1 MLYWXXXXXXXXXXEVVQTVEQIMRLHYANPSSLHRAGMEAERLITRAREVCAAALAVQP 60 M+Y EVV + + ++ANPSSLH GM+AERL+ +ARE AA L V+P Sbjct: 1 MIYLDNSATTKPFPEVVDSFVAVATNYFANPSSLHGLGMKAERLLAQAREQIAAMLRVKP 60 Query: 61 HEILFTSGATESNNLAIKGAALQYQGRGRHIVTTQLEHPSVYESCRQLQELGWEVSFVAP 120 +EI+FTSG TE+NN AIKG A QYQ RGRHI+TT++EHPSV E CRQL+ELG+EV+++ Sbjct: 61 NEIVFTSGGTEANNFAIKGVAWQYQRRGRHIITTKIEHPSVAEPCRQLEELGFEVTYLPV 120 Query: 121 TGTGIVXXXXXXXXXXXXTVLVSVMHVNNEIGTVQPLREIGQGIKAVNRRTLFHVDGVQG 180 G V T+LVSVMHVNNE+GTVQP+ EIG + + +TLFHVD VQG Sbjct: 121 DREGRVSVEQVERALRDDTILVSVMHVNNEVGTVQPIEEIG-ALLSRYPKTLFHVDRVQG 179 Query: 181 YGKLETRLKEWQAELYSLSPHKIRGPRGTGILVVREGTALFPLLTGGSHENGNRAGTENV 240 K+ LK+ +L ++S HK G RG G+L VREG L PL+ GG E R+GTENV Sbjct: 180 ISKVPLDLKQAGVDLCTISAHKFHGLRGAGLLYVREGVRLAPLIAGGGQERQLRSGTENV 239 Query: 241 AGIVASAKAVRMSGERREELVRRLIPLRNRLLHFIAAMPELVLNSREDG-APHIVHFSYP 299 A IVA AKA+R++ ER E + RL L++ L ++A+P++ +N+ DG APHI++FS Sbjct: 240 AAIVAMAKALRLAMERYERDIGRLQALKDEWLEALSAIPDIEINTPRDGAAPHIINFSLK 299 Query: 300 -GMKGEVLARKLEELGMTVSTRSACSSRLAEPSRILLSMGRDVPAALGGIRISLGDIHTE 358 G+K EV +LE+ G+ VST SACSS+ PS+ LL+MG A GIRISL ++ Sbjct: 300 SGIKPEVFVHELEKSGIYVSTTSACSSKKKAPSKTLLAMGLGEDRAERGIRISLSFDNSR 359 Query: 359 ADVALLEQALLTAVLSLKK 377 ++A A+ A+ +L + Sbjct: 360 EEIAPAVAAIKQAIKTLSE 378 >Q5KW55.1 Q5KW55_GEOKA Cysteine desulfurase EC=4.4.1.- Length = 381 Score = 324 bits (831), Expect = 9e-87, Method: Compositional matrix adjust. Identities = 181/379 (47%), Positives = 245/379 (64%), Gaps = 3/379 (0%) Query: 1 MLYWXXXXXXXXXXEVVQTVEQIMRLHYANPSSLHRAGMEAERLITRAREVCAAALAVQP 60 M+Y EV+ + + ++ANPSSLH GM+AERL+ +ARE AA L V+P Sbjct: 1 MIYLDNSATTKPFPEVIDSFVAVATNYFANPSSLHGLGMKAERLLAQAREQIAAMLRVKP 60 Query: 61 HEILFTSGATESNNLAIKGAALQYQGRGRHIVTTQLEHPSVYESCRQLQELGWEVSFVAP 120 +EI+FTSG TE+NN AIKG A QYQ RGRHI+TT++EHPSV E CRQL+ELG+EV+++ Sbjct: 61 NEIVFTSGGTEANNFAIKGVAWQYQRRGRHIITTKIEHPSVAEPCRQLEELGFEVTYLPV 120 Query: 121 TGTGIVXXXXXXXXXXXXTVLVSVMHVNNEIGTVQPLREIGQGIKAVNRRTLFHVDGVQG 180 G V T+LVSVMHVNNE+GTVQP+ EIG + + +TLFHVD VQG Sbjct: 121 DREGRVSVEQVERALRDDTILVSVMHVNNEVGTVQPIEEIG-ALLSRYPKTLFHVDRVQG 179 Query: 181 YGKLETRLKEWQAELYSLSPHKIRGPRGTGILVVREGTALFPLLTGGSHENGNRAGTENV 240 K+ LK+ +L ++S HK G RG G+L VREG L PL+ GG E R+GTENV Sbjct: 180 ISKVPLDLKQAGVDLCTISAHKFHGLRGAGLLYVREGVRLAPLIAGGGQERQLRSGTENV 239 Query: 241 AGIVASAKAVRMSGERREELVRRLIPLRNRLLHFIAAMPELVLNSREDG-APHIVHFSYP 299 A IVA AKA+R++ ER E + RL L++ L + A+P++ +N+ DG APHI++FS Sbjct: 240 AAIVAMAKALRLALERYERDIGRLQALKDEWLEALLAIPDIEINTPRDGAAPHIINFSLK 299 Query: 300 -GMKGEVLARKLEELGMTVSTRSACSSRLAEPSRILLSMGRDVPAALGGIRISLGDIHTE 358 G+K EV +LE+ G+ VST SACSS+ PS+ LL+MG A GIRISL ++ Sbjct: 300 RGVKPEVFVHELEKSGIYVSTTSACSSKKKAPSKTLLAMGLGEDRAERGIRISLSFDNSR 359 Query: 359 ADVALLEQALLTAVLSLKK 377 ++A A+ A+ +L + Sbjct: 360 EEIAPAVAAIKQAIKTLSE 378 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.134 0.383 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 2,043,296,803 Number of extensions: 81619496 Number of successful extensions: 210458 Number of sequences better than 1.0e-05: 3953 Number of HSP's gapped: 200978 Number of HSP's successfully gapped: 3974 Length of query: 383 Length of database: 3,060,696,203 Length adjustment: 137 Effective length of query: 246 Effective length of database: 1,770,017,148 Effective search space: 435424218408 Effective search space used: 435424218408 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 132 (55.5 bits)