BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0172.0003.p (151 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value C0ZGE7.1 C0ZGE7_BREBN Putative uncharacterized protein 149 6e-35 B7GGM9.1 B7GGM9_ANOFW Uncharacterized protein conserved in bacteria 143 4e-33 Q9K9L5.1 Q9K9L5_BACHD BH2630 protein 142 8e-33 A8VYT0.1 A8VYT0_9BACI Glycosyl transferase, group 1 137 2e-31 C5D854.1 C5D854_9BACI Pyridoxamine 5'-phosphate oxidase-related ... 136 6e-31 >C0ZGE7.1 C0ZGE7_BREBN Putative uncharacterized protein Length = 152 Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 70/151 (46%), Positives = 103/151 (68%), Gaps = 1/151 (0%) Query: 1 MSEAVAQ-LNETLLTMLQSETFVLLNTVDAETGGPTSTAISWIYAVSPSIVRLAVDHRSR 59 M+E V+Q L+E L +LQ E FV L TVD E+G P+ +++SW +AVS +R AVD+RSR Sbjct: 1 MAETVSQTLSEDLFKLLQKERFVTLGTVDHESGAPSLSSLSWTFAVSADTIRFAVDNRSR 60 Query: 60 LVNNMKVNPLVTITVFGEGTVHAINGRALVRQDPLPDVPFKMCCFDVEIEAVRNALFYGA 119 ++ N+ P V + + G G+ AINGRA+V+ D L VP K+ +++IEAVR+ +FYG+ Sbjct: 61 ILANIAKEPQVVLHLIGAGSSFAINGRAVVKTDRLEGVPLKLAMVEIKIEAVRDIMFYGS 120 Query: 120 QLESAPKYAKVYDARAAEKLDGQVFAAMQKA 150 ++ + P+Y K YD AA KLD QV A++ A Sbjct: 121 RISAEPQYEKTYDKNAAAKLDNQVMTALKDA 151 >B7GGM9.1 B7GGM9_ANOFW Uncharacterized protein conserved in bacteria Length = 151 Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust. Identities = 66/143 (46%), Positives = 98/143 (68%) Query: 8 LNETLLTMLQSETFVLLNTVDAETGGPTSTAISWIYAVSPSIVRLAVDHRSRLVNNMKVN 67 L E L LQ E +V++ T+D ETG P ++AISW+YA +P V AVD RSR+V N+K N Sbjct: 9 LIEPLFQALQKERYVIVCTIDHETGAPNASAISWVYAPAPDKVYFAVDQRSRIVANVKAN 68 Query: 68 PLVTITVFGEGTVHAINGRALVRQDPLPDVPFKMCCFDVEIEAVRNALFYGAQLESAPKY 127 P ++I + + ++I+G+A V+ + L +VP K+ V+IE VR+ +FYGA++ PKY Sbjct: 69 PAISIVLIANESTYSISGKAHVKVEKLENVPLKLAAVQVDIEEVRDIMFYGAKMSVEPKY 128 Query: 128 AKVYDARAAEKLDGQVFAAMQKA 150 K YDA+AA KLD QV +A+++A Sbjct: 129 DKTYDAQAAAKLDQQVMSALKQA 151 >Q9K9L5.1 Q9K9L5_BACHD BH2630 protein Length = 151 Score = 142 bits (359), Expect = 8e-33, Method: Compositional matrix adjust. Identities = 68/143 (47%), Positives = 98/143 (68%) Query: 8 LNETLLTMLQSETFVLLNTVDAETGGPTSTAISWIYAVSPSIVRLAVDHRSRLVNNMKVN 67 L + LL +L+ E FV L+TVD ETG P AISW++A + VR+AVD+RSR+V N+K Sbjct: 9 LTDELLPLLKGERFVTLSTVDWETGAPIVRAISWVFAPANDRVRMAVDNRSRIVANVKKT 68 Query: 68 PLVTITVFGEGTVHAINGRALVRQDPLPDVPFKMCCFDVEIEAVRNALFYGAQLESAPKY 127 P VT+ + G G+ ++I+G A + ++ L +VP K+ ++ I VR+ +FYGA++ S P Y Sbjct: 69 PAVTLLLVGNGSAYSISGHATIVEESLDNVPLKLALIEMNIHEVRDVMFYGAKIVSEPMY 128 Query: 128 AKVYDARAAEKLDGQVFAAMQKA 150 K YD AA KLDGQV AA+Q+A Sbjct: 129 DKTYDEEAAAKLDGQVMAALQQA 151 >A8VYT0.1 A8VYT0_9BACI Glycosyl transferase, group 1 Length = 150 Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 64/142 (45%), Positives = 93/142 (65%) Query: 8 LNETLLTMLQSETFVLLNTVDAETGGPTSTAISWIYAVSPSIVRLAVDHRSRLVNNMKVN 67 L + LL +LQ E ++ L+T+D ETG P AISW+YA VR AVD+RSR+V N+K N Sbjct: 9 LTKELLPLLQEERYIALSTIDHETGAPNVNAISWVYAKDEKHVRFAVDNRSRIVENIKEN 68 Query: 68 PLVTITVFGEGTVHAINGRALVRQDPLPDVPFKMCCFDVEIEAVRNALFYGAQLESAPKY 127 LVTI + G G+ ++I G A V ++ + VP K+ ++ + VR+ +FYG+++ + PK+ Sbjct: 69 GLVTILLIGGGSTYSIAGHAKVTEEKMDGVPLKLALVEITVREVRDVMFYGSRIVNEPKF 128 Query: 128 AKVYDARAAEKLDGQVFAAMQK 149 K YD AA+KLD QV AM K Sbjct: 129 EKTYDKEAADKLDRQVMDAMLK 150 >C5D854.1 C5D854_9BACI Pyridoxamine 5'-phosphate oxidase-related FMN-binding Length = 151 Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust. Identities = 60/143 (41%), Positives = 92/143 (64%) Query: 8 LNETLLTMLQSETFVLLNTVDAETGGPTSTAISWIYAVSPSIVRLAVDHRSRLVNNMKVN 67 L E L LQ E FV + T+D ETGGP +AISWIYA + + AVD+RSR++ N++ N Sbjct: 9 LTEPLFQALQKERFVTIATIDHETGGPNVSAISWIYAPNEEHIYFAVDNRSRIIQNIRNN 68 Query: 68 PLVTITVFGEGTVHAINGRALVRQDPLPDVPFKMCCFDVEIEAVRNALFYGAQLESAPKY 127 P + + + + ++I+G+A ++ + + VP K+ D+ I VR+ +FYG+++ PKY Sbjct: 69 PSIVVNIIANESTYSISGKAHIKAEKIEGVPLKLALVDITISEVRDVMFYGSKIVEEPKY 128 Query: 128 AKVYDARAAEKLDGQVFAAMQKA 150 K YDA+AA KLD QV A++ A Sbjct: 129 EKTYDAQAAAKLDNQVMTALRNA 151 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.319 0.131 0.373 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 802,559,417 Number of extensions: 28942757 Number of successful extensions: 67354 Number of sequences better than 1.0e-05: 91 Number of HSP's gapped: 67352 Number of HSP's successfully gapped: 91 Length of query: 151 Length of database: 3,060,696,203 Length adjustment: 113 Effective length of query: 38 Effective length of database: 1,996,121,508 Effective search space: 75852617304 Effective search space used: 75852617304 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 125 (52.8 bits)