BLASTP 2.2.18 [Mar-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0171.0008.p (257 letters) Database: pfamseq 9,421,015 sequences; 3,060,696,203 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value B3KFM9.1 B3KFM9_9BACI HAD-superfamily hydrolase, subfamily IA, v... 276 1e-72 C3BQ99.1 C3BQ99_9BACI HAD-superfamily hydrolase, subfamily IA, v... 97 2e-18 C3B8B9.1 C3B8B9_BACMY HAD-superfamily hydrolase, subfamily IA, v... 96 3e-18 C3AQX1.1 C3AQX1_BACMY HAD-superfamily hydrolase, subfamily IA, v... 94 1e-17 A4EIS9.1 A4EIS9_9RHOB Putative phosphatase 86 4e-15 >B3KFM9.1 B3KFM9_9BACI HAD-superfamily hydrolase, subfamily IA, variant 3 Length = 255 Score = 276 bits (706), Expect = 1e-72, Method: Compositional matrix adjust. Identities = 136/254 (53%), Positives = 177/254 (69%), Gaps = 4/254 (1%) Query: 1 MAVLHVNDLAIPCKGILFDKDGTLLDLLATWGTWADLMLKGLENQLALIGKDNSGPGPGL 60 M + + +PC+GILFDKDGTLL +A WG WAD +L+ +E +L L+G + P Sbjct: 1 MPFVQLKGRTVPCQGILFDKDGTLLHFMALWGGWADYVLEFMEERLELMGSGFTLPK--- 57 Query: 61 ARVLGTVHDDAGRVIGYDPAGPLSMATAEETNGILAWQLYTAGVPWNEAIARVTAIGKEA 120 +VLGT HD GRV GYD GPL+M T EETNG+LAWQLY AG+PWNEAI +V I K A Sbjct: 58 EKVLGTKHDAGGRVSGYDLRGPLAMGTVEETNGLLAWQLYAAGMPWNEAIVQVHQITKNA 117 Query: 121 LNELRRLRAAHPLPELLPFLRQCAAASLKLGVVTSDGAVTTGEQLEWMGITGYFDTVVTR 180 + E+R+ + A P+P L FL +C+ AS+K+ VVTSD EQLEWMG+ YF ++ R Sbjct: 118 MYEVRQRKPAFPMPGLEHFLEKCSLASVKMAVVTSDQTSGAVEQLEWMGLRSYFTVIMGR 177 Query: 181 ERVTHGKPAPEMAETACRELGLDPEEAVIIGDSNADMQLGKGAGLRLSIGI-SPAGSAAH 239 ++V +GKP PEM E ACR LG+ PEEAV+IGDSNADMQ+ K AG L++G+ + G AH Sbjct: 178 DQVRNGKPHPEMTEAACRRLGIKPEEAVVIGDSNADMQMAKQAGAALAVGLMTDEGEPAH 237 Query: 240 LLEADTVISGYHQL 253 L +AD VIS Y++L Sbjct: 238 LTDADVVISDYNEL 251 >C3BQ99.1 C3BQ99_9BACI HAD-superfamily hydrolase, subfamily IA, variant 3 Length = 251 Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 76/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%) Query: 1 MAVLHVNDLAIPCKGILFDKDGTLLDLLATWGTWADLMLKGLENQLALIGKDNSGPGPGL 60 M + ++ I K I FDKDGTL + W D M K +Q+ +GK P Sbjct: 1 MGKIQISGEVIETKAIAFDKDGTLFHAIPFWQE-IDRMRKYKFSQI--VGKKYE---PLW 54 Query: 61 ARVLGTVHDDAGRVIGYDPAGPLSMATAEETNGILAWQLYT-AGVPWNEAIARVTAIGKE 119 + +G V + D G L++A+ EE ++A LY PW+ T I +E Sbjct: 55 EKAVGFVPPNK-----VDFKGLLAVASEEEEIIVVASLLYQIKKYPWHRCKELATTIFEE 109 Query: 120 ALNELRRLRAAHPLPELLPFLRQCAAASLKLGVVTSDGAVTTGEQLEWMGITGYFDTVVT 179 + +L +A HP+ + + + G++TSD V T + ++ + I + T Sbjct: 110 SNEQLSIEQAFHPIQGITECIISLQKEEIYTGILTSDNKVRTKKCIDLLNIPS-LQFLFT 168 Query: 180 RERVTHGKPAPEMAETACRELGLDPEEAVIIGDSNADMQLGKGAGLRLSIGISPAGSAAH 239 E V +GKP PEM AC +L + P E V+IGD+ D+++ K AG +++GI+ A Sbjct: 169 PEDVENGKPHPEMITKACEQLDIRPNELVMIGDTVVDVKMAKEAG-SIAVGIANHEHAIK 227 Query: 240 LLE--ADTVISGYHQLRL 255 L AD +I+ Y+ +++ Sbjct: 228 ELTPYADFIITDYNDIQV 245 >C3B8B9.1 C3B8B9_BACMY HAD-superfamily hydrolase, subfamily IA, variant 3 Length = 261 Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 75/258 (29%), Positives = 125/258 (48%), Gaps = 16/258 (6%) Query: 1 MAVLHVNDLAIPCKGILFDKDGTLLDLLATWGTWADLMLKGLENQLALIGKDNSGPGPGL 60 M + ++ I K + FDKDGTL W D + K +Q+ +GK GP Sbjct: 1 MGKIQISGKIIETKAVAFDKDGTLFQATPFWQE-IDRLRKSKFSQV--VGKKY---GPLW 54 Query: 61 ARVLGTVHDDAGRVIGYDPAGPLSMATAEETNGILAWQLYT-AGVPWNEAIARVTAIGKE 119 + +G V + D G L++A+ EE ++A LY PW+ T I +E Sbjct: 55 EKAVGFVPPNQ-----VDFKGLLAVASEEEEIIVVASLLYQIKKYPWHRCKELATTIFEE 109 Query: 120 ALNELRRLRAAHPLPELLPFLRQCAAASLKLGVVTSDGAVTTGEQLEWMGITGYFDTVVT 179 + +L +A HP+ + + + G++TSD V T + ++ + I F + T Sbjct: 110 SNEQLSIEQAFHPIQGVTECIISLQKEGIYTGILTSDNKVRTKKCIDLLNIPS-FQFLFT 168 Query: 180 RERVTHGKPAPEMAETACRELGLDPEEAVIIGDSNADMQLGKGAGLRLSIGISPAGSAAH 239 E V +GKP PEM AC +L + E V+IGD+ D+++ K AG +++GI+ A Sbjct: 169 PEDVENGKPYPEMITKACEQLAIKSNELVMIGDTVVDVKMAKDAG-SIAVGIANHEHAIK 227 Query: 240 LLE--ADTVISGYHQLRL 255 L AD +I+ Y+ +++ Sbjct: 228 ELTPYADFIITDYNDIQV 245 >C3AQX1.1 C3AQX1_BACMY HAD-superfamily hydrolase, subfamily IA, variant 3 Length = 261 Score = 94.0 bits (232), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 74/258 (28%), Positives = 124/258 (48%), Gaps = 16/258 (6%) Query: 1 MAVLHVNDLAIPCKGILFDKDGTLLDLLATWGTWADLMLKGLENQLALIGKDNSGPGPGL 60 M + ++ I K + FDKDGTL W D + K +Q+ +GK P Sbjct: 1 MGKIQISGKIIETKAVAFDKDGTLFQATPFWQE-IDRLRKSKFSQV--VGKKYE---PLW 54 Query: 61 ARVLGTVHDDAGRVIGYDPAGPLSMATAEETNGILAWQLYT-AGVPWNEAIARVTAIGKE 119 + +G V + D G L++A+ EE ++A LY PW+ T I +E Sbjct: 55 EKAVGFVPPNQ-----VDFKGLLAVASEEEEIIVVASLLYQIKKYPWHRCKELATTIFEE 109 Query: 120 ALNELRRLRAAHPLPELLPFLRQCAAASLKLGVVTSDGAVTTGEQLEWMGITGYFDTVVT 179 + +L +A HP+ + + + G++TSD V T + ++ + I F + T Sbjct: 110 SNEQLSIEQAFHPIQGVTECIISLQKEGIYTGILTSDNKVRTKKCIDLLNIPS-FQFLFT 168 Query: 180 RERVTHGKPAPEMAETACRELGLDPEEAVIIGDSNADMQLGKGAGLRLSIGISPAGSAAH 239 E V +GKP PEM AC +L + E V+IGD+ D+++ K AG +++GI+ A Sbjct: 169 PEDVENGKPYPEMITKACEQLAIKSNELVMIGDTVVDVKMAKDAG-SIAVGIANHEHAIK 227 Query: 240 LLE--ADTVISGYHQLRL 255 L AD +I+ Y+ +++ Sbjct: 228 ELTPYADFIITDYNDIQV 245 >A4EIS9.1 A4EIS9_9RHOB Putative phosphatase Length = 234 Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 28/221 (12%) Query: 14 KGILFDKDGTLLDLLATWGTWADLMLKGLENQLALIGKDNSGPGPGLARVLGTVHDDAGR 73 KGI+FDKDGTL D ATWGTW ML+ K + LA +G DA + Sbjct: 3 KGIIFDKDGTLFDFNATWGTWTRGMLEAE-------AKGDPAVFDALADAMG-FDVDANQ 54 Query: 74 VIGYDPAGPLSMATAEETNGILAWQLYTAGVPWNEA---IARVTAIGKEALNELRRLRAA 130 + P + AT +ET + + +P + +AR+ A A ++ ++ A Sbjct: 55 ---FRPDSIVIAATVDETADCI-----LSAIPDKDKDALLARMNA----ATAQVTQVEAV 102 Query: 131 HPLPELLPFLRQCAAASLKLGVVTSDGAVTTGEQLEWMGITGYFDTVVTRERVTHGKPAP 190 PL + + AA L+LG+ T+D L+ G+TG+F+ + + GKPAP Sbjct: 103 -PLAD---YFSGLAALGLRLGIATNDAEAPARAHLDRAGVTGHFEFIAGYDSGHGGKPAP 158 Query: 191 EMAETACRELGLDPEEAVIIGDSNADMQLGKGAGLRLSIGI 231 C GLD +++GDS D+ G+ AG+R ++G+ Sbjct: 159 GQLHAFCAHTGLDATNCLMVGDSTHDLHAGQAAGMR-TVGV 198 Database: pfamseq Posted date: Aug 5, 2010 3:22 PM Number of letters in database: 3,060,696,203 Number of sequences in database: 9,421,015 Lambda K H 0.318 0.136 0.410 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 9421015 Number of Hits to DB: 1,666,295,494 Number of extensions: 73447254 Number of successful extensions: 227774 Number of sequences better than 1.0e-05: 584 Number of HSP's gapped: 228156 Number of HSP's successfully gapped: 584 Length of query: 257 Length of database: 3,060,696,203 Length adjustment: 133 Effective length of query: 124 Effective length of database: 1,807,701,208 Effective search space: 224154949792 Effective search space used: 224154949792 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 130 (54.7 bits)